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The map label for this gene is gfcE [H]

Identifier: 83719778

GI number: 83719778

Start: 609293

End: 610582

Strand: Direct

Name: gfcE [H]

Synonym: BTH_I0536

Alternate gene names: 83719778

Gene position: 609293-610582 (Clockwise)

Preceding gene: 83719142

Following gene: 83719256

Centisome position: 16.0

GC content: 67.98

Gene sequence:

>1290_bases
ATGTTCAAGCCCCTAGCATGGGCGAGCGCCGCGGCGCTCGCCTTGTCGGGCTGTGCGCTGGCCCCGGGACCGGCGCTCGA
TTCGAGCCGCATGAACGACAATCTGAGCGCGCCGACGGATTCGACGGTGTACGACGTCAAGCTGATCACACCGCAGCTCG
TCTATACGCTCAAGCAGGCCGACGAGGCCGATACGCGCGCGAAGGAAGCGGGAATCGCGCAGAGCCTGCCCGCCGCGCCC
GCCGACTATCGCGTCGGCCCGGACGACGTGCTCGGCATCATCGTATGGGACCACCCCGAGCTCACGCGCGGCGCAGGAAA
CGGCACGGGCGCCGATACGTCGCCGCTCGCCGACATCGGTACGCTGCAGGCGTCGGGCGGCCTGGGCGGCGTGTTGCCGC
AACAGGTCAGCGCGTTCGGCACGAACGGGCAGGGCGAGGTCGACTCGCCGGGCCAGCGCGTCGCCGCCAACGGCACGATC
TTCTTCCCGACGCTCGGCCGCGTGCGCGTCGAGGGAATGAGCCCCGTGCGGATCGCCGCGCTGCTCGCGCGGCGTCTCGA
CAAGCAGATCAGGAATCCTCAGATCGACGTGCGCGTGATGCAGTACCGAAGCCAGCGCGTGCAGGTGACGGGCGACGTGA
AGAACCCGGGGCAGTTGTCGTTGACGGGCTCGCATCTGCGCGTCGTCGACGCGATCAATCGCGCGGGCGGCGGCAATCCG
GATGCGGATCTGCAGCGCGTGCTCGTCACGCGCGGCGATCAGGTGATGACGATCGACGTGAACCGCATCCTGAATCGCGG
CGATCTGCGCCAGAACATCGTGCTGCAGGCGAACGACATCGTCCATGTGCCCGACCGCACGCAGAACCGCGTGTTCGTGA
TGGGCGAGGTGCCGAAGCCGCAGACGGTCTACATGAACAAGGGGCAGCTTTCGCTCGCGGATGCGCTGAGTGCGGCGGGC
AGCATCGATCCGATGGGGGCGAATCCGCGCCAGGTGATCGTGATCCGTCATCCGGACCCGCCGCTCGCGCAGGCGCCGGG
CGTGCAGAGCGGGTTGCAGGAGGGCCTGAAGAAGGTCAACTACGCGCCTGAGCACAACCGGCCCGAAGTGTTCCGCCTCG
ACATGACGCAGGTGGACGCGCTGATGCTCGCGACCGAGTTCGACATGAAGCCGCTCGACGTCGTGTACGTCGGCACGGCG
CCCGCCGCGCGCTTCAACCGGATGCTCGCGCAGATCCTGCCGACCGCCGAATCGTTCTATCTGATCTGGTCGGTGAGCCG
CGGCCGATGA

Upstream 100 bases:

>100_bases
AGGGATTCGTCGGCCGCAACGCGTTCTGAGCCGGCGCGCGTTCGCTGCGAACGCGCCGCAATCCGCTTCGACGACCACGC
TACCAAGGAGAAACGACAAG

Downstream 100 bases:

>100_bases
TGTGCGCGATCGCGGCGCACGGCGGCATTCGCGCGCCGCACGCCGCGTTGTGCGACGGAGCGCACAGACCGCGCGCGTCG
CAATGGCGACACTGGAATGC

Product: capsular polysaccharide biosynthesis/export periplasmic protein

Products: NA

Alternate protein names: Group 4 capsule protein E homolog [H]

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MFKPLAWASAAALALSGCALAPGPALDSSRMNDNLSAPTDSTVYDVKLITPQLVYTLKQADEADTRAKEAGIAQSLPAAP
ADYRVGPDDVLGIIVWDHPELTRGAGNGTGADTSPLADIGTLQASGGLGGVLPQQVSAFGTNGQGEVDSPGQRVAANGTI
FFPTLGRVRVEGMSPVRIAALLARRLDKQIRNPQIDVRVMQYRSQRVQVTGDVKNPGQLSLTGSHLRVVDAINRAGGGNP
DADLQRVLVTRGDQVMTIDVNRILNRGDLRQNIVLQANDIVHVPDRTQNRVFVMGEVPKPQTVYMNKGQLSLADALSAAG
SIDPMGANPRQVIVIRHPDPPLAQAPGVQSGLQEGLKKVNYAPEHNRPEVFRLDMTQVDALMLATEFDMKPLDVVYVGTA
PAARFNRMLAQILPTAESFYLIWSVSRGR

Sequences:

>Translated_429_residues
MFKPLAWASAAALALSGCALAPGPALDSSRMNDNLSAPTDSTVYDVKLITPQLVYTLKQADEADTRAKEAGIAQSLPAAP
ADYRVGPDDVLGIIVWDHPELTRGAGNGTGADTSPLADIGTLQASGGLGGVLPQQVSAFGTNGQGEVDSPGQRVAANGTI
FFPTLGRVRVEGMSPVRIAALLARRLDKQIRNPQIDVRVMQYRSQRVQVTGDVKNPGQLSLTGSHLRVVDAINRAGGGNP
DADLQRVLVTRGDQVMTIDVNRILNRGDLRQNIVLQANDIVHVPDRTQNRVFVMGEVPKPQTVYMNKGQLSLADALSAAG
SIDPMGANPRQVIVIRHPDPPLAQAPGVQSGLQEGLKKVNYAPEHNRPEVFRLDMTQVDALMLATEFDMKPLDVVYVGTA
PAARFNRMLAQILPTAESFYLIWSVSRGR
>Mature_429_residues
MFKPLAWASAAALALSGCALAPGPALDSSRMNDNLSAPTDSTVYDVKLITPQLVYTLKQADEADTRAKEAGIAQSLPAAP
ADYRVGPDDVLGIIVWDHPELTRGAGNGTGADTSPLADIGTLQASGGLGGVLPQQVSAFGTNGQGEVDSPGQRVAANGTI
FFPTLGRVRVEGMSPVRIAALLARRLDKQIRNPQIDVRVMQYRSQRVQVTGDVKNPGQLSLTGSHLRVVDAINRAGGGNP
DADLQRVLVTRGDQVMTIDVNRILNRGDLRQNIVLQANDIVHVPDRTQNRVFVMGEVPKPQTVYMNKGQLSLADALSAAG
SIDPMGANPRQVIVIRHPDPPLAQAPGVQSGLQEGLKKVNYAPEHNRPEVFRLDMTQVDALMLATEFDMKPLDVVYVGTA
PAARFNRMLAQILPTAESFYLIWSVSRGR

Specific function: May be involved in polysaccharide transport [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

Organism=Escherichia coli, GI1787218, Length=423, Percent_Identity=32.387706855792, Blast_Score=196, Evalue=3e-51,
Organism=Escherichia coli, GI1788376, Length=408, Percent_Identity=32.843137254902, Blast_Score=192, Evalue=4e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715
- InterPro:   IPR019554 [H]

Pfam domain/function: PF02563 Poly_export; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 45951; Mature: 45951

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKPLAWASAAALALSGCALAPGPALDSSRMNDNLSAPTDSTVYDVKLITPQLVYTLKQA
CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHC
DEADTRAKEAGIAQSLPAAPADYRVGPDDVLGIIVWDHPELTRGAGNGTGADTSPLADIG
CCHHHHHHHCCCHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHC
TLQASGGLGGVLPQQVSAFGTNGQGEVDSPGQRVAANGTIFFPTLGRVRVEGMSPVRIAA
EEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEECCEEEEECCCEEEECCCCHHHHHH
LLARRLDKQIRNPQIDVRVMQYRSQRVQVTGDVKNPGQLSLTGSHLRVVDAINRAGGGNP
HHHHHHHHHHCCCCEEEEEEEECCCEEEEEECCCCCCEEEEECCCEEEHHHHHHCCCCCC
DADLQRVLVTRGDQVMTIDVNRILNRGDLRQNIVLQANDIVHVPDRTQNRVFVMGEVPKP
CHHHHHHHHHCCCEEEEEEHHHHHCCCCCCCCEEEEECCEEECCCCCCCEEEEEECCCCC
QTVYMNKGQLSLADALSAAGSIDPMGANPRQVIVIRHPDPPLAQAPGVQSGLQEGLKKVN
CEEEEECCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCC
YAPEHNRPEVFRLDMTQVDALMLATEFDMKPLDVVYVGTAPAARFNRMLAQILPTAESFY
CCCCCCCCCEEEECHHHHHHEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEE
LIWSVSRGR
EEEEECCCC
>Mature Secondary Structure
MFKPLAWASAAALALSGCALAPGPALDSSRMNDNLSAPTDSTVYDVKLITPQLVYTLKQA
CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHC
DEADTRAKEAGIAQSLPAAPADYRVGPDDVLGIIVWDHPELTRGAGNGTGADTSPLADIG
CCHHHHHHHCCCHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHC
TLQASGGLGGVLPQQVSAFGTNGQGEVDSPGQRVAANGTIFFPTLGRVRVEGMSPVRIAA
EEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEECCEEEEECCCEEEECCCCHHHHHH
LLARRLDKQIRNPQIDVRVMQYRSQRVQVTGDVKNPGQLSLTGSHLRVVDAINRAGGGNP
HHHHHHHHHHCCCCEEEEEEEECCCEEEEEECCCCCCEEEEECCCEEEHHHHHHCCCCCC
DADLQRVLVTRGDQVMTIDVNRILNRGDLRQNIVLQANDIVHVPDRTQNRVFVMGEVPKP
CHHHHHHHHHCCCEEEEEEHHHHHCCCCCCCCEEEEECCEEECCCCCCCEEEEEECCCCC
QTVYMNKGQLSLADALSAAGSIDPMGANPRQVIVIRHPDPPLAQAPGVQSGLQEGLKKVN
CEEEEECCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCC
YAPEHNRPEVFRLDMTQVDALMLATEFDMKPLDVVYVGTAPAARFNRMLAQILPTAESFY
CCCCCCCCCEEEECHHHHHHEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEE
LIWSVSRGR
EEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]