| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83719687
Identifier: 83719687
GI number: 83719687
Start: 508858
End: 509427
Strand: Direct
Name: 83719687
Synonym: BTH_I0457
Alternate gene names: NA
Gene position: 508858-509427 (Clockwise)
Preceding gene: 83721414
Following gene: 83719396
Centisome position: 13.36
GC content: 61.75
Gene sequence:
>570_bases ATGAACGATAAGAACGGCGGTCGGGTGGGGCGGGCCATTGCGAAGACCGCGCTGGCCCTGGCGCTAGTCGGCGCTTCCGG CAGTGCGTTTGCGGATCGTTGGGGCCTGCAGCTCGGCGGCGGCGTGGCCGATCACGACATGAAGAAGGGCGACATCGCCG TTGCCTGGGACCCGGGCTGGACCTGGTGGGAAATCGGCGGCTGGCATTTTGCGTTCGTCGCCGAAGGACACCTGTCGTAC TGGCGCTATACGGGCGACCGCGCGATCAACGACAGCATCTGGGAAGTCGGCGCGACGCCGATCATCCGGTTCATCAAGAG CGCGGGCTACGTGCGGCCGTTCATCGAGGTGGGCGCCGGCGTGCGCTTCCTGTCGCATCCGACGATATCGGAGAATTACT CGATGTCGACGTCGTTCCAGTTCGCCGACATGGTCGGCGTCGGCGCGCAATTCGGCAATCGTCAGCAGTATCAAGCGGGT TTGCGTTTCCAGCATGTATCGAACGCGGGTATCAAAGACCCGAATCCTGGTATAAATTTCAGCCAGCTCTACGTGCAATA CAACTTCTGA
Upstream 100 bases:
>100_bases TGCCGATCGGAAAAGTCCTTTACCATAAGATGCTGTTCGCTCGAGCTCGGCGTGTCGATTGCGCCGAGGCTCTATTCAAC CAGAGAAGTTGGAGTACGAG
Downstream 100 bases:
>100_bases TCGGCGCGCCGGACGCGCGCATGCAGTCGAGGAGCATGGCAATGGTGGCGAAGGGGATCGATGCGATTCGCGCGCTCGAG CGCGACCGGTTTCGGGCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Lipid A 3-O-Deacylase-Related Protein; Lipid A 3-O-Deacylase PagL Family Protein; Lipid A Deacylase Signal Peptide Protein; Lipid A 3-O-Deacylase Superfamily; Lipoprotein
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MNDKNGGRVGRAIAKTALALALVGASGSAFADRWGLQLGGGVADHDMKKGDIAVAWDPGWTWWEIGGWHFAFVAEGHLSY WRYTGDRAINDSIWEVGATPIIRFIKSAGYVRPFIEVGAGVRFLSHPTISENYSMSTSFQFADMVGVGAQFGNRQQYQAG LRFQHVSNAGIKDPNPGINFSQLYVQYNF
Sequences:
>Translated_189_residues MNDKNGGRVGRAIAKTALALALVGASGSAFADRWGLQLGGGVADHDMKKGDIAVAWDPGWTWWEIGGWHFAFVAEGHLSY WRYTGDRAINDSIWEVGATPIIRFIKSAGYVRPFIEVGAGVRFLSHPTISENYSMSTSFQFADMVGVGAQFGNRQQYQAG LRFQHVSNAGIKDPNPGINFSQLYVQYNF >Mature_189_residues MNDKNGGRVGRAIAKTALALALVGASGSAFADRWGLQLGGGVADHDMKKGDIAVAWDPGWTWWEIGGWHFAFVAEGHLSY WRYTGDRAINDSIWEVGATPIIRFIKSAGYVRPFIEVGAGVRFLSHPTISENYSMSTSFQFADMVGVGAQFGNRQQYQAG LRFQHVSNAGIKDPNPGINFSQLYVQYNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20752; Mature: 20752
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDKNGGRVGRAIAKTALALALVGASGSAFADRWGLQLGGGVADHDMKKGDIAVAWDPGW CCCCCCCHHHHHHHHHHHHHHEECCCCCCHHHHCCCEECCCCCCCCCCCCCEEEEECCCC TWWEIGGWHFAFVAEGHLSYWRYTGDRAINDSIWEVGATPIIRFIKSAGYVRPFIEVGAG CEEEECCEEEEEEECCCCEEEEEECCCCCCCHHHHCCCHHHHHHHHHCCCCCHHHHHCCC VRFLSHPTISENYSMSTSFQFADMVGVGAQFGNRQQYQAGLRFQHVSNAGIKDPNPGINF EEEECCCCCCCCCCCCCCEEHHHHHHCCCCCCCCHHHHHCCEEEECCCCCCCCCCCCCCE SQLYVQYNF EEEEEEECC >Mature Secondary Structure MNDKNGGRVGRAIAKTALALALVGASGSAFADRWGLQLGGGVADHDMKKGDIAVAWDPGW CCCCCCCHHHHHHHHHHHHHHEECCCCCCHHHHCCCEECCCCCCCCCCCCCEEEEECCCC TWWEIGGWHFAFVAEGHLSYWRYTGDRAINDSIWEVGATPIIRFIKSAGYVRPFIEVGAG CEEEECCEEEEEEECCCCEEEEEECCCCCCCHHHHCCCHHHHHHHHHCCCCCHHHHHCCC VRFLSHPTISENYSMSTSFQFADMVGVGAQFGNRQQYQAGLRFQHVSNAGIKDPNPGINF EEEECCCCCCCCCCCCCCEEHHHHHHCCCCCCCCHHHHHCCEEEECCCCCCCCCCCCCCE SQLYVQYNF EEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA