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The map label for this gene is rng [H]

Identifier: 83719989

GI number: 83719989

Start: 1145568

End: 1147094

Strand: Reverse

Name: rng [H]

Synonym: BTH_I1008

Alternate gene names: 83719989

Gene position: 1147094-1145568 (Counterclockwise)

Preceding gene: 83720792

Following gene: 83720121

Centisome position: 30.11

GC content: 66.34

Gene sequence:

>1527_bases
TTGAGGCCGCGGCGCTGCTGCGCGCGGCGCACGTCGCCTTCTGAACCGCCCTATCGCACCATGAACGAAGAGATCCTGAT
CAACATCACGCCGCAGGAAACGCGGGTCGCGCTCGTCCAACAAGGCGCGGTGCAGGAGCTTCACGTCGAGCGCACGCTGT
CGCGCGGACGCGTCGGCAACATCTATCTCGGCAAGGTCGTGCGCGTTTTGCCGGGCATGCAGTCGGCGTTCATCGACATC
GGGCTCGAGCGCGCGGCGTTCCTGCACGTCGCCGACATCTGGCAGCCGCGCGCGGGCGACGCGCCCGCTGCCGCGGCGCA
CCATCCGATCGAGAAGATCGTGTTCGAGGGCCAGACGCTGATGGTCCAGGTGATCAAGGACCCGATCGGCACGAAGGGCG
CGCGGCTGTCGACGCAGATCAGCATCGCGGGGCGCACCCTCGTCTACCTGCCGCAGGAGCCGCACATCGGCATCTCGCAG
AAGATCGAAAGCGAGGCCGAGCGCGAGGCGGTGCGCGCGCGGCTGACCGCGGTGATCCCGGCCGACGAGAAAGGCGGCTA
CATCGTGCGCACGATCGCCGAGGACGCGACGTCCGACGAGCTCGCCGCCGACGTCGCGTACCTGCGCAAGACGTGGGCGA
CGATCGTCGCGCAGGGCCAGCGGGTGCCGCCGACGAGCCTGCTGTATCAGGATCTCGACCTCGCGCAGCGTGTGCTGCGC
GACTTCGCGAACGACGACACGACGCGCATCCAGGTCGATTCGCGCGAGACGCACCAGCGGCTCGTCGATTTCGCGGCCGA
GTTCACGCCGGCCGTGAGCCCGAAGCTGCACCACTACACCGGCGAGCGGCCGCTGTTCGACCTGTACAACATCGAGGCCG
AGATCCAGCGCGCGCTGTCGCGCCGCGTCGACCTGAAGTCGGGCGGCTACCTGATGATCGACCAGACGGAAGCGATGACG
ACGATCGACGTGAACACGGGCGGCTACGTCGGCGCGCGCAACTTCGACGACACGATCTTCAAGACGAATCTCGAGGCGGC
GCACACGATCGCGCGGCAGCTTCGGCTGCGCAATCTCGGCGGGATCATCATCATCGATTTCATCGACATGGAGAACGCCG
AGCATCGCGACGCGGTGCTCGCCGAGCTGAAGAAGGCGCTCTCGCGCGACCGCACGCGCGTGACGGTGAACACCTTCTCG
CAGTTGGGGCTCGTCGAGATGACGCGCAAGCGCACGCGCGAATCGCTCGCGCACGTGCTGTGCGAGCCTTGCCCGACGTG
CCAGGGCAAGGGCCAGGTGAAGACGTCGCGCACCGTGTGCTACGACATCCTGCGCGAGATCCTGCGCGAGTCGCGGCAAT
TCAATCCGCGCGAGTTTCGCGTGATCGCGTCGCAGCAGGTGATCGACCTCTTTCTCGACGAGGAGTCGCAGCATCTCGCG
ATGCTGATCGACTTCATCGGCAAGCCGGTGTCGTTGCAGGTGGAGTCGAATTTGAGTCAGGAGCAGTACGACATCGTGCT
GATGTAG

Upstream 100 bases:

>100_bases
CCGTTCGGCAAGGCGGGCGCGTACGCGATCCAGGGGCGCGCGGCCGAATTCGTCGAGCGAATCGACGGCTCCCATTCAGG
TATCATGGGTCTGCCCCTTT

Downstream 100 bases:

>100_bases
GCCTGTCCGGCCGCACCGCGCTTACGCCCGACGCCTCGCGCGGCGGCGCGGCCCGATCCCCGCTGCGCACGCGGCCGCCA
TCGATGCCGGTGATGCGCCG

Product: ribonuclease G

Products: NA

Alternate protein names: RNase G; Cytoplasmic axial filament protein [H]

Number of amino acids: Translated: 508; Mature: 508

Protein sequence:

>508_residues
MRPRRCCARRTSPSEPPYRTMNEEILINITPQETRVALVQQGAVQELHVERTLSRGRVGNIYLGKVVRVLPGMQSAFIDI
GLERAAFLHVADIWQPRAGDAPAAAAHHPIEKIVFEGQTLMVQVIKDPIGTKGARLSTQISIAGRTLVYLPQEPHIGISQ
KIESEAEREAVRARLTAVIPADEKGGYIVRTIAEDATSDELAADVAYLRKTWATIVAQGQRVPPTSLLYQDLDLAQRVLR
DFANDDTTRIQVDSRETHQRLVDFAAEFTPAVSPKLHHYTGERPLFDLYNIEAEIQRALSRRVDLKSGGYLMIDQTEAMT
TIDVNTGGYVGARNFDDTIFKTNLEAAHTIARQLRLRNLGGIIIIDFIDMENAEHRDAVLAELKKALSRDRTRVTVNTFS
QLGLVEMTRKRTRESLAHVLCEPCPTCQGKGQVKTSRTVCYDILREILRESRQFNPREFRVIASQQVIDLFLDEESQHLA
MLIDFIGKPVSLQVESNLSQEQYDIVLM

Sequences:

>Translated_508_residues
MRPRRCCARRTSPSEPPYRTMNEEILINITPQETRVALVQQGAVQELHVERTLSRGRVGNIYLGKVVRVLPGMQSAFIDI
GLERAAFLHVADIWQPRAGDAPAAAAHHPIEKIVFEGQTLMVQVIKDPIGTKGARLSTQISIAGRTLVYLPQEPHIGISQ
KIESEAEREAVRARLTAVIPADEKGGYIVRTIAEDATSDELAADVAYLRKTWATIVAQGQRVPPTSLLYQDLDLAQRVLR
DFANDDTTRIQVDSRETHQRLVDFAAEFTPAVSPKLHHYTGERPLFDLYNIEAEIQRALSRRVDLKSGGYLMIDQTEAMT
TIDVNTGGYVGARNFDDTIFKTNLEAAHTIARQLRLRNLGGIIIIDFIDMENAEHRDAVLAELKKALSRDRTRVTVNTFS
QLGLVEMTRKRTRESLAHVLCEPCPTCQGKGQVKTSRTVCYDILREILRESRQFNPREFRVIASQQVIDLFLDEESQHLA
MLIDFIGKPVSLQVESNLSQEQYDIVLM
>Mature_508_residues
MRPRRCCARRTSPSEPPYRTMNEEILINITPQETRVALVQQGAVQELHVERTLSRGRVGNIYLGKVVRVLPGMQSAFIDI
GLERAAFLHVADIWQPRAGDAPAAAAHHPIEKIVFEGQTLMVQVIKDPIGTKGARLSTQISIAGRTLVYLPQEPHIGISQ
KIESEAEREAVRARLTAVIPADEKGGYIVRTIAEDATSDELAADVAYLRKTWATIVAQGQRVPPTSLLYQDLDLAQRVLR
DFANDDTTRIQVDSRETHQRLVDFAAEFTPAVSPKLHHYTGERPLFDLYNIEAEIQRALSRRVDLKSGGYLMIDQTEAMT
TIDVNTGGYVGARNFDDTIFKTNLEAAHTIARQLRLRNLGGIIIIDFIDMENAEHRDAVLAELKKALSRDRTRVTVNTFS
QLGLVEMTRKRTRESLAHVLCEPCPTCQGKGQVKTSRTVCYDILREILRESRQFNPREFRVIASQQVIDLFLDEESQHLA
MLIDFIGKPVSLQVESNLSQEQYDIVLM

Specific function: Involved in the processing of the 5'-end of 16S rRNA. Could be involved in chromosome segregation and cell division. It may be one of the components of the cytoplasmic axial filaments bundles or merely regulate the formation of this structure [H]

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: Cytoplasm, cytoskeleton [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Escherichia coli, GI87082235, Length=493, Percent_Identity=55.7809330628803, Blast_Score=536, Evalue=1e-153,
Organism=Escherichia coli, GI1787325, Length=454, Percent_Identity=37.4449339207048, Blast_Score=279, Evalue=4e-76,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR019307
- InterPro:   IPR022967
- InterPro:   IPR004659 [H]

Pfam domain/function: PF10150 RNase_E_G; PF00575 S1 [H]

EC number: 3.1.4.- [C]

Molecular weight: Translated: 57156; Mature: 57156

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPRRCCARRTSPSEPPYRTMNEEILINITPQETRVALVQQGAVQELHVERTLSRGRVGN
CCCHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHCCCCCC
IYLGKVVRVLPGMQSAFIDIGLERAAFLHVADIWQPRAGDAPAAAAHHPIEKIVFEGQTL
CHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHCCCHH
MVQVIKDPIGTKGARLSTQISIAGRTLVYLPQEPHIGISQKIESEAEREAVRARLTAVIP
HHHHHHCCCCCCCCEEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHEEEC
ADEKGGYIVRTIAEDATSDELAADVAYLRKTWATIVAQGQRVPPTSLLYQDLDLAQRVLR
CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
DFANDDTTRIQVDSRETHQRLVDFAAEFTPAVSPKLHHYTGERPLFDLYNIEAEIQRALS
HHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCHHHHCCHHHHHHHHH
RRVDLKSGGYLMIDQTEAMTTIDVNTGGYVGARNFDDTIFKTNLEAAHTIARQLRLRNLG
HCCCCCCCCEEEEECCCCEEEEEECCCCEECCCCCCCHHHHCCHHHHHHHHHHHHHHCCC
GIIIIDFIDMENAEHRDAVLAELKKALSRDRTRVTVNTFSQLGLVEMTRKRTRESLAHVL
CEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH
CEPCPTCQGKGQVKTSRTVCYDILREILRESRQFNPREFRVIASQQVIDLFLDEESQHLA
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHEEEEHHHHHHHHHHCCCCHHHH
MLIDFIGKPVSLQVESNLSQEQYDIVLM
HHHHHHCCCEEEEECCCCCCCCCCEEEC
>Mature Secondary Structure
MRPRRCCARRTSPSEPPYRTMNEEILINITPQETRVALVQQGAVQELHVERTLSRGRVGN
CCCHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHCCCCCC
IYLGKVVRVLPGMQSAFIDIGLERAAFLHVADIWQPRAGDAPAAAAHHPIEKIVFEGQTL
CHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHCCCHH
MVQVIKDPIGTKGARLSTQISIAGRTLVYLPQEPHIGISQKIESEAEREAVRARLTAVIP
HHHHHHCCCCCCCCEEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHEEEC
ADEKGGYIVRTIAEDATSDELAADVAYLRKTWATIVAQGQRVPPTSLLYQDLDLAQRVLR
CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
DFANDDTTRIQVDSRETHQRLVDFAAEFTPAVSPKLHHYTGERPLFDLYNIEAEIQRALS
HHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCHHHHCCHHHHHHHHH
RRVDLKSGGYLMIDQTEAMTTIDVNTGGYVGARNFDDTIFKTNLEAAHTIARQLRLRNLG
HCCCCCCCCEEEEECCCCEEEEEECCCCEECCCCCCCHHHHCCHHHHHHHHHHHHHHCCC
GIIIIDFIDMENAEHRDAVLAELKKALSRDRTRVTVNTFSQLGLVEMTRKRTRESLAHVL
CEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH
CEPCPTCQGKGQVKTSRTVCYDILREILRESRQFNPREFRVIASQQVIDLFLDEESQHLA
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHEEEEHHHHHHHHHHCCCCHHHH
MLIDFIGKPVSLQVESNLSQEQYDIVLM
HHHHHHCCCEEEEECCCCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]