| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is cbbF [H]
Identifier: 83719726
GI number: 83719726
Start: 1801792
End: 1802808
Strand: Reverse
Name: cbbF [H]
Synonym: BTH_I1604
Alternate gene names: 83719726
Gene position: 1802808-1801792 (Counterclockwise)
Preceding gene: 83720711
Following gene: 83721194
Centisome position: 47.33
GC content: 65.39
Gene sequence:
>1017_bases ATGTCCATTACCCGACGCACCACGCTGTCCAAGTATCTGATCGAGCAGCAGCGTGAGACCCACAACCTCCCCGCCGACCT GCGCCTGTTGATCGAAGTGGTCGCGCGCGCGTGCAAGGCGATCAGCTACAACGTGAGCAAGGGCGCGTTGGGCGATGCGC TCGGCACGGCGGGCAGCGAGAATGTCCAGGGCGAAGTGCAGAAGAAGCTCGACATCCTGTCGAACGAGATCCTGCTCGAC GCGAACGAATGGGGCGGCAATCTCGCCGCGATGGCGTCGGAGGAAATGGAGACGTTCTTCCCGATCCCGGCGAACTACCC GCGCGGCGAATACCTGCTCGTGTTCGATCCGCTCGACGGCTCGTCGAACATCGACGTGAACGTGTCGATCGGCACGATCT TCTCGGTGCTGCGCTGCCCGGACGGCCAGCAGGCGACCGAGCAATCGTTCCTGCAGCCGGGCACCGAGCAGGTCGCGGCG GGTTACGCGGTGTACGGCCCGCAAACCGTGTTCGTGCTGACGACGGGCAACGGCGTGAACTGCTTCACGCTCGACCGCGA AGTCGGCTCGTGGGTGCTCACGCAAAGCAACCTGCGGATTCCGGAGGACACGCGCGAGTATGCGATCAACGCGTCGAACG CGCGCCACTGGTACGACCCGGTGAAGCGCTACGTCGACGAGCTGAACGCGGGCGCCGAAGGCCCGCGCGGCGAGAACTTC AACATGCGCTGGATCGCCTCGATGGTCGCCGACGTGCACAGGATCCTGAACCGCGGCGGCATCTTCATGTACCCGGCCGA CAAGCGCACGCCGGATCGTCCGGGCAAGCTGCGCCTGATGTACGAAGCGAACCCGATGTCGTTCATCGTCGAGCAGGCGG GCGGCGCGGCGACGACGGGCCTGAAGCGGATCCTCGACGTGCAGCCGACGGGCCTGCACCAGCGCGTGCCGGTGATCCTC GGCTCGAAGAACGAAGTCGAGCGCGTCGCGCGCTATCACCAGGAAGCGCAGTCTTAA
Upstream 100 bases:
>100_bases GTTTTCGGCGAAAAACCGTCTGCGGCCAGCCGCCACGGGTAAAATCGAGCCTATTCCTATCCCAACATCCAACGCATTCG TCAGCCTCTCGGAGTTCCCC
Downstream 100 bases:
>100_bases CGCCACGCAACGGCGGGCGTCGGGGCGCGGCCGCTCGGCGCGCCGCCCCGACCGCAGCGCACGGACGAGCGCGCCGGGCG GCGCACGCGAATGCGCTCGT
Product: fructose-1,6-bisphosphatase
Products: NA
Alternate protein names: FBPase class 1; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 [H]
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MSITRRTTLSKYLIEQQRETHNLPADLRLLIEVVARACKAISYNVSKGALGDALGTAGSENVQGEVQKKLDILSNEILLD ANEWGGNLAAMASEEMETFFPIPANYPRGEYLLVFDPLDGSSNIDVNVSIGTIFSVLRCPDGQQATEQSFLQPGTEQVAA GYAVYGPQTVFVLTTGNGVNCFTLDREVGSWVLTQSNLRIPEDTREYAINASNARHWYDPVKRYVDELNAGAEGPRGENF NMRWIASMVADVHRILNRGGIFMYPADKRTPDRPGKLRLMYEANPMSFIVEQAGGAATTGLKRILDVQPTGLHQRVPVIL GSKNEVERVARYHQEAQS
Sequences:
>Translated_338_residues MSITRRTTLSKYLIEQQRETHNLPADLRLLIEVVARACKAISYNVSKGALGDALGTAGSENVQGEVQKKLDILSNEILLD ANEWGGNLAAMASEEMETFFPIPANYPRGEYLLVFDPLDGSSNIDVNVSIGTIFSVLRCPDGQQATEQSFLQPGTEQVAA GYAVYGPQTVFVLTTGNGVNCFTLDREVGSWVLTQSNLRIPEDTREYAINASNARHWYDPVKRYVDELNAGAEGPRGENF NMRWIASMVADVHRILNRGGIFMYPADKRTPDRPGKLRLMYEANPMSFIVEQAGGAATTGLKRILDVQPTGLHQRVPVIL GSKNEVERVARYHQEAQS >Mature_337_residues SITRRTTLSKYLIEQQRETHNLPADLRLLIEVVARACKAISYNVSKGALGDALGTAGSENVQGEVQKKLDILSNEILLDA NEWGGNLAAMASEEMETFFPIPANYPRGEYLLVFDPLDGSSNIDVNVSIGTIFSVLRCPDGQQATEQSFLQPGTEQVAAG YAVYGPQTVFVLTTGNGVNCFTLDREVGSWVLTQSNLRIPEDTREYAINASNARHWYDPVKRYVDELNAGAEGPRGENFN MRWIASMVADVHRILNRGGIFMYPADKRTPDRPGKLRLMYEANPMSFIVEQAGGAATTGLKRILDVQPTGLHQRVPVILG SKNEVERVARYHQEAQS
Specific function: INVOLVED IN SEVERAL METABOLIC PATHWAYS. IN E.COLI AND YEAST IT IS NECESSARY FOR GROWTH ON SUBSTANCES SUCH AS GLYCEROL, SUCCINATE AND ACETATE. [C]
COG id: COG0158
COG function: function code G; Fructose-1,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FBPase class 1 family [H]
Homologues:
Organism=Homo sapiens, GI22907028, Length=335, Percent_Identity=41.7910447761194, Blast_Score=251, Evalue=6e-67, Organism=Homo sapiens, GI189083692, Length=334, Percent_Identity=41.6167664670659, Blast_Score=251, Evalue=6e-67, Organism=Homo sapiens, GI16579888, Length=334, Percent_Identity=41.6167664670659, Blast_Score=251, Evalue=6e-67, Organism=Escherichia coli, GI1790679, Length=330, Percent_Identity=44.5454545454545, Blast_Score=276, Evalue=1e-75, Organism=Caenorhabditis elegans, GI17508131, Length=329, Percent_Identity=44.3768996960486, Blast_Score=278, Evalue=2e-75, Organism=Saccharomyces cerevisiae, GI6323409, Length=335, Percent_Identity=39.4029850746269, Blast_Score=258, Evalue=7e-70, Organism=Drosophila melanogaster, GI45550998, Length=325, Percent_Identity=43.6923076923077, Blast_Score=260, Evalue=8e-70, Organism=Drosophila melanogaster, GI19921562, Length=325, Percent_Identity=43.6923076923077, Blast_Score=260, Evalue=9e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000146 [H]
Pfam domain/function: PF00316 FBPase [H]
EC number: =3.1.3.11 [H]
Molecular weight: Translated: 37350; Mature: 37218
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSITRRTTLSKYLIEQQRETHNLPADLRLLIEVVARACKAISYNVSKGALGDALGTAGSE CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCC NVQGEVQKKLDILSNEILLDANEWGGNLAAMASEEMETFFPIPANYPRGEYLLVFDPLDG CCHHHHHHHHHHHCCEEEEECCCCCCCEEEHHHHHHHHEECCCCCCCCCCEEEEEECCCC SSNIDVNVSIGTIFSVLRCPDGQQATEQSFLQPGTEQVAAGYAVYGPQTVFVLTTGNGVN CCCEEEEEEHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHCCEEEECCCEEEEEECCCCEE CFTLDREVGSWVLTQSNLRIPEDTREYAINASNARHWYDPVKRYVDELNAGAEGPRGENF EEEECCCCCCEEEECCCCCCCCCHHHHEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC NMRWIASMVADVHRILNRGGIFMYPADKRTPDRPGKLRLMYEANPMSFIVEQAGGAATTG CHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHCCCHHHHH LKRILDVQPTGLHQRVPVILGSKNEVERVARYHQEAQS HHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCC >Mature Secondary Structure SITRRTTLSKYLIEQQRETHNLPADLRLLIEVVARACKAISYNVSKGALGDALGTAGSE CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCC NVQGEVQKKLDILSNEILLDANEWGGNLAAMASEEMETFFPIPANYPRGEYLLVFDPLDG CCHHHHHHHHHHHCCEEEEECCCCCCCEEEHHHHHHHHEECCCCCCCCCCEEEEEECCCC SSNIDVNVSIGTIFSVLRCPDGQQATEQSFLQPGTEQVAAGYAVYGPQTVFVLTTGNGVN CCCEEEEEEHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHCCEEEECCCEEEEEECCCCEE CFTLDREVGSWVLTQSNLRIPEDTREYAINASNARHWYDPVKRYVDELNAGAEGPRGENF EEEECCCCCCEEEECCCCCCCCCHHHHEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC NMRWIASMVADVHRILNRGGIFMYPADKRTPDRPGKLRLMYEANPMSFIVEQAGGAATTG CHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHCCCHHHHH LKRILDVQPTGLHQRVPVILGSKNEVERVARYHQEAQS HHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA