| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is yhbJ [C]
Identifier: 83719398
GI number: 83719398
Start: 534924
End: 535817
Strand: Reverse
Name: yhbJ [C]
Synonym: BTH_I0482
Alternate gene names: 83719398
Gene position: 535817-534924 (Counterclockwise)
Preceding gene: 83720779
Following gene: 83718707
Centisome position: 14.07
GC content: 67.56
Gene sequence:
>894_bases ATGCGCATTGTCCTCATCACCGGCATCTCCGGCTCCGGCAAGTCCGTCGCACTGAACGCGCTCGAGGATGCGGGCTACTA TTGCGTCGACAACCTGCCGCCGCACGTGCTGCCCGAACTCGCCCGCCACCTCGCGAACGAAGGCCAGAACCGGCTCGCCG TCGCGATCGACGCGCGCTCGAGCGCGTCGCTCGACGAGATGCCGGGCCTCATCCGCGCGCTGTCGCGCGAGCACGACGTG CGCGTGCTGTTCCTGAACGCGAGCACGCAGTCGCTGATCCAGCGCTTCTCCGAGACGCGCCGCCGCCATCCGCTGTCGGG CTCGCCGTCGCACGACGCGGACGTCGGCCTTCTCGTATCGCTCGAAGAGGCGATCGAGCGCGAGCGCGACCTCGTCGCGC CGCTCGCCGAATTCGGCCATCAGATCGACACGAGCAATCTGCGCGCGAACGTGCTGCGCACGTGGGTCAAGCGCTTCATC GAGCAGAAGAACGACGATCTCGTGCTGATGTTCGAATCGTTCGGCTTCAAACGCGGCGTGCCGCTCGACGCCGATTTCAT GTTCGACGTCCGCGCGCTGCCGAACCCGTATTACGACCACGAGCTGCGGCCGCTCACCGGGCTCGACCAGCCGGTCGTCG CGTTTCTCGACGCGCTGCCCGTCGTCCATCAGATGCTCGGCGACATCGAGTCGTTTCTCATCAAGTGGCTGCCGCATTTC CGCGAGGACAACCGCAGCTACCTGACGGTCGCGATCGGCTGCACGGGCGGCCAGCACCGGTCGGTGTTCCTCGCGGAGAC GCTCGCCGCGCGTCTGTCGCGGCAGGCCAACGTGATCGTGCGGCATCGTGACGCGCCCGTCGCCGTGGACGCGTCGTCGC GGCTCGTGACCTAG
Upstream 100 bases:
>100_bases CAGTTCCCCGGCAAGCTCGTGTAACCCGCGCCGGCTTCGCGCGTGCCACGCTCGCGCAACGAGCCGGTGCTATGATGAAA CGTCAGGATTTCCTCTTTCC
Downstream 100 bases:
>100_bases CGCCGCTCACCTCTTCCGGGCCCGCCATGTCCTCTCTGTCGACCACGCTCATCGATTTGCCGCTCTTCCCGCTGCACACG GTGCTGTTCCCTGGAGGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MRIVLITGISGSGKSVALNALEDAGYYCVDNLPPHVLPELARHLANEGQNRLAVAIDARSSASLDEMPGLIRALSREHDV RVLFLNASTQSLIQRFSETRRRHPLSGSPSHDADVGLLVSLEEAIERERDLVAPLAEFGHQIDTSNLRANVLRTWVKRFI EQKNDDLVLMFESFGFKRGVPLDADFMFDVRALPNPYYDHELRPLTGLDQPVVAFLDALPVVHQMLGDIESFLIKWLPHF REDNRSYLTVAIGCTGGQHRSVFLAETLAARLSRQANVIVRHRDAPVAVDASSRLVT
Sequences:
>Translated_297_residues MRIVLITGISGSGKSVALNALEDAGYYCVDNLPPHVLPELARHLANEGQNRLAVAIDARSSASLDEMPGLIRALSREHDV RVLFLNASTQSLIQRFSETRRRHPLSGSPSHDADVGLLVSLEEAIERERDLVAPLAEFGHQIDTSNLRANVLRTWVKRFI EQKNDDLVLMFESFGFKRGVPLDADFMFDVRALPNPYYDHELRPLTGLDQPVVAFLDALPVVHQMLGDIESFLIKWLPHF REDNRSYLTVAIGCTGGQHRSVFLAETLAARLSRQANVIVRHRDAPVAVDASSRLVT >Mature_297_residues MRIVLITGISGSGKSVALNALEDAGYYCVDNLPPHVLPELARHLANEGQNRLAVAIDARSSASLDEMPGLIRALSREHDV RVLFLNASTQSLIQRFSETRRRHPLSGSPSHDADVGLLVSLEEAIERERDLVAPLAEFGHQIDTSNLRANVLRTWVKRFI EQKNDDLVLMFESFGFKRGVPLDADFMFDVRALPNPYYDHELRPLTGLDQPVVAFLDALPVVHQMLGDIESFLIKWLPHF REDNRSYLTVAIGCTGGQHRSVFLAETLAARLSRQANVIVRHRDAPVAVDASSRLVT
Specific function: Displays ATPase and GTPase activities [H]
COG id: COG1660
COG function: function code R; Predicted P-loop-containing kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0042 family [H]
Homologues:
Organism=Escherichia coli, GI1789598, Length=293, Percent_Identity=49.4880546075085, Blast_Score=248, Evalue=2e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005337 [H]
Pfam domain/function: PF03668 ATP_bind_2 [H]
EC number: NA
Molecular weight: Translated: 33117; Mature: 33117
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIVLITGISGSGKSVALNALEDAGYYCVDNLPPHVLPELARHLANEGQNRLAVAIDARS CEEEEEECCCCCCCEEEEEEHHCCCEEEECCCCHHHHHHHHHHHHCCCCCEEEEEEECCC SASLDEMPGLIRALSREHDVRVLFLNASTQSLIQRFSETRRRHPLSGSPSHDADVGLLVS CCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEE LEEAIERERDLVAPLAEFGHQIDTSNLRANVLRTWVKRFIEQKNDDLVLMFESFGFKRGV HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC PLDADFMFDVRALPNPYYDHELRPLTGLDQPVVAFLDALPVVHQMLGDIESFLIKWLPHF CCCCHHEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REDNRSYLTVAIGCTGGQHRSVFLAETLAARLSRQANVIVRHRDAPVAVDASSRLVT CCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEECCCCCCCC >Mature Secondary Structure MRIVLITGISGSGKSVALNALEDAGYYCVDNLPPHVLPELARHLANEGQNRLAVAIDARS CEEEEEECCCCCCCEEEEEEHHCCCEEEECCCCHHHHHHHHHHHHCCCCCEEEEEEECCC SASLDEMPGLIRALSREHDVRVLFLNASTQSLIQRFSETRRRHPLSGSPSHDADVGLLVS CCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEE LEEAIERERDLVAPLAEFGHQIDTSNLRANVLRTWVKRFIEQKNDDLVLMFESFGFKRGV HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC PLDADFMFDVRALPNPYYDHELRPLTGLDQPVVAFLDALPVVHQMLGDIESFLIKWLPHF CCCCHHEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REDNRSYLTVAIGCTGGQHRSVFLAETLAARLSRQANVIVRHRDAPVAVDASSRLVT CCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA