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The map label for this gene is fdhD [H]

Identifier: 83719690

GI number: 83719690

Start: 648506

End: 649330

Strand: Reverse

Name: fdhD [H]

Synonym: BTH_I0569

Alternate gene names: 83719690

Gene position: 649330-648506 (Counterclockwise)

Preceding gene: 83719871

Following gene: 83720819

Centisome position: 17.05

GC content: 70.06

Gene sequence:

>825_bases
GTGAGTCTGTCCGAAACCGTCGAACCCAGCGGCATCGTCGAGCTCGCGGTGCGCAGACGGCGCGGCGACGCGCTCGAGCC
GGCCGTCGACCGCGTCGGCCAGGAATGGCCGGTCGCGCTCGTATTCAACGGCATCTCGCACGCGGTGATGATGTGCACGC
CGCGCGATCTGGAAGCGTTCGCGGTCGGCTTCGCGGTGTCCGAAGGCATCGTCGGGCGCGGCAGCGACGTGAAGGACATC
GAGGTCGCGCTGCACGGCGACGCGCCGCTGCCGTACGCCGAAGTGCAACTGACGGTCGTCCAGCAGGCGTTCGCCGCGCT
GAAGGAAAAGCGCCGCGCGCTCGCGGGGCGCACCGGCTGCGGCGTGTGCGGCATCGAAAGCATCGATCTGCTCGATCTCG
TGCCCGAACGCGTGCCCGATGCCGGCTTTCTCGCGCGCATCGCGCCGGATGCGATCGCACGCGCGGCGCGCGAGCTTCCC
GCGCACCAGGCGCTCACGCGGCAAACGGGCGGCCTGCACGCGGCCGCGTGGTGCGACGCGTCGGGCGCGATCGTCCATGC
GTTCGAAGACATCGGCCGCCACAACGCGCTCGACAAGCTGATCGGCACGCTGACGCTCACGCGCGCCGACATGACGAACG
GCTTCGTATTCTTGTCGAGCCGCGCGAGCTACGAACTCGTGCGCAAATCGGCGCGCGTCGGCATTCCGATGGTCGCGACG
ATCTCCGCGCCGTCGTCGCTCGCGATCGAGATCGCGCGGCAGGCGGGGCTGAGGCTCGTGAGTTTCTGCCGCGAGGCGGG
CTACGTCGACTACGGCACCGCGTAG

Upstream 100 bases:

>100_bases
GGCACGTTTGGCCCGTCTGGAGTATTTTAGAACCTTCGCGGGCGTCGAGCTTGCCGCCCGGCATCGCGCCCCGCTCGCCC
GTCCCATCGAAGGAGCCCCC

Downstream 100 bases:

>100_bases
CGCGCCGCGTCGCGGCACGCGCGAAGGCGACGTGCGGCATGCCGCCGCGCCGGCATCCGCGCGCGCGATGCGGCCGGCAC
GAGCCGCCGCGCCGCATCGC

Product: formate dehydrogenase family accessory protein FdhD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MSLSETVEPSGIVELAVRRRRGDALEPAVDRVGQEWPVALVFNGISHAVMMCTPRDLEAFAVGFAVSEGIVGRGSDVKDI
EVALHGDAPLPYAEVQLTVVQQAFAALKEKRRALAGRTGCGVCGIESIDLLDLVPERVPDAGFLARIAPDAIARAARELP
AHQALTRQTGGLHAAAWCDASGAIVHAFEDIGRHNALDKLIGTLTLTRADMTNGFVFLSSRASYELVRKSARVGIPMVAT
ISAPSSLAIEIARQAGLRLVSFCREAGYVDYGTA

Sequences:

>Translated_274_residues
MSLSETVEPSGIVELAVRRRRGDALEPAVDRVGQEWPVALVFNGISHAVMMCTPRDLEAFAVGFAVSEGIVGRGSDVKDI
EVALHGDAPLPYAEVQLTVVQQAFAALKEKRRALAGRTGCGVCGIESIDLLDLVPERVPDAGFLARIAPDAIARAARELP
AHQALTRQTGGLHAAAWCDASGAIVHAFEDIGRHNALDKLIGTLTLTRADMTNGFVFLSSRASYELVRKSARVGIPMVAT
ISAPSSLAIEIARQAGLRLVSFCREAGYVDYGTA
>Mature_273_residues
SLSETVEPSGIVELAVRRRRGDALEPAVDRVGQEWPVALVFNGISHAVMMCTPRDLEAFAVGFAVSEGIVGRGSDVKDIE
VALHGDAPLPYAEVQLTVVQQAFAALKEKRRALAGRTGCGVCGIESIDLLDLVPERVPDAGFLARIAPDAIARAARELPA
HQALTRQTGGLHAAAWCDASGAIVHAFEDIGRHNALDKLIGTLTLTRADMTNGFVFLSSRASYELVRKSARVGIPMVATI
SAPSSLAIEIARQAGLRLVSFCREAGYVDYGTA

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=245, Percent_Identity=44.0816326530612, Blast_Score=199, Evalue=2e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 29100; Mature: 28968

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSETVEPSGIVELAVRRRRGDALEPAVDRVGQEWPVALVFNGISHAVMMCTPRDLEAF
CCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEECCCCCEEEEECCCCHHHH
AVGFAVSEGIVGRGSDVKDIEVALHGDAPLPYAEVQLTVVQQAFAALKEKRRALAGRTGC
HHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GVCGIESIDLLDLVPERVPDAGFLARIAPDAIARAARELPAHQALTRQTGGLHAAAWCDA
CCCCCCCCHHHHHHHHHCCCCCHHHHHCHHHHHHHHHHCCHHHHHHHHCCCCEEEEEECC
SGAIVHAFEDIGRHNALDKLIGTLTLTRADMTNGFVFLSSRASYELVRKSARVGIPMVAT
CCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEECCCHHHHHHHHHHCCCCEEEE
ISAPSSLAIEIARQAGLRLVSFCREAGYVDYGTA
ECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SLSETVEPSGIVELAVRRRRGDALEPAVDRVGQEWPVALVFNGISHAVMMCTPRDLEAF
CCCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEECCCCCEEEEECCCCHHHH
AVGFAVSEGIVGRGSDVKDIEVALHGDAPLPYAEVQLTVVQQAFAALKEKRRALAGRTGC
HHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GVCGIESIDLLDLVPERVPDAGFLARIAPDAIARAARELPAHQALTRQTGGLHAAAWCDA
CCCCCCCCHHHHHHHHHCCCCCHHHHHCHHHHHHHHHHCCHHHHHHHHCCCCEEEEEECC
SGAIVHAFEDIGRHNALDKLIGTLTLTRADMTNGFVFLSSRASYELVRKSARVGIPMVAT
CCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEECCCHHHHHHHHHHCCCCEEEE
ISAPSSLAIEIARQAGLRLVSFCREAGYVDYGTA
ECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA