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The map label for this gene is accD [C]

Identifier: 83720131

GI number: 83720131

Start: 3216563

End: 3217510

Strand: Reverse

Name: accD [C]

Synonym: BTH_I2801

Alternate gene names: 83720131

Gene position: 3217510-3216563 (Counterclockwise)

Preceding gene: 83720876

Following gene: 83721036

Centisome position: 84.47

GC content: 75.21

Gene sequence:

>948_bases
ATGAACGCGGCCGCCACGACCCTGCATCCGAAGGTCGCGCCGGCGGGCGCGAGCTGGTTCGAGGCGTCGGCGCGGCAGCG
GCTCGCGGGGCTCGTCGACGCCGGTTCGTTCGACGAGTTCGCGGGCCCGCCCGCGCGGCTCGCGAGCCCGCATCTGCCGC
TGTTCGATTTGCCGCAGCAGTTCGACGACGGGATGATCGTCGGCCGCGCGACGCTCGCCAGCGAGCCCGTGTTCGTCGCC
GCGCAGGAAGGGCGTTTCATGGGCGGCGCGTTCGGCGAGGTGCACGGCGCGAAGCTCGTGGGCCTGCTGCGCGCGGCGCG
CGAGCTGCGCTCGACGCCCGTGCTGATCCTGTTCGACACGGGCGGCGTGCGGCTGCAGGAGGCGAACGCGGGCGAGATCG
CGGTGTCCGAGATCGTCCGCGCGGTGATCGACGCGCGTGCGGCGGGCGTGCCCGTCGTCGGGCTCGTCGGCGGGCGCGCG
GGCTGCTTCGGCGGCGGCGGGATCATCGCCGCGTGCTGCTCGGCGCTCGCGGTGTCGGAGCCGGGGCGCATCGGCGTGTC
CGGGCCGGAGGTGATCGAAAGCCGGCGCGGCGTCGACGAGTTCGATTCGCGCGATCGCGCGCTCGTCTGGCGCACGATGG
GCGGCAAGCATCGGCGGCTCGTCGGCGGCGCCGAGCGCTTCGTCGACGATGCGATCGACGCGTTTCGCGACGCGGCCGTC
GCGCTTCTCGCGCGTGTGCGCGCGGGTGTGACGTTCGGCGCGGCGACGCTCGAAGCGGAGCACGCGCGGCTTGCCGGGCG
CGTCGCGCGCTTTCGCGGATGCGACGACGCGCTCGACGTGTGGCGCGCGCTCGGCGCGCCCGAGGCGAACGCGATTCCCG
CGCTCGACGCCGCCGCGTTCGCGGCGCTGGCCGACCGGCTGACGGAGGTGCGCGATGACGCTCGATGA

Upstream 100 bases:

>100_bases
CGGGCGGGCTGCGGCTGTCCGTCAACGACGGCGGCGCGCGGCCCGACATGGTGTCGCTGCGGCTCGCGCAGGCGGTGCGC
GCGATCGAGGCAGACGCGCG

Downstream 100 bases:

>100_bases
TGTGTTGGCTTCGCTGTTTCCGTCGGGGCACGACGTCACGGTCGATGCCGATGGCCTGCTCGCCGGGAGCGGACGGCTCG
CGGGGCGCGCGGTCGACGTG

Product: malonate decarboxylase subunit beta

Products: NA

Alternate protein names: Transcarboxylase 12S subunit [H]

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MNAAATTLHPKVAPAGASWFEASARQRLAGLVDAGSFDEFAGPPARLASPHLPLFDLPQQFDDGMIVGRATLASEPVFVA
AQEGRFMGGAFGEVHGAKLVGLLRAARELRSTPVLILFDTGGVRLQEANAGEIAVSEIVRAVIDARAAGVPVVGLVGGRA
GCFGGGGIIAACCSALAVSEPGRIGVSGPEVIESRRGVDEFDSRDRALVWRTMGGKHRRLVGGAERFVDDAIDAFRDAAV
ALLARVRAGVTFGAATLEAEHARLAGRVARFRGCDDALDVWRALGAPEANAIPALDAAAFAALADRLTEVRDDAR

Sequences:

>Translated_315_residues
MNAAATTLHPKVAPAGASWFEASARQRLAGLVDAGSFDEFAGPPARLASPHLPLFDLPQQFDDGMIVGRATLASEPVFVA
AQEGRFMGGAFGEVHGAKLVGLLRAARELRSTPVLILFDTGGVRLQEANAGEIAVSEIVRAVIDARAAGVPVVGLVGGRA
GCFGGGGIIAACCSALAVSEPGRIGVSGPEVIESRRGVDEFDSRDRALVWRTMGGKHRRLVGGAERFVDDAIDAFRDAAV
ALLARVRAGVTFGAATLEAEHARLAGRVARFRGCDDALDVWRALGAPEANAIPALDAAAFAALADRLTEVRDDAR
>Mature_315_residues
MNAAATTLHPKVAPAGASWFEASARQRLAGLVDAGSFDEFAGPPARLASPHLPLFDLPQQFDDGMIVGRATLASEPVFVA
AQEGRFMGGAFGEVHGAKLVGLLRAARELRSTPVLILFDTGGVRLQEANAGEIAVSEIVRAVIDARAAGVPVVGLVGGRA
GCFGGGGIIAACCSALAVSEPGRIGVSGPEVIESRRGVDEFDSRDRALVWRTMGGKHRRLVGGAERFVDDAIDAFRDAAV
ALLARVRAGVTFGAATLEAEHARLAGRVARFRGCDDALDVWRALGAPEANAIPALDAAAFAALADRLTEVRDDAR

Specific function: The 12S subunit specifically catalyzes the transfer of the carboxyl group of methylmalonyl CoA to the biotin of the 1.3S subunit forming propanoyl-CoA and carboxylated 1.3S-biotin [H]

COG id: COG0777

COG function: function code I; Acetyl-CoA carboxylase beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 carboxyltransferase domain [H]

Homologues:

Organism=Escherichia coli, GI1788655, Length=198, Percent_Identity=28.2828282828283, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000438
- InterPro:   IPR000022
- InterPro:   IPR011763
- InterPro:   IPR011762 [H]

Pfam domain/function: PF01039 Carboxyl_trans [H]

EC number: =2.1.3.1 [H]

Molecular weight: Translated: 32711; Mature: 32711

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: PS50980 COA_CT_NTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAAATTLHPKVAPAGASWFEASARQRLAGLVDAGSFDEFAGPPARLASPHLPLFDLPQQ
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHCCCCCCCCCCCHH
FDDGMIVGRATLASEPVFVAAQEGRFMGGAFGEVHGAKLVGLLRAARELRSTPVLILFDT
CCCCEEEEEHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECC
GGVRLQEANAGEIAVSEIVRAVIDARAAGVPVVGLVGGRAGCFGGGGIIAACCSALAVSE
CCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCC
PGRIGVSGPEVIESRRGVDEFDSRDRALVWRTMGGKHRRLVGGAERFVDDAIDAFRDAAV
CCCCCCCCHHHHHHHCCCCHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ALLARVRAGVTFGAATLEAEHARLAGRVARFRGCDDALDVWRALGAPEANAIPALDAAAF
HHHHHHHHCCEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHH
AALADRLTEVRDDAR
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MNAAATTLHPKVAPAGASWFEASARQRLAGLVDAGSFDEFAGPPARLASPHLPLFDLPQQ
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHCCCCCCCCCCCHH
FDDGMIVGRATLASEPVFVAAQEGRFMGGAFGEVHGAKLVGLLRAARELRSTPVLILFDT
CCCCEEEEEHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECC
GGVRLQEANAGEIAVSEIVRAVIDARAAGVPVVGLVGGRAGCFGGGGIIAACCSALAVSE
CCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCC
PGRIGVSGPEVIESRRGVDEFDSRDRALVWRTMGGKHRRLVGGAERFVDDAIDAFRDAAV
CCCCCCCCHHHHHHHCCCCHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ALLARVRAGVTFGAATLEAEHARLAGRVARFRGCDDALDVWRALGAPEANAIPALDAAAF
HHHHHHHHCCEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHH
AALADRLTEVRDDAR
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8366018 [H]