| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83719723
Identifier: 83719723
GI number: 83719723
Start: 1131938
End: 1133200
Strand: Reverse
Name: 83719723
Synonym: BTH_I0994
Alternate gene names: NA
Gene position: 1133200-1131938 (Counterclockwise)
Preceding gene: 83720452
Following gene: 83718993
Centisome position: 29.75
GC content: 71.81
Gene sequence:
>1263_bases ATGACGGTCCGGCATGCAGTCAGCGCGCGGAGCCTGCGCGCCCTCGACTGGCTCAACTTTTTCGTCGCGAACGTGCAGAC GGGCTTCGGGCCGTTCATCGCGTCGTATCTCGCCTCGCACAAGTGGACGCAGGGCGAAATCGGCATGGCGCTGTCGATCG GCACGATCAGCGCGATGGTGAGCCAGGTGCCGGGCGGCGCGGCTGTCGACGCGCTGAAGAACAAGAAAGGCGCGGCCGCG TGGGCGATCGCCGCGATCATCCTGTCCGCGGTGCTGCTCGCCGCGAGCCCGACCGTCGTGCCCGTGATCGCGGCCGAGGT GTTCCATGGCTTCGCGAGCTGCATGCTCGTGCCGGCGATGGCGGCGATCTCGTTCGCGCTCGTCGGCCGCGAGAGCCTCG GCGACCGGCTCGGCCGCAACGCGCGCTGGGCGTCGCTCGGCAGCGCGGTCGCGGCGGGCCTGATGGGGCTCACGGGCGAG TACTTCTCCGCGCGCGCGGTGTTCTGGCTGACGGCGGCGCTCGCGCTGCCCGCGCTCGTCGCGCTCGCGATGATCGAGCC GACGCACCATCATCATCACGCGGCGCCGCGCGCATCCGCGCCGCGCGACGGCACCGACGAAGACGAAGAGCGCGAAACGC TGCGCGAGCTGCTGCGCGACAAGCGGATGCTGATCTTCGCCGCGTGCGTCGTGCTGTTCCACCTGTCGAACGCGGCGATG CTGAACCTCGCCGCGGGCGAAGTGACGGCGGGCATGGGCGAGAACGTGCAGCTCGTGATCGCCGCGTGCATCATCGTCCC GCAGGCGATCGTCGCGATGCTCTCGCCGTGGGTCGGCCGCTCCGCGCAGCGCTGGGGCCGCCGGCCGATCCTGCTGCTCG GCTTCGCCGCGCTGCCGCTGCGCGCACTGCTGTTCGCCGGCGTGTCGAGCCCGTACCTGCTCGTGCCCGTGCAGATGCTC GACGGCATCAGCGCCGCCGTGTTCGGCGTGATGCTGCCGCTCATCGCCGCCGACGTCGCGGGCGGCAAGGGGCGCTACAA CCTGTGCATCGGGCTCTTCGGCCTCGCGGCGGGCGTCGGCGCAACGCTCAGCACCGCGCTCGCAGGCTTCGCGGCCGACC ACTTCGGCAACGCGATGAGCTTCTTCGGGCTCGCCGCCGCAGGCGCGCTGGCGACGCTGCTCGTATGGTTCGCGATGCCC GAGACGCGCGATGCGACGCTCGCCGAAGACGCGCAGCGCCCGAGCGCCGAGCCGGCGCAGTGA
Upstream 100 bases:
>100_bases ATGCCGGCGACAAGCCGATCCTCGCCGTCTCGCCTGCGGCCCCCGCCGCGCCCGCCGCCCCCGCTGCCGCACCGGCCGCC GCTCGAGCAGGGGCGAAACG
Downstream 100 bases:
>100_bases CGCGCCGACAGCCGCTGCGGCGTTGCACGCGGTGCGATGCAGGGCGCGCCGGCGCATCCGCATGAGGATGCGTCTGCGAT GCGGTCGATGCGGTCGATGC
Product: major facilitator superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MTVRHAVSARSLRALDWLNFFVANVQTGFGPFIASYLASHKWTQGEIGMALSIGTISAMVSQVPGGAAVDALKNKKGAAA WAIAAIILSAVLLAASPTVVPVIAAEVFHGFASCMLVPAMAAISFALVGRESLGDRLGRNARWASLGSAVAAGLMGLTGE YFSARAVFWLTAALALPALVALAMIEPTHHHHHAAPRASAPRDGTDEDEERETLRELLRDKRMLIFAACVVLFHLSNAAM LNLAAGEVTAGMGENVQLVIAACIIVPQAIVAMLSPWVGRSAQRWGRRPILLLGFAALPLRALLFAGVSSPYLLVPVQML DGISAAVFGVMLPLIAADVAGGKGRYNLCIGLFGLAAGVGATLSTALAGFAADHFGNAMSFFGLAAAGALATLLVWFAMP ETRDATLAEDAQRPSAEPAQ
Sequences:
>Translated_420_residues MTVRHAVSARSLRALDWLNFFVANVQTGFGPFIASYLASHKWTQGEIGMALSIGTISAMVSQVPGGAAVDALKNKKGAAA WAIAAIILSAVLLAASPTVVPVIAAEVFHGFASCMLVPAMAAISFALVGRESLGDRLGRNARWASLGSAVAAGLMGLTGE YFSARAVFWLTAALALPALVALAMIEPTHHHHHAAPRASAPRDGTDEDEERETLRELLRDKRMLIFAACVVLFHLSNAAM LNLAAGEVTAGMGENVQLVIAACIIVPQAIVAMLSPWVGRSAQRWGRRPILLLGFAALPLRALLFAGVSSPYLLVPVQML DGISAAVFGVMLPLIAADVAGGKGRYNLCIGLFGLAAGVGATLSTALAGFAADHFGNAMSFFGLAAAGALATLLVWFAMP ETRDATLAEDAQRPSAEPAQ >Mature_419_residues TVRHAVSARSLRALDWLNFFVANVQTGFGPFIASYLASHKWTQGEIGMALSIGTISAMVSQVPGGAAVDALKNKKGAAAW AIAAIILSAVLLAASPTVVPVIAAEVFHGFASCMLVPAMAAISFALVGRESLGDRLGRNARWASLGSAVAAGLMGLTGEY FSARAVFWLTAALALPALVALAMIEPTHHHHHAAPRASAPRDGTDEDEERETLRELLRDKRMLIFAACVVLFHLSNAAML NLAAGEVTAGMGENVQLVIAACIIVPQAIVAMLSPWVGRSAQRWGRRPILLLGFAALPLRALLFAGVSSPYLLVPVQMLD GISAAVFGVMLPLIAADVAGGKGRYNLCIGLFGLAAGVGATLSTALAGFAADHFGNAMSFFGLAAAGALATLLVWFAMPE TRDATLAEDAQRPSAEPAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43700; Mature: 43568
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVRHAVSARSLRALDWLNFFVANVQTGFGPFIASYLASHKWTQGEIGMALSIGTISAMV CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHH SQVPGGAAVDALKNKKGAAAWAIAAIILSAVLLAASPTVVPVIAAEVFHGFASCMLVPAM HHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH AAISFALVGRESLGDRLGRNARWASLGSAVAAGLMGLTGEYFSARAVFWLTAALALPALV HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH ALAMIEPTHHHHHAAPRASAPRDGTDEDEERETLRELLRDKRMLIFAACVVLFHLSNAAM HHHHHCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHE LNLAAGEVTAGMGENVQLVIAACIIVPQAIVAMLSPWVGRSAQRWGRRPILLLGFAALPL EEEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHCCCCHHHHCCCCEEEHHHHHHHH RALLFAGVSSPYLLVPVQMLDGISAAVFGVMLPLIAADVAGGKGRYNLCIGLFGLAAGVG HHHHHHCCCCCEEEEEHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH ATLSTALAGFAADHFGNAMSFFGLAAAGALATLLVWFAMPETRDATLAEDAQRPSAEPAQ HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCC >Mature Secondary Structure TVRHAVSARSLRALDWLNFFVANVQTGFGPFIASYLASHKWTQGEIGMALSIGTISAMV CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHH SQVPGGAAVDALKNKKGAAAWAIAAIILSAVLLAASPTVVPVIAAEVFHGFASCMLVPAM HHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH AAISFALVGRESLGDRLGRNARWASLGSAVAAGLMGLTGEYFSARAVFWLTAALALPALV HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH ALAMIEPTHHHHHAAPRASAPRDGTDEDEERETLRELLRDKRMLIFAACVVLFHLSNAAM HHHHHCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHE LNLAAGEVTAGMGENVQLVIAACIIVPQAIVAMLSPWVGRSAQRWGRRPILLLGFAALPL EEEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHCCCCHHHHCCCCEEEHHHHHHHH RALLFAGVSSPYLLVPVQMLDGISAAVFGVMLPLIAADVAGGKGRYNLCIGLFGLAAGVG HHHHHHCCCCCEEEEEHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH ATLSTALAGFAADHFGNAMSFFGLAAAGALATLLVWFAMPETRDATLAEDAQRPSAEPAQ HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]