| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is yfjG [C]
Identifier: 83719607
GI number: 83719607
Start: 2324222
End: 2324659
Strand: Direct
Name: yfjG [C]
Synonym: BTH_I2050
Alternate gene names: 83719607
Gene position: 2324222-2324659 (Clockwise)
Preceding gene: 83721006
Following gene: 83719599
Centisome position: 61.02
GC content: 60.5
Gene sequence:
>438_bases ATGGCAGATGTCCAGAAAACCGTATTGATCCGCCATTCGGCGGAACAGATGTTCGACCTCGTCACCGACGTGGCCGATTA CCCGAACTTCCTGCCCTGGTGCGGCGGCGTCGAGATTCGCCGCCGCGACGAAACCGGGATGGAGGCGCGGATCGACATCA ATTTCAAGGGCATCAAGCAGCATTTCGCGACCCGCAATACGCAGCAGCGTCCAACCCGGATCGACATGGAGTTCGCGGAC GGGCCGTTTCGCAAGTTCACCGGCTACTGGCGCTTCACGCCGCTGCGCGCGGATGCGTGCAAGATCGAATTCGCGCTGCA CTACGAGTTCTCGAGCATCATCCTCGAGAAGATCATCGGCCCCGTGTTCACGCATATCGCGAATACGTTCGTCGAGTCGT TCGTGAAGCGCGCCGACCAGCGCTACGGCAAGGGGTGA
Upstream 100 bases:
>100_bases CATGAAGGGAAATGGCCAACTCGTTTAAAATCACGATTTTAGCAAAGCGGGGCAGTGTTGGCCCGGCTTGCACGTTTACC TTTGCGACGCCGCGCGATTT
Downstream 100 bases:
>100_bases CGCACATGCCGAAGGTTCAGGTCTGCTATGCGCTGCCCGAGCGGCAGACGCTCGTCGCCGTCGACGTGCCGGCCGGCGCG ACCGTGCGCGACGCGATCGA
Product: cyclase/dehydrase superfamily
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MADVQKTVLIRHSAEQMFDLVTDVADYPNFLPWCGGVEIRRRDETGMEARIDINFKGIKQHFATRNTQQRPTRIDMEFAD GPFRKFTGYWRFTPLRADACKIEFALHYEFSSIILEKIIGPVFTHIANTFVESFVKRADQRYGKG
Sequences:
>Translated_145_residues MADVQKTVLIRHSAEQMFDLVTDVADYPNFLPWCGGVEIRRRDETGMEARIDINFKGIKQHFATRNTQQRPTRIDMEFAD GPFRKFTGYWRFTPLRADACKIEFALHYEFSSIILEKIIGPVFTHIANTFVESFVKRADQRYGKG >Mature_144_residues ADVQKTVLIRHSAEQMFDLVTDVADYPNFLPWCGGVEIRRRDETGMEARIDINFKGIKQHFATRNTQQRPTRIDMEFADG PFRKFTGYWRFTPLRADACKIEFALHYEFSSIILEKIIGPVFTHIANTFVESFVKRADQRYGKG
Specific function: Unknown
COG id: COG2867
COG function: function code I; Oligoketide cyclase/lipid transport protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0083 family [H]
Homologues:
Organism=Homo sapiens, GI13376737, Length=139, Percent_Identity=25.1798561151079, Blast_Score=72, Evalue=2e-13, Organism=Homo sapiens, GI151101386, Length=139, Percent_Identity=21.5827338129496, Blast_Score=67, Evalue=6e-12, Organism=Homo sapiens, GI151101384, Length=139, Percent_Identity=21.5827338129496, Blast_Score=67, Evalue=7e-12, Organism=Escherichia coli, GI1788972, Length=143, Percent_Identity=41.958041958042, Blast_Score=129, Evalue=8e-32, Organism=Caenorhabditis elegans, GI115532702, Length=140, Percent_Identity=29.2857142857143, Blast_Score=75, Evalue=9e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005031 [H]
Pfam domain/function: PF03364 Polyketide_cyc [H]
EC number: NA
Molecular weight: Translated: 16898; Mature: 16766
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADVQKTVLIRHSAEQMFDLVTDVADYPNFLPWCGGVEIRRRDETGMEARIDINFKGIKQ CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCEEEEEECHHHHHH HFATRNTQQRPTRIDMEFADGPFRKFTGYWRFTPLRADACKIEFALHYEFSSIILEKIIG HHHCCCCCCCCCEEEEEECCCCHHHHCCEEEECCCCCCCEEEEEEEEHHHHHHHHHHHHH PVFTHIANTFVESFVKRADQRYGKG HHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ADVQKTVLIRHSAEQMFDLVTDVADYPNFLPWCGGVEIRRRDETGMEARIDINFKGIKQ CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCEEEEEECHHHHHH HFATRNTQQRPTRIDMEFADGPFRKFTGYWRFTPLRADACKIEFALHYEFSSIILEKIIG HHHCCCCCCCCCEEEEEECCCCHHHHCCEEEECCCCCCCEEEEEEEEHHHHHHHHHHHHH PVFTHIANTFVESFVKRADQRYGKG HHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA