| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83719653
Identifier: 83719653
GI number: 83719653
Start: 2260837
End: 2261271
Strand: Direct
Name: 83719653
Synonym: BTH_I1997
Alternate gene names: NA
Gene position: 2260837-2261271 (Clockwise)
Preceding gene: 83719671
Following gene: 83720890
Centisome position: 59.35
GC content: 67.82
Gene sequence:
>435_bases ATGTTCAAGCACATCCTGGTTCCGACCGACGGGTCCGATCTGTCGAGGAAGGCGATCGACGGCGCGATCGATCTCGCGCA GGCGGTCGGTGCGCGCGTCACGGCCTACGCGTGCCTGCCGCAATATCCGTACTCGCCGTTTTCCGAGGTCGTGATCGAGC CGCCCGCCGATTTTCGCGAGCGCAGCGAGCGCGAGGCGCGCGCGCATCTGGACGAGGTCGAGGCGGCCGCGCGGCGCGCG GGCGTTGCGTGCGAGTCGGCGACGAGCGTGCATCCGTCGCCGTATCTCGGCATCATCGAGGCGGCGGAGCGGGGCGGCTG CGATGTGATCTTCATGGCGTCGCACGGCAGGCGCGGGCTCGGCAGCCTGTTGATCGGCAGCGAGACGCAACGCGTGCTGA CCCATACGAAGATTCCCGTGATCGTCTATCGATAG
Upstream 100 bases:
>100_bases CAATCGAATCACCCAGCGTCCGCGCGGGCCGCCCGGCGTCGGCTGCCCGCCGCGGGTACGCCCGCGTCCGGACGCGCCGC AGTTGCCGACGGAGGCCGCC
Downstream 100 bases:
>100_bases CGTGCCGCACGCAGCCGGGCGATTGGCCGCGATGCGCCGTGCAAAAAAATAGGCGCGCCGGGCAGGGCCGGCGCGCTCGA ATGTCAGCGACGTCGCAAGA
Product: universal stress protein
Products: NA
Alternate protein names: UspA Domain Protein; UspA Domain-Containing Protein; Universal Stress Family Protein; Universal Stress Protein UspA; Universal Stress Family; Universal Stress Protein F; Universal Stress Protein UspA Family; Uspa Domain Protein
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MFKHILVPTDGSDLSRKAIDGAIDLAQAVGARVTAYACLPQYPYSPFSEVVIEPPADFRERSEREARAHLDEVEAAARRA GVACESATSVHPSPYLGIIEAAERGGCDVIFMASHGRRGLGSLLIGSETQRVLTHTKIPVIVYR
Sequences:
>Translated_144_residues MFKHILVPTDGSDLSRKAIDGAIDLAQAVGARVTAYACLPQYPYSPFSEVVIEPPADFRERSEREARAHLDEVEAAARRA GVACESATSVHPSPYLGIIEAAERGGCDVIFMASHGRRGLGSLLIGSETQRVLTHTKIPVIVYR >Mature_144_residues MFKHILVPTDGSDLSRKAIDGAIDLAQAVGARVTAYACLPQYPYSPFSEVVIEPPADFRERSEREARAHLDEVEAAARRA GVACESATSVHPSPYLGIIEAAERGGCDVIFMASHGRRGLGSLLIGSETQRVLTHTKIPVIVYR
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15575; Mature: 15575
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKHILVPTDGSDLSRKAIDGAIDLAQAVGARVTAYACLPQYPYSPFSEVVIEPPADFRE CCCEEEEECCCCHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCCCHHEEECCCCCHHH RSEREARAHLDEVEAAARRAGVACESATSVHPSPYLGIIEAAERGGCDVIFMASHGRRGL HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEECCCCCCCCEEEEECCCCCCC GSLLIGSETQRVLTHTKIPVIVYR CCEEECCCHHHHHHHCCCCEEEEC >Mature Secondary Structure MFKHILVPTDGSDLSRKAIDGAIDLAQAVGARVTAYACLPQYPYSPFSEVVIEPPADFRE CCCEEEEECCCCHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCCCHHEEECCCCCHHH RSEREARAHLDEVEAAARRAGVACESATSVHPSPYLGIIEAAERGGCDVIFMASHGRRGL HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEECCCCCCCCEEEEECCCCCCC GSLLIGSETQRVLTHTKIPVIVYR CCEEECCCHHHHHHHCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA