| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is yggG [C]
Identifier: 83719400
GI number: 83719400
Start: 185747
End: 186787
Strand: Reverse
Name: yggG [C]
Synonym: BTH_I0154
Alternate gene names: 83719400
Gene position: 186787-185747 (Counterclockwise)
Preceding gene: 83720417
Following gene: 83720893
Centisome position: 4.9
GC content: 73.39
Gene sequence:
>1041_bases GTGCCGGCTAAGCTGCGCGCCGCACGCGCCGCGCTCACGCTCGTGGGCGGCGTCGCGCTCGGCGTCGCGGGCCCGGCGCT CGGGCTCGAGCTGTGCATGGCCGAACCGATGCTCGTCGCCGACAACGGCACGCCGTCCGCGCCGCCTGCGCCGAGCGCGC CTTCGGCCGCCGCCCCGGCGGCGCCCGCCGCGGCGCCCGCTGCCGGCAACCCGAAACCATATGGGCTCGGCGATCAGCAG GTGCGCTACGGCAACGCGATCGTGTTTCGCAGCCTGATTCCGTCGCCGCTCCTCGAACAACTGACCGACAACGAGTACCG GCAGACCGTGCAGGACGCCGCGCAGCGCGAGCGCCTGCTGCCGCCGAACAACGCGCGCGTGAAGCGGCTGCGCACGATCG TCACGCGGCTCGCGCCGTATGCGGTCAAGTGGAGCGAGCGCGTGAAGGGCTGGAACTGGGAAATCGAGGTGCTGCGCTCG CGCTCGATCCGCGCGTTCTGCCTGCCCGGCGGCAAGGTGCTCGTCGACAGCGGGCTGCTCGACCGGCTGCGCCTCACCGA CGACGAGATCGGCGTGCTGTTCGCGCACGAGATCGCGCACGCGCTGCGCGAACATGCGCGCTCGAGCCTCGGCGAGCAAC AGGCCGCGTCACTCGGCACGGGCGCGACGCCGCTGCCGCCCCTGTTCGGGCTCTCGGAGCCGCTGCCCGCGCCGCTTGGC GTCGTCGAGCGCTTCGCGTCGGTCCGCTACGATCCGACCGACGAAACCGAAGCCGACGTGATCGGCGGCGACATCGCCGC GCGCGCGGGCTTCGATCCGCGCGCGGCGATCACGCTGTGGGACAAGCTCGCGGTCGCGACGCGCGCCGACAAGGACAACG GCTTCATCTACGCGCACCCGTACGACACGCGGCGGCGCAACGATCTGCGCAAGCGCCTCGCCGACCTGATGCCGCTCTAC CGGAAGGCGCTCGTCAAGAACGCCGCCGCGGGCGCGGCGGCCGGCGCGAAGCAGCGCGGCGCCGCGACGGCGAACCGCTG A
Upstream 100 bases:
>100_bases GACTATTTCCTCGTCTGCGCGGCGCTCGGCATCCCCGGGATGCTGCTGCTGTTCAAGATCGCGCCGTGGAACGGCAGCAT GTCCGGCAACGAGGCCGCCC
Downstream 100 bases:
>100_bases GCGACGGCAGTCCGGCGAAGCCGTTAGCGTGCGGCGGGCGCGCCGCCGACGATCCGCACATCGGTTCGCTCGTCAGCCGG CGCGCGGCCGCCCGCGCCGG
Product: M48 family peptidase
Products: NA
Alternate protein names: M48 Family Peptidase; Zn-Dependent Protease With Chaperone Function; Lipoprotein; Zn-Dependent Protease; Peptidase M; Exported Peptidase; HtpX Protein; Zinc Metallopeptidase; Peptidase Family M; Membrane-Associated Zinc Metalloprotease Peptidase; Peptidase Family; M48 Family Zinc Metallopeptidase; Signal Peptide; M48 Family Metalloprotease; Zinc Metalloprotease; M48-Family Peptidase; Zn-Dependent Protease With Chaperone Function Protein; Signal Peptide Protein
Number of amino acids: Translated: 346; Mature: 345
Protein sequence:
>346_residues MPAKLRAARAALTLVGGVALGVAGPALGLELCMAEPMLVADNGTPSAPPAPSAPSAAAPAAPAAAPAAGNPKPYGLGDQQ VRYGNAIVFRSLIPSPLLEQLTDNEYRQTVQDAAQRERLLPPNNARVKRLRTIVTRLAPYAVKWSERVKGWNWEIEVLRS RSIRAFCLPGGKVLVDSGLLDRLRLTDDEIGVLFAHEIAHALREHARSSLGEQQAASLGTGATPLPPLFGLSEPLPAPLG VVERFASVRYDPTDETEADVIGGDIAARAGFDPRAAITLWDKLAVATRADKDNGFIYAHPYDTRRRNDLRKRLADLMPLY RKALVKNAAAGAAAGAKQRGAATANR
Sequences:
>Translated_346_residues MPAKLRAARAALTLVGGVALGVAGPALGLELCMAEPMLVADNGTPSAPPAPSAPSAAAPAAPAAAPAAGNPKPYGLGDQQ VRYGNAIVFRSLIPSPLLEQLTDNEYRQTVQDAAQRERLLPPNNARVKRLRTIVTRLAPYAVKWSERVKGWNWEIEVLRS RSIRAFCLPGGKVLVDSGLLDRLRLTDDEIGVLFAHEIAHALREHARSSLGEQQAASLGTGATPLPPLFGLSEPLPAPLG VVERFASVRYDPTDETEADVIGGDIAARAGFDPRAAITLWDKLAVATRADKDNGFIYAHPYDTRRRNDLRKRLADLMPLY RKALVKNAAAGAAAGAKQRGAATANR >Mature_345_residues PAKLRAARAALTLVGGVALGVAGPALGLELCMAEPMLVADNGTPSAPPAPSAPSAAAPAAPAAAPAAGNPKPYGLGDQQV RYGNAIVFRSLIPSPLLEQLTDNEYRQTVQDAAQRERLLPPNNARVKRLRTIVTRLAPYAVKWSERVKGWNWEIEVLRSR SIRAFCLPGGKVLVDSGLLDRLRLTDDEIGVLFAHEIAHALREHARSSLGEQQAASLGTGATPLPPLFGLSEPLPAPLGV VERFASVRYDPTDETEADVIGGDIAARAGFDPRAAITLWDKLAVATRADKDNGFIYAHPYDTRRRNDLRKRLADLMPLYR KALVKNAAAGAAAGAKQRGAATANR
Specific function: Seems To Regulate The Expression Of Speb. [C]
COG id: COG0501
COG function: function code O; Zn-dependent protease with chaperone function
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082185, Length=213, Percent_Identity=24.8826291079812, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1788840, Length=176, Percent_Identity=28.4090909090909, Blast_Score=63, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6322940, Length=244, Percent_Identity=28.2786885245902, Blast_Score=80, Evalue=4e-16,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.4.24.- [C]
Molecular weight: Translated: 36857; Mature: 36725
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAKLRAARAALTLVGGVALGVAGPALGLELCMAEPMLVADNGTPSAPPAPSAPSAAAPA CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCC APAAAPAAGNPKPYGLGDQQVRYGNAIVFRSLIPSPLLEQLTDNEYRQTVQDAAQRERLL CCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHCCC PPNNARVKRLRTIVTRLAPYAVKWSERVKGWNWEIEVLRSRSIRAFCLPGGKVLVDSGLL CCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEEECCCCCEEEECCCCEEEECCCCH DRLRLTDDEIGVLFAHEIAHALREHARSSLGEQQAASLGTGATPLPPLFGLSEPLPAPLG HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCHHH VVERFASVRYDPTDETEADVIGGDIAARAGFDPRAAITLWDKLAVATRADKDNGFIYAHP HHHHHHHCCCCCCCCCCHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECC YDTRRRNDLRKRLADLMPLYRKALVKNAAAGAAAGAKQRGAATANR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCC >Mature Secondary Structure PAKLRAARAALTLVGGVALGVAGPALGLELCMAEPMLVADNGTPSAPPAPSAPSAAAPA CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCC APAAAPAAGNPKPYGLGDQQVRYGNAIVFRSLIPSPLLEQLTDNEYRQTVQDAAQRERLL CCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHCCC PPNNARVKRLRTIVTRLAPYAVKWSERVKGWNWEIEVLRSRSIRAFCLPGGKVLVDSGLL CCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEEECCCCCEEEECCCCEEEECCCCH DRLRLTDDEIGVLFAHEIAHALREHARSSLGEQQAASLGTGATPLPPLFGLSEPLPAPLG HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCHHH VVERFASVRYDPTDETEADVIGGDIAARAGFDPRAAITLWDKLAVATRADKDNGFIYAHP HHHHHHHCCCCCCCCCCHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECC YDTRRRNDLRKRLADLMPLYRKALVKNAAAGAAAGAKQRGAATANR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA