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The map label for this gene is dinF [H]

Identifier: 83719590

GI number: 83719590

Start: 3166891

End: 3168282

Strand: Direct

Name: dinF [H]

Synonym: BTH_I2755

Alternate gene names: 83719590

Gene position: 3166891-3168282 (Clockwise)

Preceding gene: 83721299

Following gene: 83721656

Centisome position: 83.14

GC content: 69.04

Gene sequence:

>1392_bases
ATGTCCGCCTCCTCCACTTCCGCGCACGCGGGCGAAGACCCCGAGCCGCGACCTGCCGGGAACCGGCATCGGCGCGTCCT
CGGCCTCGCGCTGCCGATCATCGCCGCGAACCTCACGCAACCGATTCTCGGCGCAGTCGACACGGCCGTCGCCGGCCACC
TGAACGGCCCGCAATATCTCGGCGGTGTCGCGCTCGGCGGCCTCTTCTTCAGTTTCGTGTACTGGGGCTTCGGCTTCCTG
CGGATGGGAACGACCGGGCTCGTCGCGCAGGCATTCGGCGCGAATGACCTCGCGGGAATCCGCATCAACGTGCTGCGCGC
GCTCCTGCTGGCGTTCGCGCTCGGCGCGGCGGTGCTCGCGCTGCAGACACCGCTCGTCGGCATCGCGTTCGCCGCGCTCG
GCGGTAGCGATGCAGTGCGCGCAACCGCGCTCGAATACGCTCACGCACGAATCTGGGCCGCGCCGTTCGCGCTCGCGAAC
TATGTCGTGCTCGGCTATCTGCTCGGCATGCAGCGCGTGCGTCTAGCGCTCGTGATCCAGGTGTTCGTCAACGTCGTCAA
CATCGGCGCCGTGCTGCTCTACGTGTACCGCTTCGACTGGGGTGTCGCCGGCATCGGCGCCGCGACCGCGACCGCCGACA
TCACGGGCTTCGCGCTCAGCTTGCTGCTGCTGCGCTGGCTGAACCCGCGCGGCCTCGCGAAGATCGGTCGCGCCGAACTC
TTCGATCGCGCGGCGCTCGCGCGTCTCGTCGCCCTCAATCGCGATATCTTCATCCGCACGCTGTGCCTGCTGTCGGCGTT
CGGCTGGTTCGCGCATCTCGGTGCGCGGCAAGGCGACGCAACGCTCGCAGCCAACGCGCTGCTCCTCAATTTCCAGACTT
TCATGGCATATGCGCTCGACGGCTTCGCGCATGCTGCCGAGGCGCTCGTCGGCGCCGCGGCCGGCGCGCGAAATCGCGAT
GCATTCCGGCAAGCGCTGCGCACGACGTTCTTGTGGGCGGGAATCGGCGCGCTCGCGTTCGCGCTCGCCTATTGGGGCGC
CGGCAGTTGGATCGTCGCGCAGCTCACCGATCAATCGTCCGTGCGCGGCGTAGCAGAACGCTATCTTCCGTGGGCCGCGC
TCTCGCCGGTCATTTCCGTCTGGGGCTTCATGCTCGACGGCGTGTTCATCGGCGCGACGCACACGCGCGCACTGATGCGA
GCGATGGCGACATCGTTCGCGCTGTTCGTCGCCGCAACGCTCGCGCTGGTCGGCCCGTTCGGCAATCACGGGCTCTGGAT
CGCATTGCTCGTGTTCATGGCCGCACGCGGCGCGACGCTTGCACGCCGGCTGCCGGCGCTCGAGCAAGCCATCGCGCAAG
ACGCGGCGGCGCCGGCGCGCGCCGCCGGCTGA

Upstream 100 bases:

>100_bases
CAGGCCAGCACCGCGCAGGATTATGCAACGCGCGATCCGGAGCTCTGGGCAGTCGTCGTGTCGCCGTGGGTGTGCGTGCA
GGAACGCGCATAACGCCGCG

Downstream 100 bases:

>100_bases
CGCGCACATCGCGCCGGCCACGGTAAAGACGACGCCCATCCGCGTCGCGCATCGGCGGCCGCCGGTCGTCGATCGCCGTC
AGCCCGGCATGCAAGCGCCG

Product: DNA-damage-inducible protein F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 462

Protein sequence:

>463_residues
MSASSTSAHAGEDPEPRPAGNRHRRVLGLALPIIAANLTQPILGAVDTAVAGHLNGPQYLGGVALGGLFFSFVYWGFGFL
RMGTTGLVAQAFGANDLAGIRINVLRALLLAFALGAAVLALQTPLVGIAFAALGGSDAVRATALEYAHARIWAAPFALAN
YVVLGYLLGMQRVRLALVIQVFVNVVNIGAVLLYVYRFDWGVAGIGAATATADITGFALSLLLLRWLNPRGLAKIGRAEL
FDRAALARLVALNRDIFIRTLCLLSAFGWFAHLGARQGDATLAANALLLNFQTFMAYALDGFAHAAEALVGAAAGARNRD
AFRQALRTTFLWAGIGALAFALAYWGAGSWIVAQLTDQSSVRGVAERYLPWAALSPVISVWGFMLDGVFIGATHTRALMR
AMATSFALFVAATLALVGPFGNHGLWIALLVFMAARGATLARRLPALEQAIAQDAAAPARAAG

Sequences:

>Translated_463_residues
MSASSTSAHAGEDPEPRPAGNRHRRVLGLALPIIAANLTQPILGAVDTAVAGHLNGPQYLGGVALGGLFFSFVYWGFGFL
RMGTTGLVAQAFGANDLAGIRINVLRALLLAFALGAAVLALQTPLVGIAFAALGGSDAVRATALEYAHARIWAAPFALAN
YVVLGYLLGMQRVRLALVIQVFVNVVNIGAVLLYVYRFDWGVAGIGAATATADITGFALSLLLLRWLNPRGLAKIGRAEL
FDRAALARLVALNRDIFIRTLCLLSAFGWFAHLGARQGDATLAANALLLNFQTFMAYALDGFAHAAEALVGAAAGARNRD
AFRQALRTTFLWAGIGALAFALAYWGAGSWIVAQLTDQSSVRGVAERYLPWAALSPVISVWGFMLDGVFIGATHTRALMR
AMATSFALFVAATLALVGPFGNHGLWIALLVFMAARGATLARRLPALEQAIAQDAAAPARAAG
>Mature_462_residues
SASSTSAHAGEDPEPRPAGNRHRRVLGLALPIIAANLTQPILGAVDTAVAGHLNGPQYLGGVALGGLFFSFVYWGFGFLR
MGTTGLVAQAFGANDLAGIRINVLRALLLAFALGAAVLALQTPLVGIAFAALGGSDAVRATALEYAHARIWAAPFALANY
VVLGYLLGMQRVRLALVIQVFVNVVNIGAVLLYVYRFDWGVAGIGAATATADITGFALSLLLLRWLNPRGLAKIGRAELF
DRAALARLVALNRDIFIRTLCLLSAFGWFAHLGARQGDATLAANALLLNFQTFMAYALDGFAHAAEALVGAAAGARNRDA
FRQALRTTFLWAGIGALAFALAYWGAGSWIVAQLTDQSSVRGVAERYLPWAALSPVISVWGFMLDGVFIGATHTRALMRA
MATSFALFVAATLALVGPFGNHGLWIALLVFMAARGATLARRLPALEQAIAQDAAAPARAAG

Specific function: Unknown

COG id: COG0534

COG function: function code V; Na+-driven multidrug efflux pump

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family [H]

Homologues:

Organism=Escherichia coli, GI1790477, Length=417, Percent_Identity=43.1654676258993, Blast_Score=244, Evalue=7e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002528 [H]

Pfam domain/function: PF01554 MatE [H]

EC number: NA

Molecular weight: Translated: 48623; Mature: 48492

Theoretical pI: Translated: 10.91; Mature: 10.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASSTSAHAGEDPEPRPAGNRHRRVLGLALPIIAANLTQPILGAVDTAVAGHLNGPQYL
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
GGVALGGLFFSFVYWGFGFLRMGTTGLVAQAFGANDLAGIRINVLRALLLAFALGAAVLA
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LQTPLVGIAFAALGGSDAVRATALEYAHARIWAAPFALANYVVLGYLLGMQRVRLALVIQ
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFVNVVNIGAVLLYVYRFDWGVAGIGAATATADITGFALSLLLLRWLNPRGLAKIGRAEL
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
FDRAALARLVALNRDIFIRTLCLLSAFGWFAHLGARQGDATLAANALLLNFQTFMAYALD
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
GFAHAAEALVGAAAGARNRDAFRQALRTTFLWAGIGALAFALAYWGAGSWIVAQLTDQSS
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHH
VRGVAERYLPWAALSPVISVWGFMLDGVFIGATHTRALMRAMATSFALFVAATLALVGPF
HHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GNHGLWIALLVFMAARGATLARRLPALEQAIAQDAAAPARAAG
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SASSTSAHAGEDPEPRPAGNRHRRVLGLALPIIAANLTQPILGAVDTAVAGHLNGPQYL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
GGVALGGLFFSFVYWGFGFLRMGTTGLVAQAFGANDLAGIRINVLRALLLAFALGAAVLA
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LQTPLVGIAFAALGGSDAVRATALEYAHARIWAAPFALANYVVLGYLLGMQRVRLALVIQ
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFVNVVNIGAVLLYVYRFDWGVAGIGAATATADITGFALSLLLLRWLNPRGLAKIGRAEL
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
FDRAALARLVALNRDIFIRTLCLLSAFGWFAHLGARQGDATLAANALLLNFQTFMAYALD
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
GFAHAAEALVGAAAGARNRDAFRQALRTTFLWAGIGALAFALAYWGAGSWIVAQLTDQSS
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHH
VRGVAERYLPWAALSPVISVWGFMLDGVFIGATHTRALMRAMATSFALFVAATLALVGPF
HHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GNHGLWIALLVFMAARGATLARRLPALEQAIAQDAAAPARAAG
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]