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The map label for this gene is kdsB [H]

Identifier: 83719573

GI number: 83719573

Start: 849989

End: 850780

Strand: Reverse

Name: kdsB [H]

Synonym: BTH_I0740

Alternate gene names: 83719573

Gene position: 850780-849989 (Counterclockwise)

Preceding gene: 83718675

Following gene: 83719561

Centisome position: 22.33

GC content: 70.83

Gene sequence:

>792_bases
ATGACCTCCCCGCTCCCTTTCGTCGCCGTCGTCCCCGCCCGCCTCGCATCGACCCGCCTGCCGAACAAGCCGCTCGCCGA
TCTCGGCGGCAAGCCGATGGTCGTGCGCGTCGCCGAGCGCGCGCGTGAGGCGGGCGCGCAGCAGGTGCTCGTCGCGTCCG
ACGCGCAGAGCGTGCTCGACGCGGTGCGCGAGCACGGCTTCGACGCGGTGCTCACGCGCGCCGACCATCCGTCCGGCACC
GACCGCCTCGCCGAGGTCGCCGCGAAGCTCGGCTTCAGCGACGACACGATCGTCGTCAACGTTCAGGGCGACGAGCCGCT
GATCGATCCGCAGCTCGTGTGCGACGTAGCGTCGCACCTCGCCGCGCATCCGTCGTGCGCGATCGCGACGGCCGCGCACC
CGATTCACGAAGCGCACGAGGTGTTCAATCCGAACTACGTGAAGGTCGTGCTCGACGCGAACGGCGTCGCGCTGTACTTC
TCGCGCGCGCCGATTCCGTGGTCGCGCGACGCGTACCTGCCGCACTGGCCGAACATCGCGGCGATGCCCGCGCCGACGTG
CCCCGTCTATCGGCACATCGGCCTCTACGCGTATCGCGCGCGGTTCCTGCGCACGTACCCGACGCTCGCGCAGGCGCCGA
TCGAGGCGGCCGAGCAGCTCGAGCAGTTGCGCGCGATGTGGCATGGCGAGCGGATCGCCGTGCTCGTCACCGAGCACGCG
CCCGAGGCCGGCATCGACACGCCGGCCGATCTCGAACGCGTGCAGGCCCTTTTTCGGTCTCGGGCCAAATAA

Upstream 100 bases:

>100_bases
GGCGCGCGCGCCGAACCGCCGCCGCCCTGACGCGCCAACGCCGCTGCCCGCACGCCAAGCGGGCGCATTTTTCGAACCCT
TTGCGCTTCGCGCCCGTCCG

Downstream 100 bases:

>100_bases
CCCATGGCATAATCGGGCGATTGTGCGAGCGATCCGCCCGCGCCGCTCACCGAGATTCACCCCAAGCCCGACATTCGCCG
GCCGCCGCGCGTCGCATTCG

Product: 3-deoxy-manno-octulosonate cytidylyltransferase

Products: NA

Alternate protein names: CMP-2-keto-3-deoxyoctulosonic acid synthase; CKS; CMP-KDO synthase [H]

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MTSPLPFVAVVPARLASTRLPNKPLADLGGKPMVVRVAERAREAGAQQVLVASDAQSVLDAVREHGFDAVLTRADHPSGT
DRLAEVAAKLGFSDDTIVVNVQGDEPLIDPQLVCDVASHLAAHPSCAIATAAHPIHEAHEVFNPNYVKVVLDANGVALYF
SRAPIPWSRDAYLPHWPNIAAMPAPTCPVYRHIGLYAYRARFLRTYPTLAQAPIEAAEQLEQLRAMWHGERIAVLVTEHA
PEAGIDTPADLERVQALFRSRAK

Sequences:

>Translated_263_residues
MTSPLPFVAVVPARLASTRLPNKPLADLGGKPMVVRVAERAREAGAQQVLVASDAQSVLDAVREHGFDAVLTRADHPSGT
DRLAEVAAKLGFSDDTIVVNVQGDEPLIDPQLVCDVASHLAAHPSCAIATAAHPIHEAHEVFNPNYVKVVLDANGVALYF
SRAPIPWSRDAYLPHWPNIAAMPAPTCPVYRHIGLYAYRARFLRTYPTLAQAPIEAAEQLEQLRAMWHGERIAVLVTEHA
PEAGIDTPADLERVQALFRSRAK
>Mature_262_residues
TSPLPFVAVVPARLASTRLPNKPLADLGGKPMVVRVAERAREAGAQQVLVASDAQSVLDAVREHGFDAVLTRADHPSGTD
RLAEVAAKLGFSDDTIVVNVQGDEPLIDPQLVCDVASHLAAHPSCAIATAAHPIHEAHEVFNPNYVKVVLDANGVALYFS
RAPIPWSRDAYLPHWPNIAAMPAPTCPVYRHIGLYAYRARFLRTYPTLAQAPIEAAEQLEQLRAMWHGERIAVLVTEHAP
EAGIDTPADLERVQALFRSRAK

Specific function: Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria [H]

COG id: COG1212

COG function: function code M; CMP-2-keto-3-deoxyoctulosonic acid synthetase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the kdsB family [H]

Homologues:

Organism=Escherichia coli, GI1787147, Length=255, Percent_Identity=52.9411764705882, Blast_Score=268, Evalue=4e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003329
- InterPro:   IPR004528 [H]

Pfam domain/function: PF02348 CTP_transf_3 [H]

EC number: =2.7.7.38 [H]

Molecular weight: Translated: 28556; Mature: 28425

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPLPFVAVVPARLASTRLPNKPLADLGGKPMVVRVAERAREAGAQQVLVASDAQSVLD
CCCCCCHHHHHHHHHHHCCCCCCCHHHCCCCCEEHHHHHHHHHCCHHEEEEHHHHHHHHH
AVREHGFDAVLTRADHPSGTDRLAEVAAKLGFSDDTIVVNVQGDEPLIDPQLVCDVASHL
HHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHH
AAHPSCAIATAAHPIHEAHEVFNPNYVKVVLDANGVALYFSRAPIPWSRDAYLPHWPNIA
HCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCC
AMPAPTCPVYRHIGLYAYRARFLRTYPTLAQAPIEAAEQLEQLRAMWHGERIAVLVTEHA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCC
PEAGIDTPADLERVQALFRSRAK
CCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TSPLPFVAVVPARLASTRLPNKPLADLGGKPMVVRVAERAREAGAQQVLVASDAQSVLD
CCCCCHHHHHHHHHHHCCCCCCCHHHCCCCCEEHHHHHHHHHCCHHEEEEHHHHHHHHH
AVREHGFDAVLTRADHPSGTDRLAEVAAKLGFSDDTIVVNVQGDEPLIDPQLVCDVASHL
HHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHH
AAHPSCAIATAAHPIHEAHEVFNPNYVKVVLDANGVALYFSRAPIPWSRDAYLPHWPNIA
HCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCC
AMPAPTCPVYRHIGLYAYRARFLRTYPTLAQAPIEAAEQLEQLRAMWHGERIAVLVTEHA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCC
PEAGIDTPADLERVQALFRSRAK
CCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA