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The map label for this gene is ybhR [C]

Identifier: 83719702

GI number: 83719702

Start: 2619427

End: 2620167

Strand: Direct

Name: ybhR [C]

Synonym: BTH_I2328

Alternate gene names: 83719702

Gene position: 2619427-2620167 (Clockwise)

Preceding gene: 83720810

Following gene: 83721062

Centisome position: 68.77

GC content: 70.72

Gene sequence:

>741_bases
ATGAACGCCGTCGCCGCGATCGTCTGGTTCGACCTGAAGCGCTTCTGGGCGTCGCCGCTGCGAATCCTGTTCGGGCTCAC
GCAGCCGCTGCTGTACCTGTTCGTGCTCGGCGCGGCGCTGCGAAGCGGCACGTACGCGGAAATCGGCGGCTATCAGGCCT
ACATCTTCCCGGGCGTGATCGGGCTGTCGCTGATGTTCACCGCGATCTCGGCCGCGATCGGCATCGTGCACGACCGGCAG
ACCGGCCTTCTGAACGCGCTGCTCGTGTCGCCCGTGCGCCGCGTCGACATCGCGCTCGGCAAGATCGGCTCGGGCGCGCT
GATCGCGTGGCTGCAGGCGCTGCTGCTGCTGCCGTTCTCGCCGACGATCGGAATCGGCGTGACCGCGCCGCGCCTCGCGC
TGCTCGTCGCGGCGATGGCGTTCGCCGCGCTCGTGTTTTCCGCGCTGGGGCTCGCGCTCGCGCTGCCGTTCCGGTCGGTG
ATCGTGTTTCCGGTCGTGTCGAACACGTTGCTGCTGCCGATGTTCTTCCTGTCGGGCGGGCTGTATCCGCTCGATCTGGC
GCCGGACTGGGTGCGCGCGGCGGCCGCGCTCGATCCTGCCGCCTACGGCGTCGACCTGATGCGCGGCGTGCTGAGCATGC
AGTTCGCGATCGCGCCGTCGCGCTCGATCGCGGCGCTTGCGGCGTGCCTCGTCGTCGCGGGCGCGCTCGTCGTGCGCGGG
GTCGGGCGGCGGGACGCGTAG

Upstream 100 bases:

>100_bases
GCGCGGATATCGCCGCGCCGGGGCTGAAGGACGTCGTCGGCCACTGGATCGCCGCGCGCCGGGGCGGCTGCGCCGCGCCG
CCGCTCGTCGGGAAGCCGGC

Downstream 100 bases:

>100_bases
CGCGCGAGGCGGGGCGCGAAGCCGGGTGAGGGCTCGCTCGCGCAGCCGCCGCAGCCGCCGGGCGCGGATTCGCGGTGCGG
CCGGCCGGTCGTGGCCGCCG

Product: transporter

Products: NA

Alternate protein names: ABC Transporter Permease Protein; ABC-Type Multidrug Transport System Permease Component; Efflux ABC Transporter Permease Protein; Daunorubicin Resistance ABC Transporter Membrane Protein; Daunorubicin Resistance ABC Transporter Permease; Multidrug ABC Transporter Permease Protein; ABC-2 Type Transporter Superfamily; ABC Multidrug Efflux Pump Inner Membrane Subunit; Daunorubicin Resistance Transmembrane Protein; ABC Transporter Permease; ABC-Type Drug Export System Membrane Protein; ABC Transporter; ABC Efflux Pump Inner Membrane Subunit; Multidrug ABC Transporter Permease; ABC-2 Transporter Component; ABC Type Transporter Permease Component; Daunorubicin Resistance ABC Transporter Permease Protein; Transporter ABC-2 Integral Membrane Protein Family; ABC-Type Multidrug Transport System Permease; ABC Transporter Protein

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MNAVAAIVWFDLKRFWASPLRILFGLTQPLLYLFVLGAALRSGTYAEIGGYQAYIFPGVIGLSLMFTAISAAIGIVHDRQ
TGLLNALLVSPVRRVDIALGKIGSGALIAWLQALLLLPFSPTIGIGVTAPRLALLVAAMAFAALVFSALGLALALPFRSV
IVFPVVSNTLLLPMFFLSGGLYPLDLAPDWVRAAAALDPAAYGVDLMRGVLSMQFAIAPSRSIAALAACLVVAGALVVRG
VGRRDA

Sequences:

>Translated_246_residues
MNAVAAIVWFDLKRFWASPLRILFGLTQPLLYLFVLGAALRSGTYAEIGGYQAYIFPGVIGLSLMFTAISAAIGIVHDRQ
TGLLNALLVSPVRRVDIALGKIGSGALIAWLQALLLLPFSPTIGIGVTAPRLALLVAAMAFAALVFSALGLALALPFRSV
IVFPVVSNTLLLPMFFLSGGLYPLDLAPDWVRAAAALDPAAYGVDLMRGVLSMQFAIAPSRSIAALAACLVVAGALVVRG
VGRRDA
>Mature_246_residues
MNAVAAIVWFDLKRFWASPLRILFGLTQPLLYLFVLGAALRSGTYAEIGGYQAYIFPGVIGLSLMFTAISAAIGIVHDRQ
TGLLNALLVSPVRRVDIALGKIGSGALIAWLQALLLLPFSPTIGIGVTAPRLALLVAAMAFAALVFSALGLALALPFRSV
IVFPVVSNTLLLPMFFLSGGLYPLDLAPDWVRAAAALDPAAYGVDLMRGVLSMQFAIAPSRSIAALAACLVVAGALVVRG
VGRRDA

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25789; Mature: 25789

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCC
>Mature Secondary Structure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CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA