| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is dgk [H]
Identifier: 83720017
GI number: 83720017
Start: 1473089
End: 1473814
Strand: Reverse
Name: dgk [H]
Synonym: BTH_I1312
Alternate gene names: 83720017
Gene position: 1473814-1473089 (Counterclockwise)
Preceding gene: 83719979
Following gene: 83720952
Centisome position: 38.69
GC content: 67.77
Gene sequence:
>726_bases GTGCCTGGCGATGCGGGCCGCCGCCGAAAAGAACCGCTGCCGATGAACTCGACACCGCTTACCGTCACCGCCCCCGACTG GCGGCCGCCGTGCCGCTACCTCGCGATCGAAGGGCCGATCGGCGTCGGCAAGACGACGCTCGCGACGCTGCTCGCCGAAC GCTGGTCGATGCGTGCGCTGCTCGAACGCCCGCAGGACAACCCGTTTCTCGAACGCTTCTATCGCGACACCGCGCGCTAC GCGCTGCCGACGCAGCTCGCGTTCGCGCTGCAGCGCGAACGCCAGGCGGGCGAGATCGCCGCGGCTTACGAAGCAAACAT GCCGATCGTCGCGGATTTCATGCCGCAGAAGAACGAAATCTTCGCGCGGCTCACGCTACCCGACGACGAGTGGCAGCTGT ACCGCTCGCTCGCCGCGCACCTCGCCGCGCCGGCGCCCGCGCCCGACCTCGTCGTCTACCTGCAGGCGAGCCCCGAAGTG CTGTTTTCGCGAATCCAGAAGCGCGGCGAGCCGATGGAACTGCAGATCGGCGACGCGTACCTGCGCTCGCTCTGCGACGC ATACAACGAATTCTTCTATCACTACGACCGCACGCCCGTGCTGACGGTCGCCGCCGAGCACCTGAACCCGCTCGACTCCC CCGACGATCTTGCGCTGCTCGTCGATCGCATCGCGTCGATGCGCGGGCGCAAGGAATTCTTCGTCAAGGGCGGCAGCGCG CGCTGA
Upstream 100 bases:
>100_bases TCGAGATCGAGCCGACTCTCGCCATTCCCGCGCGCGGCCGCGCCGACGAATTCCTCGCCGGCGTCGCGCATCAGCGCATC GAGAAAGTCCAGACCTGCCA
Downstream 100 bases:
>100_bases CCGACGCGCGCACCGTCGCCGAGCGCGGCGCCGCCCTTTTCCTCACCATCGAATCGGACCTCCCATGACCTACCTTCAGG AATCCAGCCGACCGGCCGTG
Product: deoxynucleoside kinase family protein
Products: NA
Alternate protein names: DGUO kinase; dGK [H]
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MPGDAGRRRKEPLPMNSTPLTVTAPDWRPPCRYLAIEGPIGVGKTTLATLLAERWSMRALLERPQDNPFLERFYRDTARY ALPTQLAFALQRERQAGEIAAAYEANMPIVADFMPQKNEIFARLTLPDDEWQLYRSLAAHLAAPAPAPDLVVYLQASPEV LFSRIQKRGEPMELQIGDAYLRSLCDAYNEFFYHYDRTPVLTVAAEHLNPLDSPDDLALLVDRIASMRGRKEFFVKGGSA R
Sequences:
>Translated_241_residues MPGDAGRRRKEPLPMNSTPLTVTAPDWRPPCRYLAIEGPIGVGKTTLATLLAERWSMRALLERPQDNPFLERFYRDTARY ALPTQLAFALQRERQAGEIAAAYEANMPIVADFMPQKNEIFARLTLPDDEWQLYRSLAAHLAAPAPAPDLVVYLQASPEV LFSRIQKRGEPMELQIGDAYLRSLCDAYNEFFYHYDRTPVLTVAAEHLNPLDSPDDLALLVDRIASMRGRKEFFVKGGSA R >Mature_240_residues PGDAGRRRKEPLPMNSTPLTVTAPDWRPPCRYLAIEGPIGVGKTTLATLLAERWSMRALLERPQDNPFLERFYRDTARYA LPTQLAFALQRERQAGEIAAAYEANMPIVADFMPQKNEIFARLTLPDDEWQLYRSLAAHLAAPAPAPDLVVYLQASPEVL FSRIQKRGEPMELQIGDAYLRSLCDAYNEFFYHYDRTPVLTVAAEHLNPLDSPDDLALLVDRIASMRGRKEFFVKGGSAR
Specific function: Plays an essential role in generating the deoxyribonucleotide precursors dGTP for DNA metabolism. Highly specific toward deoxyguanosine (dGuo) and deoxyinosine (dIno). Only marginal activity is observed with guanosine. UTP is slightly more efficient as ph
COG id: COG1428
COG function: function code F; Deoxynucleoside kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DCK/DGK family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002624 [H]
Pfam domain/function: PF01712 dNK [H]
EC number: =2.7.1.113 [H]
Molecular weight: Translated: 27250; Mature: 27118
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGDAGRRRKEPLPMNSTPLTVTAPDWRPPCRYLAIEGPIGVGKTTLATLLAERWSMRAL CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH LERPQDNPFLERFYRDTARYALPTQLAFALQRERQAGEIAAAYEANMPIVADFMPQKNEI HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEECCCCCCCE FARLTLPDDEWQLYRSLAAHLAAPAPAPDLVVYLQASPEVLFSRIQKRGEPMELQIGDAY EEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHCCCCEEEEECHHH LRSLCDAYNEFFYHYDRTPVLTVAAEHLNPLDSPDDLALLVDRIASMRGRKEFFVKGGSA HHHHHHHHHHHHHHCCCCCCEEEEHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCC R C >Mature Secondary Structure PGDAGRRRKEPLPMNSTPLTVTAPDWRPPCRYLAIEGPIGVGKTTLATLLAERWSMRAL CCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH LERPQDNPFLERFYRDTARYALPTQLAFALQRERQAGEIAAAYEANMPIVADFMPQKNEI HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEECCCCCCCE FARLTLPDDEWQLYRSLAAHLAAPAPAPDLVVYLQASPEVLFSRIQKRGEPMELQIGDAY EEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHCCCCEEEEECHHH LRSLCDAYNEFFYHYDRTPVLTVAAEHLNPLDSPDDLALLVDRIASMRGRKEFFVKGGSA HHHHHHHHHHHHHHCCCCCCEEEEHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]