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The map label for this gene is tnpR [H]

Identifier: 83719709

GI number: 83719709

Start: 3682590

End: 3683165

Strand: Direct

Name: tnpR [H]

Synonym: BTH_I3231

Alternate gene names: 83719709

Gene position: 3682590-3683165 (Clockwise)

Preceding gene: 83719616

Following gene: 83718972

Centisome position: 96.68

GC content: 63.54

Gene sequence:

>576_bases
GTGTCCCGAACCTTCGCATACGCCCGCGTCAGCACGGCCGACCAGACGGCAGCTAACCAACTCCGCGAGATCGAGGCGGC
TGGCTTCAATGTCGACAAGCGCCGGGTCGTAACGGAAAGCATCTCAGGTAGCGTAAGCGCGGACCAGCGGCCGGGGTTTG
CGGACTTGCTCCGCAGACTGGAAGAAGGCGACGTGTTGATCGTGACGAAGCTCGACCGGCTCGGCCGGAACGCGATGGAC
GTGCGCGCAACAGTCGAAGCGTTGGCGGCACGCGGCATTCGGATTCATTGCCTTGCGCTCGGCGGAGTTGACCTGACAAG
CGCGGCCGGCCGGATGACGATGCAGGTATTGAACGCCGTTGCCGAGTTTGAGCGTGACTTATTGATCGAGCGAACGCAGG
CCGGTATCGCGCGAGCGAAGGCGGAAGGGAAAGCGATGGGGCGGCCGTCCGCACTGTCCCCTAAACAGCAGGACGAGGTG
AGGCAGCGATTGAGCGAAGGGGCAAGCGTCGCCAGCCTCGCGAAGCAGTACGACACAAGCCGTCAGACGATCATGCGGGT
ACGCGACGCGGCATAA

Upstream 100 bases:

>100_bases
TACGGACATGGGTGCGAAGGGGTGTTCGAAAATAAGGCTTTGATATTTTCGTACAGGGGTTACAATTCGTACACCCTTTT
TGAACACGCTGGAGCCCACG

Downstream 100 bases:

>100_bases
GGCCCGACCGTTCAAAGTCACTTTTTCACGGGCCGTAAGGCCCGTTTTCATTCCCACGCGCGGGAGGCGGCGGCGCAGGG
AGCTTCTTTGCGCGTAGCGT

Product: transposon Tn2501 resolvase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MSRTFAYARVSTADQTAANQLREIEAAGFNVDKRRVVTESISGSVSADQRPGFADLLRRLEEGDVLIVTKLDRLGRNAMD
VRATVEALAARGIRIHCLALGGVDLTSAAGRMTMQVLNAVAEFERDLLIERTQAGIARAKAEGKAMGRPSALSPKQQDEV
RQRLSEGASVASLAKQYDTSRQTIMRVRDAA

Sequences:

>Translated_191_residues
MSRTFAYARVSTADQTAANQLREIEAAGFNVDKRRVVTESISGSVSADQRPGFADLLRRLEEGDVLIVTKLDRLGRNAMD
VRATVEALAARGIRIHCLALGGVDLTSAAGRMTMQVLNAVAEFERDLLIERTQAGIARAKAEGKAMGRPSALSPKQQDEV
RQRLSEGASVASLAKQYDTSRQTIMRVRDAA
>Mature_190_residues
SRTFAYARVSTADQTAANQLREIEAAGFNVDKRRVVTESISGSVSADQRPGFADLLRRLEEGDVLIVTKLDRLGRNAMDV
RATVEALAARGIRIHCLALGGVDLTSAAGRMTMQVLNAVAEFERDLLIERTQAGIARAKAEGKAMGRPSALSPKQQDEVR
QRLSEGASVASLAKQYDTSRQTIMRVRDAA

Specific function: Resolvase catalyzes the resolution (a site-specific recombination) of the cointegrated replicon to yield the final transposition products [H]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the site-specific recombinase resolvase family [H]

Homologues:

Organism=Escherichia coli, GI1787638, Length=188, Percent_Identity=58.5106382978723, Blast_Score=236, Evalue=6e-64,
Organism=Escherichia coli, GI1787827, Length=188, Percent_Identity=57.9787234042553, Blast_Score=235, Evalue=2e-63,
Organism=Escherichia coli, GI1787404, Length=182, Percent_Identity=36.8131868131868, Blast_Score=110, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR006118
- InterPro:   IPR006119
- InterPro:   IPR006120 [H]

Pfam domain/function: PF02796 HTH_7; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 20716; Mature: 20585

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: PS00397 RECOMBINASES_1 ; PS00398 RECOMBINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRTFAYARVSTADQTAANQLREIEAAGFNVDKRRVVTESISGSVSADQRPGFADLLRRL
CCCCEEHEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
EEGDVLIVTKLDRLGRNAMDVRATVEALAARGIRIHCLALGGVDLTSAAGRMTMQVLNAV
CCCCEEEEECHHHHCCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHH
AEFERDLLIERTQAGIARAKAEGKAMGRPSALSPKQQDEVRQRLSEGASVASLAKQYDTS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCHH
RQTIMRVRDAA
HHHHHHHHCCC
>Mature Secondary Structure 
SRTFAYARVSTADQTAANQLREIEAAGFNVDKRRVVTESISGSVSADQRPGFADLLRRL
CCCEEHEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
EEGDVLIVTKLDRLGRNAMDVRATVEALAARGIRIHCLALGGVDLTSAAGRMTMQVLNAV
CCCCEEEEECHHHHCCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHH
AEFERDLLIERTQAGIARAKAEGKAMGRPSALSPKQQDEVRQRLSEGASVASLAKQYDTS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCHH
RQTIMRVRDAA
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3027041 [H]