| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83719522
Identifier: 83719522
GI number: 83719522
Start: 2776541
End: 2777632
Strand: Reverse
Name: 83719522
Synonym: BTH_I2425
Alternate gene names: NA
Gene position: 2777632-2776541 (Counterclockwise)
Preceding gene: 83719617
Following gene: 83721166
Centisome position: 72.92
GC content: 70.6
Gene sequence:
>1092_bases ATGGGGCGAACGCGTCGTGATCCGGCGCGCGCTCCGTTCGCATCGTTCGTATCGCCAGAGCAAAAGGATTTCCGGATGAC TCAGCTTTCGATGCCGGCCGCGGCAGCCCGCCCGACGCTCGACGATCTGCGCGTCGAGCCCGGCCTGCCGACCGTCGTGT CGCCGCGCGAGGGCGCGGATATCGCGCTGCACGAGGCCGCGCCGCTATTGCGCGAGATCGCGAACGACGTCGTCGAGCGC GCGGGCGGCGTGCTCTTCACGGGCTTTCGCGTCGCGTCGATCGAGACGTTCCAGCGCTTCGCGGCCGATTTCGGCGATCC GCTGATCGGCTACGAGTTCGCGTCGACGCCGCGCAGCCAGGTCGAGGGCGCCGTCTACACGTCGACCGAATACCCGCCGC ACCGCTCGATTCCGCTGCACAACGAGCAGTCGTACACGCGCGAGTGGCCGATGCGGATCTGGTTCCACTGCGCGCTCGCC GCGCGCACGGGCGGCGCGACGCCGATTGCCGACAGCCGCGCGGTCTATCGCGCGCTCGATCCGGCGCTCGCCGCGCGCTT CGCCGAACGCGAGCTGCTGTACGTGCGCAATTTCGGGCAGGGGCTCGATCTGCCGTGGCAGCAGGCGTTCGGCGCCGACG ATCCGCGCGAAGTCGAGCGCATCTGCGCGGCGCGCGGGATCGACTGCGAATGGCGCGAAGGCGACGACGGCGAGCCGCTC CTGCGCACCCGCGAGCGCTGCCAGGCGGTCGCGCGCCATCCGCGCACGGGCGAGCTCGTGTGGTTCAACCAGGCGAACCT CTTTCATCTGTCGACGCTCGACGAGGACATGCAGGAGGCGCTCGTCGACGCGGTCGGCATCGAGAACGTGCCGCGCAACG TCTATTACGGCGACGGCGCGCCGCTCGAGCCGGACGCGCTCGCCGAGATCCGCGCGGTGCTCGACGGCCAGCGGATCGTG TTCCCGTGGCGCACGGGCGACGTGCTGATGCTCGACAACATGCTGAGCGCGCACGCGCGCGATCCGTTCGAGGGGCCGCG CAAGGTGGTGGTCGCGATGGCGCGCAGCCACCGCGAAACGGGCGGTGCTTAG
Upstream 100 bases:
>100_bases TGGCGCGAAGTCGGCGTGCGCGGCCCGAAGGCCGATTGCCTCGCGCACATCGAGGCCGTGTGGACCGACATGCGTCCCGC GAGCCTGCGCCGTCATCTGG
Downstream 100 bases:
>100_bases CGGATTGGGCGGATGACGACACGATGAACAACAAAGCGGTGCCGGCGCTCGCGGCGCGCGCGTTGAGCGTGGGCTACCGG GATCACCGGGTGCTCGACGG
Product: syringomycin biosynthesis enzyme
Products: NA
Alternate protein names: SyrP Protein; SyrP-Like Protein; Non-Ribosomal Peptide Synthetase; Regulatory Protein; Regulatory Protein B; Amino Acid Adenylation Domain Protein; Taurine Catabolism Dioxygenase TauD/TfdA Family; Amino Acid Adenylation Domain-Containing Protein; Pyoverdine Biosynthesis Regulatory Gene; Condensation Domain-Containing Protein; Taurine Catabolism Dioxygenase TauD TfdA Family; Taurine Catabolism Dioxygenase Taud/Tfda; SyrP-Like Regulatory Protein; NRPS-Like Protein; Peptide Synthase; Syringomycin Biosynthesis; Oxidoreductase; Clavaminic Acid Synthetase-Like Protein; Pyoverdine Biosynthesis Regulatory Gene SyrP-Like; Non Ribosomal Peptide Synthase Antibiotic Synthesis; Multi-Domain Non-Ribosomal Peptide Synthetase; Syrp Like Protein Albicidin Biosynthesis Regulation; Regulatory Protein SyrP-Like; Syringomycin Biosynthesis ; Pyoverdine Biosynthesis Regulatory Protein SyrP-Like; Syringomycin Synthesis Regulator SyrP
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MGRTRRDPARAPFASFVSPEQKDFRMTQLSMPAAAARPTLDDLRVEPGLPTVVSPREGADIALHEAAPLLREIANDVVER AGGVLFTGFRVASIETFQRFAADFGDPLIGYEFASTPRSQVEGAVYTSTEYPPHRSIPLHNEQSYTREWPMRIWFHCALA ARTGGATPIADSRAVYRALDPALAARFAERELLYVRNFGQGLDLPWQQAFGADDPREVERICAARGIDCEWREGDDGEPL LRTRERCQAVARHPRTGELVWFNQANLFHLSTLDEDMQEALVDAVGIENVPRNVYYGDGAPLEPDALAEIRAVLDGQRIV FPWRTGDVLMLDNMLSAHARDPFEGPRKVVVAMARSHRETGGA
Sequences:
>Translated_363_residues MGRTRRDPARAPFASFVSPEQKDFRMTQLSMPAAAARPTLDDLRVEPGLPTVVSPREGADIALHEAAPLLREIANDVVER AGGVLFTGFRVASIETFQRFAADFGDPLIGYEFASTPRSQVEGAVYTSTEYPPHRSIPLHNEQSYTREWPMRIWFHCALA ARTGGATPIADSRAVYRALDPALAARFAERELLYVRNFGQGLDLPWQQAFGADDPREVERICAARGIDCEWREGDDGEPL LRTRERCQAVARHPRTGELVWFNQANLFHLSTLDEDMQEALVDAVGIENVPRNVYYGDGAPLEPDALAEIRAVLDGQRIV FPWRTGDVLMLDNMLSAHARDPFEGPRKVVVAMARSHRETGGA >Mature_362_residues GRTRRDPARAPFASFVSPEQKDFRMTQLSMPAAAARPTLDDLRVEPGLPTVVSPREGADIALHEAAPLLREIANDVVERA GGVLFTGFRVASIETFQRFAADFGDPLIGYEFASTPRSQVEGAVYTSTEYPPHRSIPLHNEQSYTREWPMRIWFHCALAA RTGGATPIADSRAVYRALDPALAARFAERELLYVRNFGQGLDLPWQQAFGADDPREVERICAARGIDCEWREGDDGEPLL RTRERCQAVARHPRTGELVWFNQANLFHLSTLDEDMQEALVDAVGIENVPRNVYYGDGAPLEPDALAEIRAVLDGQRIVF PWRTGDVLMLDNMLSAHARDPFEGPRKVVVAMARSHRETGGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40408; Mature: 40277
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRTRRDPARAPFASFVSPEQKDFRMTQLSMPAAAARPTLDDLRVEPGLPTVVSPREGAD CCCCCCCCCCCCHHHHCCCCCHHCCHHHHCCCHHHCCCCHHHCCCCCCCCCEECCCCCCC IALHEAAPLLREIANDVVERAGGVLFTGFRVASIETFQRFAADFGDPLIGYEFASTPRSQ EEHHHHHHHHHHHHHHHHHHCCCEEEECEEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHH VEGAVYTSTEYPPHRSIPLHNEQSYTREWPMRIWFHCALAARTGGATPIADSRAVYRALD HCCEEEECCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH PALAARFAERELLYVRNFGQGLDLPWQQAFGADDPREVERICAARGIDCEWREGDDGEPL HHHHHHHHHHHHHEECCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHH LRTRERCQAVARHPRTGELVWFNQANLFHLSTLDEDMQEALVDAVGIENVPRNVYYGDGA HHHHHHHHHHHCCCCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCEEECCCC PLEPDALAEIRAVLDGQRIVFPWRTGDVLMLDNMLSAHARDPFEGPRKVVVAMARSHRET CCCHHHHHHHHHHHCCCEEEEEECCCCEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHCC GGA CCC >Mature Secondary Structure GRTRRDPARAPFASFVSPEQKDFRMTQLSMPAAAARPTLDDLRVEPGLPTVVSPREGAD CCCCCCCCCCCHHHHCCCCCHHCCHHHHCCCHHHCCCCHHHCCCCCCCCCEECCCCCCC IALHEAAPLLREIANDVVERAGGVLFTGFRVASIETFQRFAADFGDPLIGYEFASTPRSQ EEHHHHHHHHHHHHHHHHHHCCCEEEECEEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHH VEGAVYTSTEYPPHRSIPLHNEQSYTREWPMRIWFHCALAARTGGATPIADSRAVYRALD HCCEEEECCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH PALAARFAERELLYVRNFGQGLDLPWQQAFGADDPREVERICAARGIDCEWREGDDGEPL HHHHHHHHHHHHHEECCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHH LRTRERCQAVARHPRTGELVWFNQANLFHLSTLDEDMQEALVDAVGIENVPRNVYYGDGA HHHHHHHHHHHCCCCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCEEECCCC PLEPDALAEIRAVLDGQRIVFPWRTGDVLMLDNMLSAHARDPFEGPRKVVVAMARSHRET CCCHHHHHHHHHHHCCCEEEEEECCCCEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHCC GGA CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA