| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is nudH [C]
Identifier: 83720078
GI number: 83720078
Start: 3042784
End: 3043260
Strand: Reverse
Name: nudH [C]
Synonym: BTH_I2666
Alternate gene names: 83720078
Gene position: 3043260-3042784 (Counterclockwise)
Preceding gene: 83719335
Following gene: 83720797
Centisome position: 79.89
GC content: 71.28
Gene sequence:
>477_bases ATGAGCGCGACGAAGCCGCGGGGCCGCCCGCGCACGGTGTCGTGCGGGGTCGTGCTGCTCGATTCCGCCGGTCGCGTGCT GCTCGCGCACGCGACCGACACGGCGCACTGGGACATCCCGAAGGGGCAGGGCGAGCCGGGAGAGACCGCGCGGCAGGCGG CGCTGCGCGAGCTCGTCGAGGAGACGGGCATCGTGCTCGATCCTGCTCGCCTCGTCGATCTGGGCCTCTTCGCCTATCGG CACGACAAGGATCTGCACCTGTTCGCCGCGCGCGCCGCGGCCGGCGAGACGGATCTGTCGCGCTGCACGTGCACGTCGAT GTTCCCGAGCCGCCGCGACGGCTCGATGATTCCCGAGATGGACGCGTTTCGCTGGACGGAGCCCGCCGACGTCGACGCGT ATGCGAGCCGCAGCCTCGCGCGGCTCTTCGGCACGACGCTGTCGCTCGAGGAACTGCATCGGGATCTTCCGCGCTGA
Upstream 100 bases:
>100_bases CGAGGCGAAGGGGCAGTCGATGACGCTGCGGCCGCTCTATTGCAAGACCTCGACCGGCAAATGGCAGTTGCAGAAGCGCT GACGCGGGCGTGACGCGCGG
Downstream 100 bases:
>100_bases GCGCGACGAGGCGCGCCCGTCGCGCTTGGCATGGTTTTCTTCATGCCTCGTGCTGGCGGGCGGATGCCGGGCCGATGCAT GGCGGCGCGGCTTCGACGCC
Product: NUDIX domain-containing protein
Products: NA
Alternate protein names: Nudix Hydrolase; Phosphohydrolase; NUDIX Family Hydrolase; NUDIX Domain Protein; Hydrolase Nudix Family
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MSATKPRGRPRTVSCGVVLLDSAGRVLLAHATDTAHWDIPKGQGEPGETARQAALRELVEETGIVLDPARLVDLGLFAYR HDKDLHLFAARAAAGETDLSRCTCTSMFPSRRDGSMIPEMDAFRWTEPADVDAYASRSLARLFGTTLSLEELHRDLPR
Sequences:
>Translated_158_residues MSATKPRGRPRTVSCGVVLLDSAGRVLLAHATDTAHWDIPKGQGEPGETARQAALRELVEETGIVLDPARLVDLGLFAYR HDKDLHLFAARAAAGETDLSRCTCTSMFPSRRDGSMIPEMDAFRWTEPADVDAYASRSLARLFGTTLSLEELHRDLPR >Mature_157_residues SATKPRGRPRTVSCGVVLLDSAGRVLLAHATDTAHWDIPKGQGEPGETARQAALRELVEETGIVLDPARLVDLGLFAYRH DKDLHLFAARAAAGETDLSRCTCTSMFPSRRDGSMIPEMDAFRWTEPADVDAYASRSLARLFGTTLSLEELHRDLPR
Specific function: Preferentially Hydrolyzes Diadenosine Penta-Phosphate With ATP As One Of The Reaction Products. Also Able To Hydrolyze Diadenosine Hexa- And Tetra-Phosphate. Has No Activity On Diadenosine Tri-Phosphate, Adp-Ribose, NADH And Udp-Glucose. In The Meningitis
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.6.1.- [C]
Molecular weight: Translated: 17346; Mature: 17215
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATKPRGRPRTVSCGVVLLDSAGRVLLAHATDTAHWDIPKGQGEPGETARQAALRELVE CCCCCCCCCCCEEECCEEEECCCCCEEEEECCCCCEECCCCCCCCCCHHHHHHHHHHHHH ETGIVLDPARLVDLGLFAYRHDKDLHLFAARAAAGETDLSRCTCTSMFPSRRDGSMIPEM HCCCEECHHHHHHHHHHHHCCCCCEEEEEEHHHCCCCCCHHHHHHCCCCCCCCCCCCCCC DAFRWTEPADVDAYASRSLARLFGTTLSLEELHRDLPR CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCC >Mature Secondary Structure SATKPRGRPRTVSCGVVLLDSAGRVLLAHATDTAHWDIPKGQGEPGETARQAALRELVE CCCCCCCCCCEEECCEEEECCCCCEEEEECCCCCEECCCCCCCCCCHHHHHHHHHHHHH ETGIVLDPARLVDLGLFAYRHDKDLHLFAARAAAGETDLSRCTCTSMFPSRRDGSMIPEM HCCCEECHHHHHHHHHHHHCCCCCEEEEEEHHHCCCCCCHHHHHHCCCCCCCCCCCCCCC DAFRWTEPADVDAYASRSLARLFGTTLSLEELHRDLPR CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA