| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83719315
Identifier: 83719315
GI number: 83719315
Start: 80897
End: 82462
Strand: Direct
Name: 83719315
Synonym: BTH_I0075
Alternate gene names: NA
Gene position: 80897-82462 (Clockwise)
Preceding gene: 83720035
Following gene: 83720211
Centisome position: 2.12
GC content: 53.83
Gene sequence:
>1566_bases ATGTCATTCAACAGCGCAGGTGCACCAAGCGTAGCCAGCTCCCTGGCAGGACGGGCAGCTGAGTACGTCCGCATGTCCAC GGAACACCAGCAGTATTCGACTGAGAATCAGCGCGACCGGATTCGAGACTACGCAACCCGTCGCGGATTCGACATCGTGC GCACATATGCCGATGAAGGGAAAAGCGGTCTTCGAATCGACGGTCGCCAAGCACTTCAGAATCTCATTTCCGATGTGACG AATGGAAAGGCTGATTTCTGCATCATCCTCGTCTATGACGTGAGTCGTTGGGGCAGATTCCAGGATGCCGACGAGAGCGC GTACTACGAATACATTTGCCGCCGTGCAGGAATTCAGGTTGCGTACTGCGCCGAGCAGTTCGAGAACGACGGGTCGCCAG TCTCGACCATTGTGAAGGGGGTGAAGCGCGCAATGGCCGGCGAGTACAGCCGAGAACTGTCTGCGAAGGTGTTTGCCGGC CAGTGTCGTTTGATTGAAATGGGTTTCCGACAAGGAGGCCCAGCAGGCTATGGGTTGCGCCGAGTATTGGTCGACGAGCA CGGTCTCATGAAAGCGGAGCTGCATCGAGGCGAACATAAAAGCCTACAGACGGACAGGGTTGTCCTGATGCCGGGGCCGG AAAGCGAGGTGCGAATCGTCAATTTAATCTATAACTGGTTTATCGACGAATCGCTCGACGAATACGAGATTGCAGCTCGC CTTAACGGCATGAATGTGCGCACTGACCTTGGCCGTGAGTGGACGCGGGCGACGGTACGGGAGGTATTGACCAACGAAAA ATACATTGGCAATAACGTATACAATCGGGTGTCATTCAAGCTGAAAAAGATGCGGGTGATGAACACCCCCGATATGTGGA TTCGAAAGGAGGGAGCATTTCAGGCAATTGTCCCGAGTGAGACGTTCTACACCGCTCAAGGCATTATGAGGGCGAGAGCG CGTCACTACTCGAACGAAGAGTTAATTGAGCGATTGCGTAATCTGTACCGCGCCCGCGGATTTCTGTCTGGCGTGGTAAT TGACGAAACAGATGGCATGCCTTCTACGTCCGTCTATGTTTATCGATTTGGCAGTTTAATTCGAGCCTATCAGACTGTCG GCTTCACTCCTGGTCGCGACTATCGTTACATAGAGACCAATCGCTTTTTGCGAAAACTGCATCCCGAAATCGTCGCCCAG ACGGAAAAGAAAATCGCGGATTTGGGCGGCACGATGATACGCGACACCGCAACCGACCTGCTGACGGTGAACGATGAGTT CACAGTATGCATTGTCCTCGCACGGTGTCAGGCGCATGGCAACGGCCGAAATCATTGGAAGGTGCGCTTCGATACGAGTC TTCTGCCGGACATCACTGTTGCGGTTCGGCTCGACCAGGCGAACGCATCGACACTCGACTACTACCTCTTACCACGTCTC GATTTTGGGCAACCCCGTATTCATCTCGCCGACCAAAATCCAATTGAGTTTGAGAGCTATCGATTTGACACGCTGGACTA CTTGTATGGAATGGCCGAGCGCGCTCGTCTCAGGAGAGTAGCGTGA
Upstream 100 bases:
>100_bases AGAGCGCCACGCCCCGATTTGAGGACGCGGCGTTCGCATTCGGGCTTCTCCCTGCGCATGGTGCCTGCTGCGTGTCTGTG TCTGAGTTGTGGAGCGGAGA
Downstream 100 bases:
>100_bases ACTCGCGACAGCAGCCCGGAGAAATTCGGATGATTCCGGTCTCTCAGATTGAGGTCATTAATCCGAGAGAGCGCAATGGT CGGGTATTCAATGAAATCGT
Product: recombinase
Products: NA
Alternate protein names: Resolvase Domain-Containing Protein; Resolvase Domain Protein; Site-Specific Recombinase; Resolvase Domain; Resolvase Family Site-Specific Recombinase; Resolvase; DNA Integration/Recombination Protein; LOW QUALITY PROTEIN Resolvase Domain Protein; Site-Specific Recombinases; Site-Specific DNA Recombinase; Site-Specific Recombinase Resolvase Family; DNA Recombinase; Recombinase-Like Protein; Resolvase Domain Protein PinR Type; Recombinase Protein
Number of amino acids: Translated: 521; Mature: 520
Protein sequence:
>521_residues MSFNSAGAPSVASSLAGRAAEYVRMSTEHQQYSTENQRDRIRDYATRRGFDIVRTYADEGKSGLRIDGRQALQNLISDVT NGKADFCIILVYDVSRWGRFQDADESAYYEYICRRAGIQVAYCAEQFENDGSPVSTIVKGVKRAMAGEYSRELSAKVFAG QCRLIEMGFRQGGPAGYGLRRVLVDEHGLMKAELHRGEHKSLQTDRVVLMPGPESEVRIVNLIYNWFIDESLDEYEIAAR LNGMNVRTDLGREWTRATVREVLTNEKYIGNNVYNRVSFKLKKMRVMNTPDMWIRKEGAFQAIVPSETFYTAQGIMRARA RHYSNEELIERLRNLYRARGFLSGVVIDETDGMPSTSVYVYRFGSLIRAYQTVGFTPGRDYRYIETNRFLRKLHPEIVAQ TEKKIADLGGTMIRDTATDLLTVNDEFTVCIVLARCQAHGNGRNHWKVRFDTSLLPDITVAVRLDQANASTLDYYLLPRL DFGQPRIHLADQNPIEFESYRFDTLDYLYGMAERARLRRVA
Sequences:
>Translated_521_residues MSFNSAGAPSVASSLAGRAAEYVRMSTEHQQYSTENQRDRIRDYATRRGFDIVRTYADEGKSGLRIDGRQALQNLISDVT NGKADFCIILVYDVSRWGRFQDADESAYYEYICRRAGIQVAYCAEQFENDGSPVSTIVKGVKRAMAGEYSRELSAKVFAG QCRLIEMGFRQGGPAGYGLRRVLVDEHGLMKAELHRGEHKSLQTDRVVLMPGPESEVRIVNLIYNWFIDESLDEYEIAAR LNGMNVRTDLGREWTRATVREVLTNEKYIGNNVYNRVSFKLKKMRVMNTPDMWIRKEGAFQAIVPSETFYTAQGIMRARA RHYSNEELIERLRNLYRARGFLSGVVIDETDGMPSTSVYVYRFGSLIRAYQTVGFTPGRDYRYIETNRFLRKLHPEIVAQ TEKKIADLGGTMIRDTATDLLTVNDEFTVCIVLARCQAHGNGRNHWKVRFDTSLLPDITVAVRLDQANASTLDYYLLPRL DFGQPRIHLADQNPIEFESYRFDTLDYLYGMAERARLRRVA >Mature_520_residues SFNSAGAPSVASSLAGRAAEYVRMSTEHQQYSTENQRDRIRDYATRRGFDIVRTYADEGKSGLRIDGRQALQNLISDVTN GKADFCIILVYDVSRWGRFQDADESAYYEYICRRAGIQVAYCAEQFENDGSPVSTIVKGVKRAMAGEYSRELSAKVFAGQ CRLIEMGFRQGGPAGYGLRRVLVDEHGLMKAELHRGEHKSLQTDRVVLMPGPESEVRIVNLIYNWFIDESLDEYEIAARL NGMNVRTDLGREWTRATVREVLTNEKYIGNNVYNRVSFKLKKMRVMNTPDMWIRKEGAFQAIVPSETFYTAQGIMRARAR HYSNEELIERLRNLYRARGFLSGVVIDETDGMPSTSVYVYRFGSLIRAYQTVGFTPGRDYRYIETNRFLRKLHPEIVAQT EKKIADLGGTMIRDTATDLLTVNDEFTVCIVLARCQAHGNGRNHWKVRFDTSLLPDITVAVRLDQANASTLDYYLLPRLD FGQPRIHLADQNPIEFESYRFDTLDYLYGMAERARLRRVA
Specific function: Unknown
COG id: COG1961
COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59639; Mature: 59508
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFNSAGAPSVASSLAGRAAEYVRMSTEHQQYSTENQRDRIRDYATRRGFDIVRTYADEG CCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCC KSGLRIDGRQALQNLISDVTNGKADFCIILVYDVSRWGRFQDADESAYYEYICRRAGIQV CCCCEECHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCEE AYCAEQFENDGSPVSTIVKGVKRAMAGEYSRELSAKVFAGQCRLIEMGFRQGGPAGYGLR EEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHH RVLVDEHGLMKAELHRGEHKSLQTDRVVLMPGPESEVRIVNLIYNWFIDESLDEYEIAAR EEECCCCCCHHHHHCCCCCCCCCCCEEEEECCCCCCCEEHHHHHHHHHCCCCCHHHHHHH LNGMNVRTDLGREWTRATVREVLTNEKYIGNNVYNRVSFKLKKMRVMNTPDMWIRKEGAF CCCCEECHHHCHHHHHHHHHHHHCCCCCCCCCHHHHHHHEEEHEEECCCCCCEEECCCCE QAIVPSETFYTAQGIMRARARHYSNEELIERLRNLYRARGFLSGVVIDETDGMPSTSVYV EEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHH YRFGSLIRAYQTVGFTPGRDYRYIETNRFLRKLHPEIVAQTEKKIADLGGTMIRDTATDL HHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHCCCCCE LTVNDEFTVCIVLARCQAHGNGRNHWKVRFDTSLLPDITVAVRLDQANASTLDYYLLPRL EEECCCCEEEEEEEHHHCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCEEEEEEECCC DFGQPRIHLADQNPIEFESYRFDTLDYLYGMAERARLRRVA CCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SFNSAGAPSVASSLAGRAAEYVRMSTEHQQYSTENQRDRIRDYATRRGFDIVRTYADEG CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCC KSGLRIDGRQALQNLISDVTNGKADFCIILVYDVSRWGRFQDADESAYYEYICRRAGIQV CCCCEECHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCEE AYCAEQFENDGSPVSTIVKGVKRAMAGEYSRELSAKVFAGQCRLIEMGFRQGGPAGYGLR EEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHH RVLVDEHGLMKAELHRGEHKSLQTDRVVLMPGPESEVRIVNLIYNWFIDESLDEYEIAAR EEECCCCCCHHHHHCCCCCCCCCCCEEEEECCCCCCCEEHHHHHHHHHCCCCCHHHHHHH LNGMNVRTDLGREWTRATVREVLTNEKYIGNNVYNRVSFKLKKMRVMNTPDMWIRKEGAF CCCCEECHHHCHHHHHHHHHHHHCCCCCCCCCHHHHHHHEEEHEEECCCCCCEEECCCCE QAIVPSETFYTAQGIMRARARHYSNEELIERLRNLYRARGFLSGVVIDETDGMPSTSVYV EEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHH YRFGSLIRAYQTVGFTPGRDYRYIETNRFLRKLHPEIVAQTEKKIADLGGTMIRDTATDL HHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHCCCCCE LTVNDEFTVCIVLARCQAHGNGRNHWKVRFDTSLLPDITVAVRLDQANASTLDYYLLPRL EEECCCCEEEEEEEHHHCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCEEEEEEECCC DFGQPRIHLADQNPIEFESYRFDTLDYLYGMAERARLRRVA CCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA