Click here to switch to the map view.

The map label for this gene is yjiA [H]

Identifier: 83719451

GI number: 83719451

Start: 198460

End: 199533

Strand: Reverse

Name: yjiA [H]

Synonym: BTH_I0168

Alternate gene names: 83719451

Gene position: 199533-198460 (Counterclockwise)

Preceding gene: 83719434

Following gene: 83721300

Centisome position: 5.24

GC content: 62.57

Gene sequence:

>1074_bases
ATGGCCATTCCCGTCACCATCCTCACGGGCTTTCTCGGCAGCGGCAAGACGACGCTGCTCAAGCGCATCCTGAACGAACA
GCACGGCATGAAGATCGCCGTGATCGAAAACGAGTTCGGCGAAGAGAACATCGACAACGAGATCCTCGTCCAGGATTCGA
CCGAGCAGATCATCCAGATGAGCAACGGCTGCATCTGCTGCACGATCCGCGGCGATCTGGCCCGCGCGCTGGCCGACCTC
GCCGCGAAGAAACGCGACGGCACGTTCGACTTCGACCGCGTGGTGATCGAGACGACGGGCCTCGCGAATCCGGGCCCCGT
CGCGCAGACATTCTTCATCGACAGCGAGATCGCCGACGAATTCCTGCTCGACGCGGTCATCACGCTCGTCGACGCGAAGC
ACGCCGACGCTCAGCTCGACGAGCACGAAGTCGTGCAGCGCCAGGTCGGCTTCGCCGATCGCCTGTTCATCACGAAGGCG
GACCTCGTCGACGACGAGGCGGTGTCCGAGCTCAAGCACCGCCTGCTGCACATGAACCCGAAGGCGGCGATCAAGGTCGT
GAACTTCGGCGATGCGGACATCAAGGAGATCTTCGACCTGCGCGGCTTCAACCTGAACGCGAAGCTCGAGATCGATCCGG
ACTTCCTCGCGGAGGACGAGCACGAGCACGCGCACCACCACGAGCACGGCCACGATCACGCGCATTGCGATCACGATCAC
GGCCATTGCGAGCACGATCACGAGCACGGCCACCACCATCACCACGCACACCACGACGACAAGATCAAGTCGTTCGTCTA
CCGCAACGATCGCCCGTTCGATCCGAACAAGCTCGAGGATTTCCTCGGCGGCATCCTGCAGATCTATGGCGAACGGATGC
TGCGCTACAAGGGCGTGCTGTACATGAAGGGCGTCGACCGCAAGGTCGTGTTCCAGGGCGTGCACCAGATGATGGGCAGC
GATCTCGCCGCGAAGTGGCTGCCGGCCGAGAAGAAGACCAACAAGATGGTGTTCATCGGCGTCGACCTGCCGCGCGACCT
CATCACCGACGGCCTCGACGCCTGCCTCGCGTAA

Upstream 100 bases:

>100_bases
ATATGTTTCAATAAATGGCTGAGCGCTCGGAGAGTTTCGCCGGGCGCGCTGTTTTTTAGCCGTTTTGACCCCGTTTCACG
AACCACAGGCGACCGACGAC

Downstream 100 bases:

>100_bases
CCCGTGCCACATCGTGCGCGAGCGGCGCGCGCCGGCGCACGGCGCGCGCCGGTACGGCGGCGAGCGGGGCGCCCCGCGTG
AGCGCCGCTTCGCCTGCCCG

Product: cobalamin synthesis protein/P47K family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MAIPVTILTGFLGSGKTTLLKRILNEQHGMKIAVIENEFGEENIDNEILVQDSTEQIIQMSNGCICCTIRGDLARALADL
AAKKRDGTFDFDRVVIETTGLANPGPVAQTFFIDSEIADEFLLDAVITLVDAKHADAQLDEHEVVQRQVGFADRLFITKA
DLVDDEAVSELKHRLLHMNPKAAIKVVNFGDADIKEIFDLRGFNLNAKLEIDPDFLAEDEHEHAHHHEHGHDHAHCDHDH
GHCEHDHEHGHHHHHAHHDDKIKSFVYRNDRPFDPNKLEDFLGGILQIYGERMLRYKGVLYMKGVDRKVVFQGVHQMMGS
DLAAKWLPAEKKTNKMVFIGVDLPRDLITDGLDACLA

Sequences:

>Translated_357_residues
MAIPVTILTGFLGSGKTTLLKRILNEQHGMKIAVIENEFGEENIDNEILVQDSTEQIIQMSNGCICCTIRGDLARALADL
AAKKRDGTFDFDRVVIETTGLANPGPVAQTFFIDSEIADEFLLDAVITLVDAKHADAQLDEHEVVQRQVGFADRLFITKA
DLVDDEAVSELKHRLLHMNPKAAIKVVNFGDADIKEIFDLRGFNLNAKLEIDPDFLAEDEHEHAHHHEHGHDHAHCDHDH
GHCEHDHEHGHHHHHAHHDDKIKSFVYRNDRPFDPNKLEDFLGGILQIYGERMLRYKGVLYMKGVDRKVVFQGVHQMMGS
DLAAKWLPAEKKTNKMVFIGVDLPRDLITDGLDACLA
>Mature_356_residues
AIPVTILTGFLGSGKTTLLKRILNEQHGMKIAVIENEFGEENIDNEILVQDSTEQIIQMSNGCICCTIRGDLARALADLA
AKKRDGTFDFDRVVIETTGLANPGPVAQTFFIDSEIADEFLLDAVITLVDAKHADAQLDEHEVVQRQVGFADRLFITKAD
LVDDEAVSELKHRLLHMNPKAAIKVVNFGDADIKEIFDLRGFNLNAKLEIDPDFLAEDEHEHAHHHEHGHDHAHCDHDHG
HCEHDHEHGHHHHHAHHDDKIKSFVYRNDRPFDPNKLEDFLGGILQIYGERMLRYKGVLYMKGVDRKVVFQGVHQMMGSD
LAAKWLPAEKKTNKMVFIGVDLPRDLITDGLDACLA

Specific function: Binds GTP. May function as GTP-dependent regulator [H]

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI126722884, Length=358, Percent_Identity=31.5642458100559, Blast_Score=170, Evalue=2e-42,
Organism=Homo sapiens, GI33469141, Length=358, Percent_Identity=31.5642458100559, Blast_Score=170, Evalue=2e-42,
Organism=Homo sapiens, GI146231952, Length=358, Percent_Identity=31.5642458100559, Blast_Score=168, Evalue=7e-42,
Organism=Homo sapiens, GI148727351, Length=358, Percent_Identity=31.2849162011173, Blast_Score=166, Evalue=3e-41,
Organism=Homo sapiens, GI223941779, Length=358, Percent_Identity=30.4469273743017, Blast_Score=160, Evalue=2e-39,
Organism=Homo sapiens, GI223941776, Length=359, Percent_Identity=30.6406685236769, Blast_Score=152, Evalue=3e-37,
Organism=Homo sapiens, GI119120938, Length=145, Percent_Identity=42.7586206896552, Blast_Score=124, Evalue=1e-28,
Organism=Escherichia coli, GI87082430, Length=347, Percent_Identity=39.193083573487, Blast_Score=231, Evalue=6e-62,
Organism=Escherichia coli, GI1788499, Length=172, Percent_Identity=29.0697674418605, Blast_Score=64, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6324356, Length=225, Percent_Identity=30.2222222222222, Blast_Score=122, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 40217; Mature: 40086

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIPVTILTGFLGSGKTTLLKRILNEQHGMKIAVIENEFGEENIDNEILVQDSTEQIIQM
CCCCHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEECCHHHHHHH
SNGCICCTIRGDLARALADLAAKKRDGTFDFDRVVIETTGLANPGPVAQTFFIDSEIADE
CCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEEECHHHHHH
FLLDAVITLVDAKHADAQLDEHEVVQRQVGFADRLFITKADLVDDEAVSELKHRLLHMNP
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHEEEEEHHCCCHHHHHHHHHHHHCCCC
KAAIKVVNFGDADIKEIFDLRGFNLNAKLEIDPDFLAEDEHEHAHHHEHGHDHAHCDHDH
HHEEEEEECCCHHHHHHHHHCCCCCCEEEEECCHHCCCCCHHHHHHCCCCCCCCCCCCCC
GHCEHDHEHGHHHHHAHHDDKIKSFVYRNDRPFDPNKLEDFLGGILQIYGERMLRYKGVL
CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEE
YMKGVDRKVVFQGVHQMMGSDLAAKWLPAEKKTNKMVFIGVDLPRDLITDGLDACLA
EECCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
AIPVTILTGFLGSGKTTLLKRILNEQHGMKIAVIENEFGEENIDNEILVQDSTEQIIQM
CCCHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEECCHHHHHHH
SNGCICCTIRGDLARALADLAAKKRDGTFDFDRVVIETTGLANPGPVAQTFFIDSEIADE
CCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEEECHHHHHH
FLLDAVITLVDAKHADAQLDEHEVVQRQVGFADRLFITKADLVDDEAVSELKHRLLHMNP
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHEEEEEHHCCCHHHHHHHHHHHHCCCC
KAAIKVVNFGDADIKEIFDLRGFNLNAKLEIDPDFLAEDEHEHAHHHEHGHDHAHCDHDH
HHEEEEEECCCHHHHHHHHHCCCCCCEEEEECCHHCCCCCHHHHHHCCCCCCCCCCCCCC
GHCEHDHEHGHHHHHAHHDDKIKSFVYRNDRPFDPNKLEDFLGGILQIYGERMLRYKGVL
CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEE
YMKGVDRKVVFQGVHQMMGSDLAAKWLPAEKKTNKMVFIGVDLPRDLITDGLDACLA
EECCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 1650347 [H]