| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is pncB2 [H]
Identifier: 83719586
GI number: 83719586
Start: 716912
End: 718273
Strand: Direct
Name: pncB2 [H]
Synonym: BTH_I0625
Alternate gene names: 83719586
Gene position: 716912-718273 (Clockwise)
Preceding gene: 83719604
Following gene: 83718680
Centisome position: 18.82
GC content: 69.9
Gene sequence:
>1362_bases ATGACGAAGCCCGTGCGCGACGGCGCGCTGCTCGCCGACCTGTACGAATTCACGATGCTGCAGTCGTATTTCGATTGCGG GATGAACGACACGGCGACGTTCGAGCTCTTCGTGCGCAAGCTGCCCGCGCATCGAAACTTCCTGATGGCGGCGGGGCTCG AGCAGGCGCTCGATTATCTGGCGGCGCTTGCGCTCGAGCCCGACGAGATCGAGGCGCTCGCGAGCACGGGGCTCTTCAGC GACGGCTTTCTCGCATCGCTCGAATCGCTGCGCTTCACGGGCTCGGTGCGCGCGATGCGCGAAGGCACGGTGTTCTTCGC CGACGAGCCGATCCTGCAAGTCACCGCGCCGATGCGCGAGGCGCAACTGATCGAGAGCCGCGTGATGAACCTGCTGCATT ACGAATCGATCGTCGCGAGCAAGGCCGCGCGCGCGGTGCTCGCGGCGCCCGGCAGGACGCTCGTCGATTTCGGGCTGCGC CGCGCGCACGGCGCCGAGGCCGCGCTGCTGTCGGCGCGAGCGAGCTACGTCGCGGGCTTCGCGGGCACGGCGACGCTGCT CGCCGGCTTGCGCTACGGGATTCCGACGTACGGCACGATGGCGCATTCGTATGTGCAGGCGCACGACGACGAATCGCTCG CGTTCGAGCATTTCGCACGCTCGTTCCCGCGCAACGCGATGCTGCTCGTCGACACATACGACACCGAGGCCGCCGTGGGC AAGGTCATCGACGTGGCGAGGAAGCTCGCGCGCGAAGGCGTCGAAGTGAAGGGCGTGCGGCTCGACAGCGGCGATCTCGC GCAGCACGCGATGCGCGTGCGCGCGATGTTCGATCGCGCGGGGCTCGACCGGGTGACGATCTTCGCGAGCGGCAATCTCG ACGAGTACAGGCTCGCCGAGTTGATCGGCAAGGGCGCACCGATCGACGGCTTCGGCGTGGGCACGCGAATGAACACGTCG GCGGACGCGCCGTATGCGGACTGCGCGTACAAGCTGACCGAATACGCGGGCGTGCCGCGCCGCAAGCGCTCGGAGGGCAA GGCAACGTGGCCCGGGCGCAAGCAGGTGTACCGCCGCTATCGCGACGACGGCCTGCTCGACGGCGATTGTCTCGCGCTGC ATGACGATGTGCGCCCGGGCGTCGCGCTGCTCGCGCCGGTGATGATCGCCGGCGAGCGCGTCGCGCCCTCGCCGAGCCTT GCCGACGTCCGCGCGCACGCGCGCGCGCAGCTCGACGCGCTGCCCGCGGCGTTGCGCGATCTCGCGCGCGCGGCCGAGTA TCCGGTCGCCGTGACCGGCACGTTGACGGCGCTCGCGCAACGGCTCGACTCGCCGGCGGCGGGCGATGCGTCGCGCGCGT AG
Upstream 100 bases:
>100_bases TCGAGGAGCCGGGCACGCTCGACGAAGTCGCGCGCGTCGCGGCCGACTGGTTCGTCGCGCATCTCGGCGACGGCCGGCGG CCGCCCGAAGGGACGCGAAG
Downstream 100 bases:
>100_bases CGCGGCGCGCGCGGGCCGCGCTACGCGCATTGGCGCGAATCGTCGCCGGTCGCCGCATGCATCGGTATGCAGTCGAACGG GCCGCAGGGGCGAGACCGTT
Product: nicotinate phosphoribosyltransferase
Products: NA
Alternate protein names: NAPRTase pncB2 [H]
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MTKPVRDGALLADLYEFTMLQSYFDCGMNDTATFELFVRKLPAHRNFLMAAGLEQALDYLAALALEPDEIEALASTGLFS DGFLASLESLRFTGSVRAMREGTVFFADEPILQVTAPMREAQLIESRVMNLLHYESIVASKAARAVLAAPGRTLVDFGLR RAHGAEAALLSARASYVAGFAGTATLLAGLRYGIPTYGTMAHSYVQAHDDESLAFEHFARSFPRNAMLLVDTYDTEAAVG KVIDVARKLAREGVEVKGVRLDSGDLAQHAMRVRAMFDRAGLDRVTIFASGNLDEYRLAELIGKGAPIDGFGVGTRMNTS ADAPYADCAYKLTEYAGVPRRKRSEGKATWPGRKQVYRRYRDDGLLDGDCLALHDDVRPGVALLAPVMIAGERVAPSPSL ADVRAHARAQLDALPAALRDLARAAEYPVAVTGTLTALAQRLDSPAAGDASRA
Sequences:
>Translated_453_residues MTKPVRDGALLADLYEFTMLQSYFDCGMNDTATFELFVRKLPAHRNFLMAAGLEQALDYLAALALEPDEIEALASTGLFS DGFLASLESLRFTGSVRAMREGTVFFADEPILQVTAPMREAQLIESRVMNLLHYESIVASKAARAVLAAPGRTLVDFGLR RAHGAEAALLSARASYVAGFAGTATLLAGLRYGIPTYGTMAHSYVQAHDDESLAFEHFARSFPRNAMLLVDTYDTEAAVG KVIDVARKLAREGVEVKGVRLDSGDLAQHAMRVRAMFDRAGLDRVTIFASGNLDEYRLAELIGKGAPIDGFGVGTRMNTS ADAPYADCAYKLTEYAGVPRRKRSEGKATWPGRKQVYRRYRDDGLLDGDCLALHDDVRPGVALLAPVMIAGERVAPSPSL ADVRAHARAQLDALPAALRDLARAAEYPVAVTGTLTALAQRLDSPAAGDASRA >Mature_452_residues TKPVRDGALLADLYEFTMLQSYFDCGMNDTATFELFVRKLPAHRNFLMAAGLEQALDYLAALALEPDEIEALASTGLFSD GFLASLESLRFTGSVRAMREGTVFFADEPILQVTAPMREAQLIESRVMNLLHYESIVASKAARAVLAAPGRTLVDFGLRR AHGAEAALLSARASYVAGFAGTATLLAGLRYGIPTYGTMAHSYVQAHDDESLAFEHFARSFPRNAMLLVDTYDTEAAVGK VIDVARKLAREGVEVKGVRLDSGDLAQHAMRVRAMFDRAGLDRVTIFASGNLDEYRLAELIGKGAPIDGFGVGTRMNTSA DAPYADCAYKLTEYAGVPRRKRSEGKATWPGRKQVYRRYRDDGLLDGDCLALHDDVRPGVALLAPVMIAGERVAPSPSLA DVRAHARAQLDALPAALRDLARAAEYPVAVTGTLTALAQRLDSPAAGDASRA
Specific function: Catalyzes the conversion of nicotinic acid (NA) to NA mononucleotide (NaMN) [H]
COG id: COG1488
COG function: function code H; Nicotinic acid phosphoribosyltransferase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAPRTase family [H]
Homologues:
Organism=Homo sapiens, GI194394158, Length=518, Percent_Identity=33.011583011583, Blast_Score=210, Evalue=3e-54, Organism=Caenorhabditis elegans, GI71997952, Length=524, Percent_Identity=27.4809160305344, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI71997947, Length=524, Percent_Identity=27.4809160305344, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI71997955, Length=203, Percent_Identity=35.9605911330049, Blast_Score=129, Evalue=2e-30, Organism=Drosophila melanogaster, GI24581587, Length=519, Percent_Identity=30.4431599229287, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI161076680, Length=205, Percent_Identity=38.0487804878049, Blast_Score=122, Evalue=7e-28, Organism=Drosophila melanogaster, GI24581595, Length=205, Percent_Identity=38.0487804878049, Blast_Score=122, Evalue=7e-28, Organism=Drosophila melanogaster, GI28574709, Length=205, Percent_Identity=38.0487804878049, Blast_Score=122, Evalue=7e-28, Organism=Drosophila melanogaster, GI24581593, Length=205, Percent_Identity=38.0487804878049, Blast_Score=122, Evalue=7e-28, Organism=Drosophila melanogaster, GI24581591, Length=205, Percent_Identity=38.0487804878049, Blast_Score=122, Evalue=7e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015977 - InterPro: IPR007229 - InterPro: IPR006405 - InterPro: IPR002638 [H]
Pfam domain/function: PF04095 NAPRTase [H]
EC number: =2.4.2.11 [H]
Molecular weight: Translated: 48878; Mature: 48747
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKPVRDGALLADLYEFTMLQSYFDCGMNDTATFELFVRKLPAHRNFLMAAGLEQALDYL CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHH AALALEPDEIEALASTGLFSDGFLASLESLRFTGSVRAMREGTVFFADEPILQVTAPMRE HHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHCCEEEEECCCCEEECCCHHH AQLIESRVMNLLHYESIVASKAARAVLAAPGRTLVDFGLRRAHGAEAALLSARASYVAGF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH AGTATLLAGLRYGIPTYGTMAHSYVQAHDDESLAFEHFARSFPRNAMLLVDTYDTEAAVG HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHH KVIDVARKLAREGVEVKGVRLDSGDLAQHAMRVRAMFDRAGLDRVTIFASGNLDEYRLAE HHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHH LIGKGAPIDGFGVGTRMNTSADAPYADCAYKLTEYAGVPRRKRSEGKATWPGRKQVYRRY HHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH RDDGLLDGDCLALHDDVRPGVALLAPVMIAGERVAPSPSLADVRAHARAQLDALPAALRD HCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LARAAEYPVAVTGTLTALAQRLDSPAAGDASRA HHHHHCCCEEEHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TKPVRDGALLADLYEFTMLQSYFDCGMNDTATFELFVRKLPAHRNFLMAAGLEQALDYL CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHH AALALEPDEIEALASTGLFSDGFLASLESLRFTGSVRAMREGTVFFADEPILQVTAPMRE HHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHCCEEEEECCCCEEECCCHHH AQLIESRVMNLLHYESIVASKAARAVLAAPGRTLVDFGLRRAHGAEAALLSARASYVAGF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH AGTATLLAGLRYGIPTYGTMAHSYVQAHDDESLAFEHFARSFPRNAMLLVDTYDTEAAVG HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHH KVIDVARKLAREGVEVKGVRLDSGDLAQHAMRVRAMFDRAGLDRVTIFASGNLDEYRLAE HHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHH LIGKGAPIDGFGVGTRMNTSADAPYADCAYKLTEYAGVPRRKRSEGKATWPGRKQVYRRY HHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH RDDGLLDGDCLALHDDVRPGVALLAPVMIAGERVAPSPSLADVRAHARAQLDALPAALRD HCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LARAAEYPVAVTGTLTALAQRLDSPAAGDASRA HHHHHCCCEEEHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]