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The map label for this gene is degP [H]

Identifier: 83719609

GI number: 83719609

Start: 3029475

End: 3030983

Strand: Reverse

Name: degP [H]

Synonym: BTH_I2658

Alternate gene names: 83719609

Gene position: 3030983-3029475 (Counterclockwise)

Preceding gene: 83721640

Following gene: 83718677

Centisome position: 79.57

GC content: 72.9

Gene sequence:

>1509_bases
GTGTCTCGTCAAACGTTTGGCCGCGCCCTGATTCATGCCGCAGTGCTCGGGGCGGCGCTCGCCGGCTTTGCGTGCCTGCG
GCCGGCGGAGGTCGCAGCGGGCACGCTGTCTCCGTCCGCGAAGGCGAAGCGGATCGCGCAGCCCGGCCCCGCAGGGCCGA
TCGATTTCCCCACGCTCGTCGAGCGATACGGACCCGCGGTGGTCAGCGTGAGCGTGCCCGCCCAGGACCCGCAGATGTCG
GCGTCCGGTCTCGAGGCGCTCGATCCCGACGATCCGTTCTTCGCGTACTTCAAGTCCGCCGCGATGCCGCCGCCCGCGTC
GCAGGACAACGTACCGCGCGCGATGGCGGGCGCCGGGTCCGGTTTCATCGTCAGCGCCGACGGGCTCATCCTGACGACCG
CCTACGTGGTCGGGCAGGCGAGCGAAGCGACGGTCCGGCTGATCGACCGGCGCGAATTCAAGGCGCGGGTGCTCGCGGTC
GACGACCAGAGCGACGTGGCCGTGCTGCAGATCGACGCGACGAAGTTGCCGACCGTGCGGCTCGGCGATTCGTCGCGCGT
GCGCGTCGGCGAGCCCGTGCTGACGATCGGCACGCCCGACGGCTCGGCGAACACTGTGACGACGGGCATCGTCAGCGCGA
CGTCGCGCACGCTGCCCGACGGCAGCCGTTTCCCGTTCTTCCAGACCGACGTGACCGGCAACCTCGACAACTCGGGCGGT
CCGGTGTTCAACCGCGCGGGCGAGGTGATCGGCATCGACGTGCAGATCTACGGAAGCGGCGATCGCAATCCGGACGTGAC
GTTCGCGATCCCGATCGGCATGGCGGCCAAGGTGCGCGCGCAGGTGCTGCAGGCGCAGCCGCCTGCTCAGCCGGCGCAGC
GCGCGGCTGCGCAAAACGGGCTTGGCGTCGACGTGCAGGACGTGGGCCCCGGGCTCGCGGCCGCGTTCGGCTTGCCGCGG
CCGGCGGGCGCGCTCGTCAACGCGGTCGAGCCGGGGTCGCCCGCGGCCGCGGTCGGCCTGAAGCCGGGCGACGTGATCGT
GCAGGTGGGCGACCGGCCGCTCGGCCGCTCGTCCGAGCTCGCCGCCGACGTGGCGGCGCTGCCGCCTGCGGCGAGCGTGC
CGATCACGCTGGTCCGCAACCGGATGCCGATGACGGTGATGCTCGGCGCGGGCGCGGCGGCGGGCGCATCGCCGGCGGCG
GCCTCGGCGAACGCGGGCGCGGGCAGCAGCGAGGCGGGCGGCGCGGACCGCTTCGGCCTGACGATGCATCCGCTGACGGA
CGACGAGCGCCGCTCGACGGGGCTGCCCGTCGGGATGATGGTCGATGCGGTGCGCGGGCCGGCGGAGAATGCCGGCATCC
GGCCGGGCGACGTCGTGCTGGAGTTCGACGACACGCTGATCGAGACGCCGGACATGGTGCCCGCGTTGGAGGCGAAGGCC
GGCAAGGCGGTCGCGGTGCTGATTCAGCGGGGAAACGAGCGGAAGTTCGTGTCGGTGCGCTCGAGGTAG

Upstream 100 bases:

>100_bases
GCAGTCGGCCGCTATGCAATAATCGATTCATCAGTGCGTGCTAGTCCTTCGCGCGTCGCGCGACGGGCCCCTGGCATAAC
GACTGCCTTGGAGGTGCACT

Downstream 100 bases:

>100_bases
GGACGATTCGACGCGCTTGGCCGATGCCGGGATTTCGCGCCGTCCGCCGTGCTTGCCCCACGGGCGGTTGGCATCGGCGC
GCGCGGTGCCGGCGATGCCC

Product: protease signal peptide protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 502; Mature: 501

Protein sequence:

>502_residues
MSRQTFGRALIHAAVLGAALAGFACLRPAEVAAGTLSPSAKAKRIAQPGPAGPIDFPTLVERYGPAVVSVSVPAQDPQMS
ASGLEALDPDDPFFAYFKSAAMPPPASQDNVPRAMAGAGSGFIVSADGLILTTAYVVGQASEATVRLIDRREFKARVLAV
DDQSDVAVLQIDATKLPTVRLGDSSRVRVGEPVLTIGTPDGSANTVTTGIVSATSRTLPDGSRFPFFQTDVTGNLDNSGG
PVFNRAGEVIGIDVQIYGSGDRNPDVTFAIPIGMAAKVRAQVLQAQPPAQPAQRAAAQNGLGVDVQDVGPGLAAAFGLPR
PAGALVNAVEPGSPAAAVGLKPGDVIVQVGDRPLGRSSELAADVAALPPAASVPITLVRNRMPMTVMLGAGAAAGASPAA
ASANAGAGSSEAGGADRFGLTMHPLTDDERRSTGLPVGMMVDAVRGPAENAGIRPGDVVLEFDDTLIETPDMVPALEAKA
GKAVAVLIQRGNERKFVSVRSR

Sequences:

>Translated_502_residues
MSRQTFGRALIHAAVLGAALAGFACLRPAEVAAGTLSPSAKAKRIAQPGPAGPIDFPTLVERYGPAVVSVSVPAQDPQMS
ASGLEALDPDDPFFAYFKSAAMPPPASQDNVPRAMAGAGSGFIVSADGLILTTAYVVGQASEATVRLIDRREFKARVLAV
DDQSDVAVLQIDATKLPTVRLGDSSRVRVGEPVLTIGTPDGSANTVTTGIVSATSRTLPDGSRFPFFQTDVTGNLDNSGG
PVFNRAGEVIGIDVQIYGSGDRNPDVTFAIPIGMAAKVRAQVLQAQPPAQPAQRAAAQNGLGVDVQDVGPGLAAAFGLPR
PAGALVNAVEPGSPAAAVGLKPGDVIVQVGDRPLGRSSELAADVAALPPAASVPITLVRNRMPMTVMLGAGAAAGASPAA
ASANAGAGSSEAGGADRFGLTMHPLTDDERRSTGLPVGMMVDAVRGPAENAGIRPGDVVLEFDDTLIETPDMVPALEAKA
GKAVAVLIQRGNERKFVSVRSR
>Mature_501_residues
SRQTFGRALIHAAVLGAALAGFACLRPAEVAAGTLSPSAKAKRIAQPGPAGPIDFPTLVERYGPAVVSVSVPAQDPQMSA
SGLEALDPDDPFFAYFKSAAMPPPASQDNVPRAMAGAGSGFIVSADGLILTTAYVVGQASEATVRLIDRREFKARVLAVD
DQSDVAVLQIDATKLPTVRLGDSSRVRVGEPVLTIGTPDGSANTVTTGIVSATSRTLPDGSRFPFFQTDVTGNLDNSGGP
VFNRAGEVIGIDVQIYGSGDRNPDVTFAIPIGMAAKVRAQVLQAQPPAQPAQRAAAQNGLGVDVQDVGPGLAAAFGLPRP
AGALVNAVEPGSPAAAVGLKPGDVIVQVGDRPLGRSSELAADVAALPPAASVPITLVRNRMPMTVMLGAGAAAGASPAAA
SANAGAGSSEAGGADRFGLTMHPLTDDERRSTGLPVGMMVDAVRGPAENAGIRPGDVVLEFDDTLIETPDMVPALEAKAG
KAVAVLIQRGNERKFVSVRSR

Specific function: Protease With A Shared Specificity With Degp. [C]

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PDZ (DHR) domains [H]

Homologues:

Organism=Homo sapiens, GI4506141, Length=286, Percent_Identity=34.965034965035, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI22129776, Length=278, Percent_Identity=35.6115107913669, Blast_Score=128, Evalue=1e-29,
Organism=Homo sapiens, GI7019477, Length=282, Percent_Identity=33.3333333333333, Blast_Score=122, Evalue=7e-28,
Organism=Homo sapiens, GI24308541, Length=255, Percent_Identity=32.5490196078431, Blast_Score=113, Evalue=4e-25,
Organism=Escherichia coli, GI1789629, Length=455, Percent_Identity=31.4285714285714, Blast_Score=169, Evalue=5e-43,
Organism=Escherichia coli, GI1786356, Length=456, Percent_Identity=28.9473684210526, Blast_Score=146, Evalue=3e-36,
Organism=Escherichia coli, GI1789630, Length=273, Percent_Identity=31.8681318681319, Blast_Score=127, Evalue=2e-30,
Organism=Drosophila melanogaster, GI24646839, Length=318, Percent_Identity=31.7610062893082, Blast_Score=125, Evalue=5e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR009003
- InterPro:   IPR011782
- InterPro:   IPR001254
- InterPro:   IPR001940 [H]

Pfam domain/function: PF00595 PDZ; PF00089 Trypsin [H]

EC number: 3.4.21.- [C]

Molecular weight: Translated: 51046; Mature: 50915

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRQTFGRALIHAAVLGAALAGFACLRPAEVAAGTLSPSAKAKRIAQPGPAGPIDFPTLV
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHCCCCCCCCCCHHHHH
ERYGPAVVSVSVPAQDPQMSASGLEALDPDDPFFAYFKSAAMPPPASQDNVPRAMAGAGS
HHHCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCC
GFIVSADGLILTTAYVVGQASEATVRLIDRREFKARVLAVDDQSDVAVLQIDATKLPTVR
CEEEECCCEEEEEEEHHCCCCCCEEEEEHHHCCEEEEEEECCCCCEEEEEECCCCCCEEE
LGDSSRVRVGEPVLTIGTPDGSANTVTTGIVSATSRTLPDGSRFPFFQTDVTGNLDNSGG
ECCCCCEEECCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCC
PVFNRAGEVIGIDVQIYGSGDRNPDVTFAIPIGMAAKVRAQVLQAQPPAQPAQRAAAQNG
CCCCCCCCEEEEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHCC
LGVDVQDVGPGLAAAFGLPRPAGALVNAVEPGSPAAAVGLKPGDVIVQVGDRPLGRSSEL
CCEEHHHCCCCHHHHHCCCCCCHHHEECCCCCCCCEEECCCCCCEEEEECCCCCCCCHHH
AADVAALPPAASVPITLVRNRMPMTVMLGAGAAAGASPAAASANAGAGSSEAGGADRFGL
HHHHHHCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
TMHPLTDDERRSTGLPVGMMVDAVRGPAENAGIRPGDVVLEFDDTLIETPDMVPALEAKA
EECCCCCCHHHHCCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCEECCCCCCCHHHCCC
GKAVAVLIQRGNERKFVSVRSR
CCEEEEEEECCCCCEEEEECCC
>Mature Secondary Structure 
SRQTFGRALIHAAVLGAALAGFACLRPAEVAAGTLSPSAKAKRIAQPGPAGPIDFPTLV
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHCCCCCCCCCCHHHHH
ERYGPAVVSVSVPAQDPQMSASGLEALDPDDPFFAYFKSAAMPPPASQDNVPRAMAGAGS
HHHCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCC
GFIVSADGLILTTAYVVGQASEATVRLIDRREFKARVLAVDDQSDVAVLQIDATKLPTVR
CEEEECCCEEEEEEEHHCCCCCCEEEEEHHHCCEEEEEEECCCCCEEEEEECCCCCCEEE
LGDSSRVRVGEPVLTIGTPDGSANTVTTGIVSATSRTLPDGSRFPFFQTDVTGNLDNSGG
ECCCCCEEECCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCC
PVFNRAGEVIGIDVQIYGSGDRNPDVTFAIPIGMAAKVRAQVLQAQPPAQPAQRAAAQNG
CCCCCCCCEEEEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHCC
LGVDVQDVGPGLAAAFGLPRPAGALVNAVEPGSPAAAVGLKPGDVIVQVGDRPLGRSSEL
CCEEHHHCCCCHHHHHCCCCCCHHHEECCCCCCCCEEECCCCCCEEEEECCCCCCCCHHH
AADVAALPPAASVPITLVRNRMPMTVMLGAGAAAGASPAAASANAGAGSSEAGGADRFGL
HHHHHHCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
TMHPLTDDERRSTGLPVGMMVDAVRGPAENAGIRPGDVVLEFDDTLIETPDMVPALEAKA
EECCCCCCHHHHCCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCEECCCCCCCHHHCCC
GKAVAVLIQRGNERKFVSVRSR
CCEEEEEEECCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7861951 [H]