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The map label for this gene is cyt [H]

Identifier: 83719532

GI number: 83719532

Start: 940338

End: 940661

Strand: Reverse

Name: cyt [H]

Synonym: BTH_I0826

Alternate gene names: 83719532

Gene position: 940661-940338 (Counterclockwise)

Preceding gene: 83719513

Following gene: 83721258

Centisome position: 24.69

GC content: 64.51

Gene sequence:

>324_bases
ATGAACAGAACGACTTTGCGCCTGATGGCAATCGCGCTCGTTGCCGCGGCCGCAAACGCGCGCGCGCAACAGGCCGACGG
CCTCGCGCTTGCGCAACGAAAGAACTGCATGGCCTGCCATGCGATCGACAAGACGTTGATGGGGCCGTCATTCCACGCGA
TCGCCGACAAATACGCGGCGCGCGGCGATGCCGCCGCCTATCTCGCGCAGACGATCGTCAAAGGCAGCGTCGGCGTGTGG
GGCAACGTGCCGATGCCCGCGAACACGCAATTGACGAGCGCCGAAGCCGGCACGCTCGCGCACTGGATTCTGTCGCGCAA
ATAA

Upstream 100 bases:

>100_bases
AAGCGACAAGACGAAGAAGGGGGCGCGACGTACTCGCGCCCCCTTTCCTTTATATAATGCGCGCACCGCCAAGCCGGACG
CTGCGCCGGCGGAGACCAGC

Downstream 100 bases:

>100_bases
GCCGCTCGCATCGAAACGCGCCGCCGGCCGCACAGGGCATCCCGTTGCGCGCGCAACGCGGCGACGCCGGCACGCTTCGC
ATCTCACACTACGCGTGACG

Product: cytochrome c subfamily protein

Products: NA

Alternate protein names: Cytochrome c-551; Cytochrome c552 [H]

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MNRTTLRLMAIALVAAAANARAQQADGLALAQRKNCMACHAIDKTLMGPSFHAIADKYAARGDAAAYLAQTIVKGSVGVW
GNVPMPANTQLTSAEAGTLAHWILSRK

Sequences:

>Translated_107_residues
MNRTTLRLMAIALVAAAANARAQQADGLALAQRKNCMACHAIDKTLMGPSFHAIADKYAARGDAAAYLAQTIVKGSVGVW
GNVPMPANTQLTSAEAGTLAHWILSRK
>Mature_107_residues
MNRTTLRLMAIALVAAAANARAQQADGLALAQRKNCMACHAIDKTLMGPSFHAIADKYAARGDAAAYLAQTIVKGSVGVW
GNVPMPANTQLTSAEAGTLAHWILSRK

Specific function: Monoheme c-type cytochrome. Probable electron donor to membrane cytochrome oxidase and to periplasmic nitrite reductase [H]

COG id: COG4654

COG function: function code C; Cytochrome c551/c552

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR002324 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 11233; Mature: 11233

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRTTLRLMAIALVAAAANARAQQADGLALAQRKNCMACHAIDKTLMGPSFHAIADKYAA
CCCHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHC
RGDAAAYLAQTIVKGSVGVWGNVPMPANTQLTSAEAGTLAHWILSRK
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MNRTTLRLMAIALVAAAANARAQQADGLALAQRKNCMACHAIDKTLMGPSFHAIADKYAA
CCCHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHC
RGDAAAYLAQTIVKGSVGVWGNVPMPANTQLTSAEAGTLAHWILSRK
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9746537; 12700255 [H]