| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83719338
Identifier: 83719338
GI number: 83719338
Start: 258379
End: 259515
Strand: Direct
Name: 83719338
Synonym: BTH_I0225
Alternate gene names: NA
Gene position: 258379-259515 (Clockwise)
Preceding gene: 83720790
Following gene: 83720152
Centisome position: 6.78
GC content: 73.26
Gene sequence:
>1137_bases GTGGCGGCGCGCGAAGCCGCGCGCCGCTCGCGCAACGGCGTCCGGCGCGCGGCGACGCACGCCGGACGGACTCCCCGGCG CTGGCGCGCGCGCGCGCTCGCCAGCGCCGTGCTCGCCGGCGCATGCGCGGCGGGCGGGCTCGCTTGGCCACCCGTCGGCG CGCTGGCGGCGGGCAGCGTCGCGACCGCGCCGCTGCCGCAGGCGCCGATTCCGGCGCCGAGCATGCAGTTGCCGGGCTTC CACGCGCCGCCGCCGTCGACGTCGAACGGCACCGTCGCGAGCGGCGCGGTGCGCACGCAGCCCGCACGGATGCCGTTCTA CGTCGCGACGAAGGGCAAGGTCACGATCTACGTGCTCGGCACGCTGCACGTGGGCGACCCCGCAGACTATCCGGCGAACC AGCCGTTTCGCCGGCCGATCCTCGCGGCGCTCGCCGTGTCGCCGACGCTCGCGCTCGAACTGTCGCCGGACGATCTGCTC GAATCGCAGGACGACGTGTCGAAGTACGGCGTGTGCAACTACGCGTGCCTGCCGCGCCTGTTGCCGCGGCCTCTCTGGCA GAAGCTCGCGAACCGGCTGCGCGGCAATCCGGCCGCGCTCGCCGGCATTCGCAACATGCGGCCGTGGCTCGCGTCGCTCG TCGTCGAGACGTACGATTCGCTGTCGGCCGGCTTGCAGACCGAATACGGCACCGAGGCGCAGCTGCAGAACGTGTTCCTG CGCAAGAAGGGCGGCAAGGTGGTCGGGCTCGAGACGCTCGCCGAGCAGATGCGCGCGTTCACGGGCCTCTCGCTCGCGCA GCAGCGCGAGATGCTCGCGCAGGACATGGTGCAGACGCCCGCGCAGAACGCGGCCGACGTGCGCACGCTGCATCGCCTCT GGCGCATCGGCGACGCGGACGCGATCGCCGCCTGGGCGAACGCGAAGACGGAGCGGCTCGCGCGCGCGCAGTCGATCGCC GAGTCGATCGACAACAAGATCGTCTACGAGCGCAACCGTCGCTTCGTCGCGCGGATGACGGCGATCGCCGCGCCGAACCG GCCGCTGTTCGTCGCGATCGGCGCGCTGCACCTGGGCGGCCCGAAGGGCGTGCTCGAACTGCTGCGGCAGCAGGGCTATC GCGTCGACGCGGGGTGA
Upstream 100 bases:
>100_bases GAGCGGTGCCGCGCCGAGGAGCCGAAGCTGCGCGACGTCGATGGCCGGCTCGTCGCCTGCCATCGCGCCGAGGAGGTGGG GGAGGCGAATGCCTGAGGCA
Downstream 100 bases:
>100_bases TCGGGAACCCGAACGAACCGGCGGGCGAATAGGGATAAACCCACATTTTGGCTGCGGCGCGCGGGCAAACGCTGTTCCGA CGATTGACACTCCAGGGGGC
Product: GumN family protein
Products: NA
Alternate protein names: GumN Protein; SLA2 Protein
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MAAREAARRSRNGVRRAATHAGRTPRRWRARALASAVLAGACAAGGLAWPPVGALAAGSVATAPLPQAPIPAPSMQLPGF HAPPPSTSNGTVASGAVRTQPARMPFYVATKGKVTIYVLGTLHVGDPADYPANQPFRRPILAALAVSPTLALELSPDDLL ESQDDVSKYGVCNYACLPRLLPRPLWQKLANRLRGNPAALAGIRNMRPWLASLVVETYDSLSAGLQTEYGTEAQLQNVFL RKKGGKVVGLETLAEQMRAFTGLSLAQQREMLAQDMVQTPAQNAADVRTLHRLWRIGDADAIAAWANAKTERLARAQSIA ESIDNKIVYERNRRFVARMTAIAAPNRPLFVAIGALHLGGPKGVLELLRQQGYRVDAG
Sequences:
>Translated_378_residues MAAREAARRSRNGVRRAATHAGRTPRRWRARALASAVLAGACAAGGLAWPPVGALAAGSVATAPLPQAPIPAPSMQLPGF HAPPPSTSNGTVASGAVRTQPARMPFYVATKGKVTIYVLGTLHVGDPADYPANQPFRRPILAALAVSPTLALELSPDDLL ESQDDVSKYGVCNYACLPRLLPRPLWQKLANRLRGNPAALAGIRNMRPWLASLVVETYDSLSAGLQTEYGTEAQLQNVFL RKKGGKVVGLETLAEQMRAFTGLSLAQQREMLAQDMVQTPAQNAADVRTLHRLWRIGDADAIAAWANAKTERLARAQSIA ESIDNKIVYERNRRFVARMTAIAAPNRPLFVAIGALHLGGPKGVLELLRQQGYRVDAG >Mature_377_residues AAREAARRSRNGVRRAATHAGRTPRRWRARALASAVLAGACAAGGLAWPPVGALAAGSVATAPLPQAPIPAPSMQLPGFH APPPSTSNGTVASGAVRTQPARMPFYVATKGKVTIYVLGTLHVGDPADYPANQPFRRPILAALAVSPTLALELSPDDLLE SQDDVSKYGVCNYACLPRLLPRPLWQKLANRLRGNPAALAGIRNMRPWLASLVVETYDSLSAGLQTEYGTEAQLQNVFLR KKGGKVVGLETLAEQMRAFTGLSLAQQREMLAQDMVQTPAQNAADVRTLHRLWRIGDADAIAAWANAKTERLARAQSIAE SIDNKIVYERNRRFVARMTAIAAPNRPLFVAIGALHLGGPKGVLELLRQQGYRVDAG
Specific function: Unknown
COG id: COG3735
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40516; Mature: 40385
Theoretical pI: Translated: 11.08; Mature: 11.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAREAARRSRNGVRRAATHAGRTPRRWRARALASAVLAGACAAGGLAWPPVGALAAGSV CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCC ATAPLPQAPIPAPSMQLPGFHAPPPSTSNGTVASGAVRTQPARMPFYVATKGKVTIYVLG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEECCCEEEEEEE TLHVGDPADYPANQPFRRPILAALAVSPTLALELSPDDLLESQDDVSKYGVCNYACLPRL EEECCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECHHHHHCCHHHHHHHCCCCHHHHHHH LPRPLWQKLANRLRGNPAALAGIRNMRPWLASLVVETYDSLSAGLQTEYGTEAQLQNVFL CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH RKKGGKVVGLETLAEQMRAFTGLSLAQQREMLAQDMVQTPAQNAADVRTLHRLWRIGDAD HHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHH AIAAWANAKTERLARAQSIAESIDNKIVYERNRRFVARMTAIAAPNRPLFVAIGALHLGG HHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHCHHHHHHHHHHCCCCCCEEEEEEEEECCC PKGVLELLRQQGYRVDAG HHHHHHHHHHCCCCCCCC >Mature Secondary Structure AAREAARRSRNGVRRAATHAGRTPRRWRARALASAVLAGACAAGGLAWPPVGALAAGSV CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCC ATAPLPQAPIPAPSMQLPGFHAPPPSTSNGTVASGAVRTQPARMPFYVATKGKVTIYVLG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEECCCEEEEEEE TLHVGDPADYPANQPFRRPILAALAVSPTLALELSPDDLLESQDDVSKYGVCNYACLPRL EEECCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECHHHHHCCHHHHHHHCCCCHHHHHHH LPRPLWQKLANRLRGNPAALAGIRNMRPWLASLVVETYDSLSAGLQTEYGTEAQLQNVFL CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH RKKGGKVVGLETLAEQMRAFTGLSLAQQREMLAQDMVQTPAQNAADVRTLHRLWRIGDAD HHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHH AIAAWANAKTERLARAQSIAESIDNKIVYERNRRFVARMTAIAAPNRPLFVAIGALHLGG HHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHCHHHHHHHHHHCCCCCCEEEEEEEEECCC PKGVLELLRQQGYRVDAG HHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA