| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83719360
Identifier: 83719360
GI number: 83719360
Start: 52752
End: 54011
Strand: Reverse
Name: 83719360
Synonym: BTH_I0049
Alternate gene names: NA
Gene position: 54011-52752 (Counterclockwise)
Preceding gene: 83719867
Following gene: 83720013
Centisome position: 1.42
GC content: 66.83
Gene sequence:
>1260_bases ATGAAGCCGCTTTCCCCCAACATGAAGCGCACGCTCGCCGGCGCGTGCATCGGCGCCGCGGGATTTCTCGCACAGCATGC GGCGTTCGCGCAGAGCTGCGGGCTCGCGAACGGCAAGCCCGCGACCGGCGCGCCGATTCCGATCGGCGCGATCGTCGGCA AGACCGGCCCCGACGATTTCAGCTCGTCGACGCGCGCGGCCGCCGCGTACTTCAAATGCGTGAACGCGAACGGCGGCATC AACGGCCGGCCGGTCCAGTATCTCGTCGAAGACGATCAATGGAATCCGGAAACGGCGTCGCAGGTCGCCTCGAAGCTCGT GCGCGACCGCAAGGTGCTCGCGCTCGCGGGCAACGCGAGCTTCGTCGAATGCGGCGCGAACGCGAAGTTCTACGAGCAGG AGAACGTGATCGCGATAGCGGGCGTCGGCGTGCCGCGCGAATGCTATTTCGCGCGCAACTACGTGCCGCTCAACATGGGG CCGCGTCTGTCGATGACGCAAGCCGCGCTGTACGCGAAGCAGCAGTACAAGGCGACGCGAATGGTCTGCATCGCGCCGAA CATCCCGAGCCTCGGCGCGTGGTCGTGCGAGGGGCCGGTGCTGTGGGGCAAGCGCAACGGCGTGAGCGTCGATACGATCG TGATGGACCCCGATTCCGCCGATCCGACGTCGGTCGTGCTGCAGGCGGCGTCGAAAAATCCTCAGGCGATCCTGCTCGGG CTGCCGAAGGGGCTGATGGTGCCGATCCTGTCGGCCGCCGAGCAGCAGAACCTCGGCCGGCGGATTCACTTCGTCTCGGC GGCGTCCGGCTACGACCTCGGCGTACCGAAGGCGATCGGCCCGTACTGGAAGGGCAACTTCGACGTGAATCTCGAATTCC AGCCGCTCGACGCGCCGACGCCGGACAACCAGAACTGGCTCGCGGTCATGAACAAATACGGCGAGAAGAAAGACCCCCGC GACACGTTCTCGCAGGCCGGCTATCTCGCCGCGCGGCTCGTGACCGATACGCTGCTGAAACTGCCCGCGAACCAGCTCGA CCGCGCGCACGTGACGGCCGCGCTGCGCGAGGTGAAGGACTTCCGCAGCGACATCCTGTGCGGTCCGTTCTACGTCGGCG CGGGCGAGCGGCACAACGCGAACAACGCGGGCCGGATGGCGCAATCGACGGGCGCGGGCTGGAAAACCGTGTCGACGTGC CAGGCGGTCGACGATCCGCAACTCGTCGACATCCGCGCGGCCGAAAAGAAGATGCACTGA
Upstream 100 bases:
>100_bases GCGCGAGAACCGGCGAACCGCAGCGACACCGAAGCATCCACGCAGCACCCGAGGGCGCGGCCCGCAAGCGCCGCGCCCCA CGAAAACACCAGGAGACACG
Downstream 100 bases:
>100_bases CGCCATGAACGCGATCGACTTCGTTCCTTACCTGATCTCCGGGCTCGGCGTCGGCGCGGTCTACGCGCTGTCGGGCGTCG GCCTCGTCGTGCTGTATCGC
Product: branched-chain amino acid ABC transporter periplasmic amino acid-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MKPLSPNMKRTLAGACIGAAGFLAQHAAFAQSCGLANGKPATGAPIPIGAIVGKTGPDDFSSSTRAAAAYFKCVNANGGI NGRPVQYLVEDDQWNPETASQVASKLVRDRKVLALAGNASFVECGANAKFYEQENVIAIAGVGVPRECYFARNYVPLNMG PRLSMTQAALYAKQQYKATRMVCIAPNIPSLGAWSCEGPVLWGKRNGVSVDTIVMDPDSADPTSVVLQAASKNPQAILLG LPKGLMVPILSAAEQQNLGRRIHFVSAASGYDLGVPKAIGPYWKGNFDVNLEFQPLDAPTPDNQNWLAVMNKYGEKKDPR DTFSQAGYLAARLVTDTLLKLPANQLDRAHVTAALREVKDFRSDILCGPFYVGAGERHNANNAGRMAQSTGAGWKTVSTC QAVDDPQLVDIRAAEKKMH
Sequences:
>Translated_419_residues MKPLSPNMKRTLAGACIGAAGFLAQHAAFAQSCGLANGKPATGAPIPIGAIVGKTGPDDFSSSTRAAAAYFKCVNANGGI NGRPVQYLVEDDQWNPETASQVASKLVRDRKVLALAGNASFVECGANAKFYEQENVIAIAGVGVPRECYFARNYVPLNMG PRLSMTQAALYAKQQYKATRMVCIAPNIPSLGAWSCEGPVLWGKRNGVSVDTIVMDPDSADPTSVVLQAASKNPQAILLG LPKGLMVPILSAAEQQNLGRRIHFVSAASGYDLGVPKAIGPYWKGNFDVNLEFQPLDAPTPDNQNWLAVMNKYGEKKDPR DTFSQAGYLAARLVTDTLLKLPANQLDRAHVTAALREVKDFRSDILCGPFYVGAGERHNANNAGRMAQSTGAGWKTVSTC QAVDDPQLVDIRAAEKKMH >Mature_419_residues MKPLSPNMKRTLAGACIGAAGFLAQHAAFAQSCGLANGKPATGAPIPIGAIVGKTGPDDFSSSTRAAAAYFKCVNANGGI NGRPVQYLVEDDQWNPETASQVASKLVRDRKVLALAGNASFVECGANAKFYEQENVIAIAGVGVPRECYFARNYVPLNMG PRLSMTQAALYAKQQYKATRMVCIAPNIPSLGAWSCEGPVLWGKRNGVSVDTIVMDPDSADPTSVVLQAASKNPQAILLG LPKGLMVPILSAAEQQNLGRRIHFVSAASGYDLGVPKAIGPYWKGNFDVNLEFQPLDAPTPDNQNWLAVMNKYGEKKDPR DTFSQAGYLAARLVTDTLLKLPANQLDRAHVTAALREVKDFRSDILCGPFYVGAGERHNANNAGRMAQSTGAGWKTVSTC QAVDDPQLVDIRAAEKKMH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44735; Mature: 44735
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPLSPNMKRTLAGACIGAAGFLAQHAAFAQSCGLANGKPATGAPIPIGAIVGKTGPDDF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEECCCCCCCC SSSTRAAAAYFKCVNANGGINGRPVQYLVEDDQWNPETASQVASKLVRDRKVLALAGNAS CCHHHHHEEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCEEEEEECCCC FVECGANAKFYEQENVIAIAGVGVPRECYFARNYVPLNMGPRLSMTQAALYAKQQYKATR EEEECCCCEEEECCCEEEEEECCCCHHHHEECCEEEECCCCCCCHHHHHHHHHHHCCCEE MVCIAPNIPSLGAWSCEGPVLWGKRNGVSVDTIVMDPDSADPTSVVLQAASKNPQAILLG EEEECCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCEEEEE LPKGLMVPILSAAEQQNLGRRIHFVSAASGYDLGVPKAIGPYWKGNFDVNLEFQPLDAPT CCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCC PDNQNWLAVMNKYGEKKDPRDTFSQAGYLAARLVTDTLLKLPANQLDRAHVTAALREVKD CCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH FRSDILCGPFYVGAGERHNANNAGRMAQSTGAGWKTVSTCQAVDDPQLVDIRAAEKKMH HHHHCEECCEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHCCCCCCEEEEEHHHHCCC >Mature Secondary Structure MKPLSPNMKRTLAGACIGAAGFLAQHAAFAQSCGLANGKPATGAPIPIGAIVGKTGPDDF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEECCCCCCCC SSSTRAAAAYFKCVNANGGINGRPVQYLVEDDQWNPETASQVASKLVRDRKVLALAGNAS CCHHHHHEEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCEEEEEECCCC FVECGANAKFYEQENVIAIAGVGVPRECYFARNYVPLNMGPRLSMTQAALYAKQQYKATR EEEECCCCEEEECCCEEEEEECCCCHHHHEECCEEEECCCCCCCHHHHHHHHHHHCCCEE MVCIAPNIPSLGAWSCEGPVLWGKRNGVSVDTIVMDPDSADPTSVVLQAASKNPQAILLG EEEECCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCEEEEE LPKGLMVPILSAAEQQNLGRRIHFVSAASGYDLGVPKAIGPYWKGNFDVNLEFQPLDAPT CCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCC PDNQNWLAVMNKYGEKKDPRDTFSQAGYLAARLVTDTLLKLPANQLDRAHVTAALREVKD CCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH FRSDILCGPFYVGAGERHNANNAGRMAQSTGAGWKTVSTCQAVDDPQLVDIRAAEKKMH HHHHCEECCEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHCCCCCCEEEEEHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA