Click here to switch to the map view.

The map label for this gene is 83719408

Identifier: 83719408

GI number: 83719408

Start: 3006659

End: 3008023

Strand: Reverse

Name: 83719408

Synonym: BTH_I2637

Alternate gene names: NA

Gene position: 3008023-3006659 (Counterclockwise)

Preceding gene: 83721071

Following gene: 83718708

Centisome position: 78.97

GC content: 69.45

Gene sequence:

>1365_bases
GTGAGCGCACGCGGGATCGTGACGAAGCACGTGCTGACGGCGTGCTGCGCAGCAGCGTTGGCATGTGCGGCGCAGCACGC
CGCCGCGCAGCCGACAAAGAATCCGTCCGTGCAGACCGTCGACTACACGACGCGTAGCGGCGACACGCTGTACGACGTCG
CGGCCCGCTATCTGCAAGGGTCGGACGACTGGCCGCTCGTCGCGCAACTGAACGACGTGCCGGTGCCGAAGCATCTGCAG
CCGGGCGTCGTGCTGAAGCTGCCCGCCGCGCGGCTGCGCAAGGAGCGGCTGTCGGCGCGGGTGATCGCCGCGCACGGCAC
GGTCGAGAGCGCGGGGCGCGGCTCCGCGCAGTTCGCGCCCGTCGCCGTCGATGCGACGCTCACGGAAGGCGACCGCCTGC
GCACGGGCGCGAACGCGTTCGTCACGCTCGAACTCTCGGACGGCACGCACCTGAGCCTGCCGCCCGACAGCCAGATCGAT
CTCGCGACGTTGCGCCGCACGGTGCTCACGGGCACGCTCGAGCGCGTGATCGATCTGCGCCGCGGCTCGGTCGACAGCGA
AGTCACCCATCTGAAGAAGAAGGACGACCGCTTCCAGATCCGCTCGCCGTCGGTCGTCGCCGGCGTGCGCGGCACGCGCT
TTCGCGTGAATTACGACAAGGACGGCCGCGCGTCGACGACAGTCGAAGTGCTTGACGGCACGGTCGGCGTCGCGCCGAGC
GCGAAGCGTTCGGCCGACACGCTCGTCCATGCGAACTTCGGCAACGTGACGAGCGCGGGCGGCGTCGTCGGCAGCCCGAT
CGCGCTGCTCGGCGCGCCGCAGCTCGCCGATCCGGCGAAAGTCCAGGATGATCCGCAGGTCGCGTTCGATCTCGTGCCGC
TCGGCGGCGCGCAGAATTACCATGTGGAGATCGCGCGCGACGCGGGCCTGTACGACCTGTTTAGGGAAGTGCAGGTGACG
GCGCCGCGCGCGACGTTCGCCGACGTGCCTGACGGGACCTACTTCGTCCGGATCTCGGCGATCGATTCGAACGGCCTCGA
AGGTCAGCCGCGCATCTACGCGTTCGAGCGCCGCCGCCTCGGCATCGACGCGTCGGCGGCGCCCGCCGACGGCGGCTATG
CGTTCCGCTGGTCGACGACGCAAGACAGCCAGTCGGCCGGCACGACGCGCTTTCGCTTCGTGCTGTCGCGCTCGAAGGAT
CTGAGCAACCCGATCGTCGACCAGGTCGACGTGCAGGGCGGGCGCATCGCCGTGTCGAACCTGAAGCCGGGCGACTACTA
CTGGAGCGTGATCGCGGAGCGCTACGAAGGCGGCCGTTTCTACGAAAAGGCCAGCGCGGTCAACGCATTCACGATCGCGC
GCTGA

Upstream 100 bases:

>100_bases
TGCGCACGAAGCTCGGCCTGCGTCCGGAGAACGGCTACCGCCTCGCGCCGATCTACGGATACGGCTACCGCCTCGAGCGC
GTGATGCAGGGGGACGCCGA

Downstream 100 bases:

>100_bases
TGGGCGGCGGATGAGATTCGACCGCACGCAACGGCGGCGGCTGCTCGGCCGCCGCTTTCTCGTCGAGTGGATCGCGATCG
GCTGTCTCGGGGTCGCGGTG

Product: LysM domain-containing protein

Products: NA

Alternate protein names: LysM Domain-Containing Protein; LysM Cell Wall-Like Protein; LysM Domain-Containing; LysM Motif-Containing Protein; LysM Domain Protein

Number of amino acids: Translated: 454; Mature: 453

Protein sequence:

>454_residues
MSARGIVTKHVLTACCAAALACAAQHAAAQPTKNPSVQTVDYTTRSGDTLYDVAARYLQGSDDWPLVAQLNDVPVPKHLQ
PGVVLKLPAARLRKERLSARVIAAHGTVESAGRGSAQFAPVAVDATLTEGDRLRTGANAFVTLELSDGTHLSLPPDSQID
LATLRRTVLTGTLERVIDLRRGSVDSEVTHLKKKDDRFQIRSPSVVAGVRGTRFRVNYDKDGRASTTVEVLDGTVGVAPS
AKRSADTLVHANFGNVTSAGGVVGSPIALLGAPQLADPAKVQDDPQVAFDLVPLGGAQNYHVEIARDAGLYDLFREVQVT
APRATFADVPDGTYFVRISAIDSNGLEGQPRIYAFERRRLGIDASAAPADGGYAFRWSTTQDSQSAGTTRFRFVLSRSKD
LSNPIVDQVDVQGGRIAVSNLKPGDYYWSVIAERYEGGRFYEKASAVNAFTIAR

Sequences:

>Translated_454_residues
MSARGIVTKHVLTACCAAALACAAQHAAAQPTKNPSVQTVDYTTRSGDTLYDVAARYLQGSDDWPLVAQLNDVPVPKHLQ
PGVVLKLPAARLRKERLSARVIAAHGTVESAGRGSAQFAPVAVDATLTEGDRLRTGANAFVTLELSDGTHLSLPPDSQID
LATLRRTVLTGTLERVIDLRRGSVDSEVTHLKKKDDRFQIRSPSVVAGVRGTRFRVNYDKDGRASTTVEVLDGTVGVAPS
AKRSADTLVHANFGNVTSAGGVVGSPIALLGAPQLADPAKVQDDPQVAFDLVPLGGAQNYHVEIARDAGLYDLFREVQVT
APRATFADVPDGTYFVRISAIDSNGLEGQPRIYAFERRRLGIDASAAPADGGYAFRWSTTQDSQSAGTTRFRFVLSRSKD
LSNPIVDQVDVQGGRIAVSNLKPGDYYWSVIAERYEGGRFYEKASAVNAFTIAR
>Mature_453_residues
SARGIVTKHVLTACCAAALACAAQHAAAQPTKNPSVQTVDYTTRSGDTLYDVAARYLQGSDDWPLVAQLNDVPVPKHLQP
GVVLKLPAARLRKERLSARVIAAHGTVESAGRGSAQFAPVAVDATLTEGDRLRTGANAFVTLELSDGTHLSLPPDSQIDL
ATLRRTVLTGTLERVIDLRRGSVDSEVTHLKKKDDRFQIRSPSVVAGVRGTRFRVNYDKDGRASTTVEVLDGTVGVAPSA
KRSADTLVHANFGNVTSAGGVVGSPIALLGAPQLADPAKVQDDPQVAFDLVPLGGAQNYHVEIARDAGLYDLFREVQVTA
PRATFADVPDGTYFVRISAIDSNGLEGQPRIYAFERRRLGIDASAAPADGGYAFRWSTTQDSQSAGTTRFRFVLSRSKDL
SNPIVDQVDVQGGRIAVSNLKPGDYYWSVIAERYEGGRFYEKASAVNAFTIAR

Specific function: Unknown

COG id: COG4254

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48616; Mature: 48485

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSARGIVTKHVLTACCAAALACAAQHAAAQPTKNPSVQTVDYTTRSGDTLYDVAARYLQG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCC
SDDWPLVAQLNDVPVPKHLQPGVVLKLPAARLRKERLSARVIAAHGTVESAGRGSAQFAP
CCCCCEEEECCCCCCCCCCCCCEEEECCHHHHHHHHHCEEEEEECCCCCCCCCCCCEEEE
VAVDATLTEGDRLRTGANAFVTLELSDGTHLSLPPDSQIDLATLRRTVLTGTLERVIDLR
EEEEEEECCCCCEECCCCEEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
RGSVDSEVTHLKKKDDRFQIRSPSVVAGVRGTRFRVNYDKDGRASTTVEVLDGTVGVAPS
CCCCCHHHHHHHCCCCCEEECCCCEEECCCCCEEEEEECCCCCCCCEEEEECCCCCCCCC
AKRSADTLVHANFGNVTSAGGVVGSPIALLGAPQLADPAKVQDDPQVAFDLVPLGGAQNY
CCCCCCEEEEECCCCCCCCCCCCCCCHHEECCCCCCCCCCCCCCCCEEEEEEECCCCCCE
HVEIARDAGLYDLFREVQVTAPRATFADVPDGTYFVRISAIDSNGLEGQPRIYAFERRRL
EEEEECCCCHHHHHHHHEEECCCCEECCCCCCEEEEEEEEECCCCCCCCCCEEEEECCCC
GIDASAAPADGGYAFRWSTTQDSQSAGTTRFRFVLSRSKDLSNPIVDQVDVQGGRIAVSN
CCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCHHEECCCCEEEEEC
LKPGDYYWSVIAERYEGGRFYEKASAVNAFTIAR
CCCCHHHHHHHHHHHCCCCEEHHHCCCCEEEECC
>Mature Secondary Structure 
SARGIVTKHVLTACCAAALACAAQHAAAQPTKNPSVQTVDYTTRSGDTLYDVAARYLQG
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCC
SDDWPLVAQLNDVPVPKHLQPGVVLKLPAARLRKERLSARVIAAHGTVESAGRGSAQFAP
CCCCCEEEECCCCCCCCCCCCCEEEECCHHHHHHHHHCEEEEEECCCCCCCCCCCCEEEE
VAVDATLTEGDRLRTGANAFVTLELSDGTHLSLPPDSQIDLATLRRTVLTGTLERVIDLR
EEEEEEECCCCCEECCCCEEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
RGSVDSEVTHLKKKDDRFQIRSPSVVAGVRGTRFRVNYDKDGRASTTVEVLDGTVGVAPS
CCCCCHHHHHHHCCCCCEEECCCCEEECCCCCEEEEEECCCCCCCCEEEEECCCCCCCCC
AKRSADTLVHANFGNVTSAGGVVGSPIALLGAPQLADPAKVQDDPQVAFDLVPLGGAQNY
CCCCCCEEEEECCCCCCCCCCCCCCCHHEECCCCCCCCCCCCCCCCEEEEEEECCCCCCE
HVEIARDAGLYDLFREVQVTAPRATFADVPDGTYFVRISAIDSNGLEGQPRIYAFERRRL
EEEEECCCCHHHHHHHHEEECCCCEECCCCCCEEEEEEEEECCCCCCCCCCEEEEECCCC
GIDASAAPADGGYAFRWSTTQDSQSAGTTRFRFVLSRSKDLSNPIVDQVDVQGGRIAVSN
CCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCHHEECCCCEEEEEC
LKPGDYYWSVIAERYEGGRFYEKASAVNAFTIAR
CCCCHHHHHHHHHHHCCCCEEHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA