| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is yhcW [H]
Identifier: 83719663
GI number: 83719663
Start: 803250
End: 803948
Strand: Direct
Name: yhcW [H]
Synonym: BTH_I0698
Alternate gene names: 83719663
Gene position: 803250-803948 (Clockwise)
Preceding gene: 83720775
Following gene: 83718962
Centisome position: 21.09
GC content: 74.54
Gene sequence:
>699_bases ATGACGGCGCATGCGCACGACGCGCGCGCGCTCGTCTGCGATTGCGACGGCGTGCTGATCGACAGCGAGGCGATCGCGGC CGACGTGCTGGTGCGCGAGCTCGAGGCGCGCTGGCCGGGCGTCGCGGTGCGGCCGATCGTGATGCCGCTTCTCGGCCTGC GCACCGAGCGCGTGCTCGGCTGTGCGAGCGAGCGTACGGGCCGCGCGCTCGCCGATTCGGATGTCGAAGCGATTCGGCGC AGCGTCGAGGCGGCGGCGGTTCAGGCGCCGGTCGTCGACGGCATCGACGCGGCGCTCGCGCGGATCGATCTGACGATCGC GTGCGCGAGCAACAGCCGCCGGCATTACGTCGACGCCGCGCTGCGCCGCACGGGCCTCAAGCGTTTTTTCGGCGAGCGCC TGTTCTGCGCGGACGGCGTCGCGCGCCCGAAGCCCGCCCCCGACGTCTATCTGGCCGCCGCGCATGCGCTCGGCGTCGCG CCGTCGCGATGCCTCGTCGTCGAGGACAGCGCGACCGGCGTGACGGCCGCGTCGGCGGCGGGCATGACGGTGCTCGGCTT CGTCGGCGGCGGCCACGCGTCGCCGCGGCAGGTCGACGCGCTGCGCGGAATCGGCGCGCGGCGCGTGTTCGACGACATGC GGGAGCTGCCCGGCCTCGTCGCGCGATGGGTCGAGACGGGGGCGCTCGATCCGCACTGA
Upstream 100 bases:
>100_bases AGCTGTCGGCGGCGTCGCTGCTCGCGGTCGCGCCGATTCTCGTCGTCGGCTGGCTGTCGCAGAAGCAGCTCGTGCGCGGC CTCACGTTTGGGGCGGTCAA
Downstream 100 bases:
>100_bases ACGATCGCGCCGCGCGCGCCCGATGCGCCGCGCGGCCGCACAACTGAACGGAGACAAATCATGGCAAGCGTGCTCCTGCG CAATATCGGCAAGCGCTACG
Product: HAD-superfamily hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MTAHAHDARALVCDCDGVLIDSEAIAADVLVRELEARWPGVAVRPIVMPLLGLRTERVLGCASERTGRALADSDVEAIRR SVEAAAVQAPVVDGIDAALARIDLTIACASNSRRHYVDAALRRTGLKRFFGERLFCADGVARPKPAPDVYLAAAHALGVA PSRCLVVEDSATGVTAASAAGMTVLGFVGGGHASPRQVDALRGIGARRVFDDMRELPGLVARWVETGALDPH
Sequences:
>Translated_232_residues MTAHAHDARALVCDCDGVLIDSEAIAADVLVRELEARWPGVAVRPIVMPLLGLRTERVLGCASERTGRALADSDVEAIRR SVEAAAVQAPVVDGIDAALARIDLTIACASNSRRHYVDAALRRTGLKRFFGERLFCADGVARPKPAPDVYLAAAHALGVA PSRCLVVEDSATGVTAASAAGMTVLGFVGGGHASPRQVDALRGIGARRVFDDMRELPGLVARWVETGALDPH >Mature_231_residues TAHAHDARALVCDCDGVLIDSEAIAADVLVRELEARWPGVAVRPIVMPLLGLRTERVLGCASERTGRALADSDVEAIRRS VEAAAVQAPVVDGIDAALARIDLTIACASNSRRHYVDAALRRTGLKRFFGERLFCADGVARPKPAPDVYLAAAHALGVAP SRCLVVEDSATGVTAASAAGMTVLGFVGGGHASPRQVDALRGIGARRVFDDMRELPGLVARWVETGALDPH
Specific function: Unknown
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Escherichia coli, GI1790151, Length=191, Percent_Identity=26.1780104712042, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1789046, Length=177, Percent_Identity=30.5084745762712, Blast_Score=68, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 24390; Mature: 24259
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAHAHDARALVCDCDGVLIDSEAIAADVLVRELEARWPGVAVRPIVMPLLGLRTERVLG CCCCCCCCEEEEEECCCEEECCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCHHHHHH CASERTGRALADSDVEAIRRSVEAAAVQAPVVDGIDAALARIDLTIACASNSRRHYVDAA CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEEEEECCCCCHHHHHHH LRRTGLKRFFGERLFCADGVARPKPAPDVYLAAAHALGVAPSRCLVVEDSATGVTAASAA HHHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHC GMTVLGFVGGGHASPRQVDALRGIGARRVFDDMRELPGLVARWVETGALDPH CCEEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TAHAHDARALVCDCDGVLIDSEAIAADVLVRELEARWPGVAVRPIVMPLLGLRTERVLG CCCCCCCEEEEEECCCEEECCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCHHHHHH CASERTGRALADSDVEAIRRSVEAAAVQAPVVDGIDAALARIDLTIACASNSRRHYVDAA CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEEEEECCCCCHHHHHHH LRRTGLKRFFGERLFCADGVARPKPAPDVYLAAAHALGVAPSRCLVVEDSATGVTAASAA HHHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHC GMTVLGFVGGGHASPRQVDALRGIGARRVFDDMRELPGLVARWVETGALDPH CCEEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969498; 9384377 [H]