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The map label for this gene is ywnA [H]

Identifier: 83719348

GI number: 83719348

Start: 3289064

End: 3289528

Strand: Reverse

Name: ywnA [H]

Synonym: BTH_I2862

Alternate gene names: 83719348

Gene position: 3289528-3289064 (Counterclockwise)

Preceding gene: 83719886

Following gene: 83720179

Centisome position: 86.36

GC content: 70.54

Gene sequence:

>465_bases
ATGAATACGAGCAGTCGGTTCGCATTTGCCGTTCATGTGCTCGCGCTGTTGTCGTTGCAGGAAGGCGTGCCGCTGTCGTC
GGACATGATCGCGGGCAGCGTGAACACGAATCCGGCGCTGATTCGCCGCCTGCTGTCGATGCTGGCGGCGGCGGGTCTCA
CGACGTCGCAGCTCGGCGCGGGCGGCGGCGCGCTGCTGGCGCGCGAGCCGTCGCGCATCACGCTGCTCGACGTCTATCGT
GCGGTCGACGATGCGCAACTGTTCGCGCTGCACCGCGAGGCGCCCAATCCGGCGTGCCTTGTCGGGCGGCACATCCAGGG
CGTGCTGACCGACTACATCGGCGACGCGCAGCGGGCGATGGAGGCGTCGCTCGCAACGCGCACGCTCGCCGACGTGACGG
CCGACGTGCTGCGCTCGGAGGAGGCCTCCGGGCAGCCGGGCGGAGCGCGGCCGGCGAGCGGTTAG

Upstream 100 bases:

>100_bases
CCAGTCAATAAATTCGCTTGCCTTCCCGATGAAATGTAATTATGATGGTTACATATTGTCGTCGAGGCGGGGCGCGAATG
CATGCCGCCGCAGTTGAATC

Downstream 100 bases:

>100_bases
CGGATTCGGCCGCCGGCGCGCAGCCGTGCGTCCGCCGCGGGCGCGAGGGGCGCGAGGGGCGCGGGATAGGCCGCCGGCCT
GTGACGTTCGATGCGTGACG

Product: Rrf2 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MNTSSRFAFAVHVLALLSLQEGVPLSSDMIAGSVNTNPALIRRLLSMLAAAGLTTSQLGAGGGALLAREPSRITLLDVYR
AVDDAQLFALHREAPNPACLVGRHIQGVLTDYIGDAQRAMEASLATRTLADVTADVLRSEEASGQPGGARPASG

Sequences:

>Translated_154_residues
MNTSSRFAFAVHVLALLSLQEGVPLSSDMIAGSVNTNPALIRRLLSMLAAAGLTTSQLGAGGGALLAREPSRITLLDVYR
AVDDAQLFALHREAPNPACLVGRHIQGVLTDYIGDAQRAMEASLATRTLADVTADVLRSEEASGQPGGARPASG
>Mature_154_residues
MNTSSRFAFAVHVLALLSLQEGVPLSSDMIAGSVNTNPALIRRLLSMLAAAGLTTSQLGAGGGALLAREPSRITLLDVYR
AVDDAQLFALHREAPNPACLVGRHIQGVLTDYIGDAQRAMEASLATRTLADVTADVLRSEEASGQPGGARPASG

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 15964; Mature: 15964

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTSSRFAFAVHVLALLSLQEGVPLSSDMIAGSVNTNPALIRRLLSMLAAAGLTTSQLGA
CCCCHHHHHHHHHHHHHHHHCCCCCCCHHEECCCCCCHHHHHHHHHHHHHCCCCHHHCCC
GGGALLAREPSRITLLDVYRAVDDAQLFALHREAPNPACLVGRHIQGVLTDYIGDAQRAM
CCCEEEECCCCCCHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
EASLATRTLADVTADVLRSEEASGQPGGARPASG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MNTSSRFAFAVHVLALLSLQEGVPLSSDMIAGSVNTNPALIRRLLSMLAAAGLTTSQLGA
CCCCHHHHHHHHHHHHHHHHCCCCCCCHHEECCCCCCHHHHHHHHHHHHHCCCCHHHCCC
GGGALLAREPSRITLLDVYRAVDDAQLFALHREAPNPACLVGRHIQGVLTDYIGDAQRAM
CCCEEEECCCCCCHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
EASLATRTLADVTADVLRSEEASGQPGGARPASG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9150240; 9384377 [H]