| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83719267
Identifier: 83719267
GI number: 83719267
Start: 2940768
End: 2941973
Strand: Reverse
Name: 83719267
Synonym: BTH_I2578
Alternate gene names: NA
Gene position: 2941973-2940768 (Counterclockwise)
Preceding gene: 83718584
Following gene: 83720493
Centisome position: 77.23
GC content: 65.09
Gene sequence:
>1206_bases ATGACTGATCTTCGTCTTACCAAGCGGTTCGCAGCACTGCTTGCAACCGGCGCGTTCGTTGCCGGCTGCAGTTCGCCGTC GCCTACGAAAATCGACTACAAGAGCGATTCGAAATCGAAGGAGGTGTCGCTCGCGGTGCCGCCCAACATGCTCGACGAGA CGCCGGATCAACGTTCGCTGCCGCCGCAGGGCGGCGCGACGTCGCTTTCCAGCCTGCAGCAGGTGCAGCAGGCCGCGCCG CCCACCGACTCGGTCGCGCCCACCGTGCCGGGCATGCGCATTCAGCGCGACGGCACCGAGAGCTGGCTCGTGATCGACGA CAAGTCGCCCGCGCAAATCTGGCCTCAGGTGCGCCGCTTCTGGCAGGAGCAGGGCTTCCTGCTCGTCGTCGAACAGCGCG ACAAGGGGGTGATGGAAACCGACTGGAACGAAACCCATCCGCAGATCAACGACGGACTGATTCGCGGTGTGATCTCGAAG GCTATGGGCAACTCGTACGTGACGGCGGAGCGCAACAAGTACCGCACGCGCCTCGACGCCGCGCCGAACGGCGGCACGTA CGTGTTCATCAGTCAGAAGGGGATGCGCGAGGCGCTGACGGGCGCGAACAACGATTCGAGCAAGTGGGAGCCGAAGCCGA ACGATCCCGGTCTCGAAACCGAATACCTGAAGCGCCTGATGGCCGTGATCGCGCAGAACGACGCGCGCGTGAAGGCGGGC GGCGTGTCGATCACCGACGATGCGGCGCCGTCGCGCGCGAAGGCGTCGACCAGCAAGAGCAAGGACGCGGCAGCGGCGAT CGCCGCGAAGAACGTCGCGAGCGCGTCGACGTCGAGCGCCCCGAGCGGAGCGGCCGTGCCGGACGTGCCGCCCGAAGTGA CGCTTGCCGAGCCGTACGATCGTTCGTGGCTGCATGTGGGCCTGGCGCTCGATCGCGCGAACTTCACGGTCGACGATCGC GATCGCACGAAGGGGCTGTACTACGTCCGCTACGTCGATCCGAAGGACTTGAGCGTCGAGGAGCAGGGCTTCTGGAGCCA GCTCTTCCACGGCAAGAAGGAAAAGAAGGCGAAGCAGTACCTCGTCAACGTGAAGGCTGTGACGGAGGGCGAGACGCGCG TCGCGGTTGTCGATGACAAGGGCAATGTCGACGCATCGGCGCCCGCACGGCAGATCATGTCGCTCCTCGTCAATCAGTTG CGCTGA
Upstream 100 bases:
>100_bases TGAGACAGTGCGCTTTTTGCACGGTCCGCCGCCGGACCGGTAAAATAGAAAGTTGACTCACGGAAAAGTCGCCGTGACCT AGTGGAAGGATTCCCAGAAC
Downstream 100 bases:
>100_bases GGTTGCCGCGCGCGGCACACCGCCGCCGAACTCAAGAAGCCCGCCTTTTGGCGGGCTTTTTTTCTGTGCCGATGCCGATG CGGGACCGAGCGCGTGCGCG
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MTDLRLTKRFAALLATGAFVAGCSSPSPTKIDYKSDSKSKEVSLAVPPNMLDETPDQRSLPPQGGATSLSSLQQVQQAAP PTDSVAPTVPGMRIQRDGTESWLVIDDKSPAQIWPQVRRFWQEQGFLLVVEQRDKGVMETDWNETHPQINDGLIRGVISK AMGNSYVTAERNKYRTRLDAAPNGGTYVFISQKGMREALTGANNDSSKWEPKPNDPGLETEYLKRLMAVIAQNDARVKAG GVSITDDAAPSRAKASTSKSKDAAAAIAAKNVASASTSSAPSGAAVPDVPPEVTLAEPYDRSWLHVGLALDRANFTVDDR DRTKGLYYVRYVDPKDLSVEEQGFWSQLFHGKKEKKAKQYLVNVKAVTEGETRVAVVDDKGNVDASAPARQIMSLLVNQL R
Sequences:
>Translated_401_residues MTDLRLTKRFAALLATGAFVAGCSSPSPTKIDYKSDSKSKEVSLAVPPNMLDETPDQRSLPPQGGATSLSSLQQVQQAAP PTDSVAPTVPGMRIQRDGTESWLVIDDKSPAQIWPQVRRFWQEQGFLLVVEQRDKGVMETDWNETHPQINDGLIRGVISK AMGNSYVTAERNKYRTRLDAAPNGGTYVFISQKGMREALTGANNDSSKWEPKPNDPGLETEYLKRLMAVIAQNDARVKAG GVSITDDAAPSRAKASTSKSKDAAAAIAAKNVASASTSSAPSGAAVPDVPPEVTLAEPYDRSWLHVGLALDRANFTVDDR DRTKGLYYVRYVDPKDLSVEEQGFWSQLFHGKKEKKAKQYLVNVKAVTEGETRVAVVDDKGNVDASAPARQIMSLLVNQL R >Mature_400_residues TDLRLTKRFAALLATGAFVAGCSSPSPTKIDYKSDSKSKEVSLAVPPNMLDETPDQRSLPPQGGATSLSSLQQVQQAAPP TDSVAPTVPGMRIQRDGTESWLVIDDKSPAQIWPQVRRFWQEQGFLLVVEQRDKGVMETDWNETHPQINDGLIRGVISKA MGNSYVTAERNKYRTRLDAAPNGGTYVFISQKGMREALTGANNDSSKWEPKPNDPGLETEYLKRLMAVIAQNDARVKAGG VSITDDAAPSRAKASTSKSKDAAAAIAAKNVASASTSSAPSGAAVPDVPPEVTLAEPYDRSWLHVGLALDRANFTVDDRD RTKGLYYVRYVDPKDLSVEEQGFWSQLFHGKKEKKAKQYLVNVKAVTEGETRVAVVDDKGNVDASAPARQIMSLLVNQLR
Specific function: Unknown
COG id: COG3317
COG function: function code M; Uncharacterized lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43631; Mature: 43500
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLRLTKRFAALLATGAFVAGCSSPSPTKIDYKSDSKSKEVSLAVPPNMLDETPDQRSL CCCHHHHHHHHHHHHHHHHEECCCCCCCCEEEECCCCCCCEEEEECCCHHHHCCCCCCCC PPQGGATSLSSLQQVQQAAPPTDSVAPTVPGMRIQRDGTESWLVIDDKSPAQIWPQVRRF CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHH WQEQGFLLVVEQRDKGVMETDWNETHPQINDGLIRGVISKAMGNSYVTAERNKYRTRLDA HHHCCCEEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHEECC APNGGTYVFISQKGMREALTGANNDSSKWEPKPNDPGLETEYLKRLMAVIAQNDARVKAG CCCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEC GVSITDDAAPSRAKASTSKSKDAAAAIAAKNVASASTSSAPSGAAVPDVPPEVTLAEPYD CEEECCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCC RSWLHVGLALDRANFTVDDRDRTKGLYYVRYVDPKDLSVEEQGFWSQLFHGKKEKKAKQY CCEEEEEEEEECCCCEECCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHH LVNVKAVTEGETRVAVVDDKGNVDASAPARQIMSLLVNQLR EEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure TDLRLTKRFAALLATGAFVAGCSSPSPTKIDYKSDSKSKEVSLAVPPNMLDETPDQRSL CCHHHHHHHHHHHHHHHHEECCCCCCCCEEEECCCCCCCEEEEECCCHHHHCCCCCCCC PPQGGATSLSSLQQVQQAAPPTDSVAPTVPGMRIQRDGTESWLVIDDKSPAQIWPQVRRF CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHH WQEQGFLLVVEQRDKGVMETDWNETHPQINDGLIRGVISKAMGNSYVTAERNKYRTRLDA HHHCCCEEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHEECC APNGGTYVFISQKGMREALTGANNDSSKWEPKPNDPGLETEYLKRLMAVIAQNDARVKAG CCCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEC GVSITDDAAPSRAKASTSKSKDAAAAIAAKNVASASTSSAPSGAAVPDVPPEVTLAEPYD CEEECCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCC RSWLHVGLALDRANFTVDDRDRTKGLYYVRYVDPKDLSVEEQGFWSQLFHGKKEKKAKQY CCEEEEEEEEECCCCEECCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHH LVNVKAVTEGETRVAVVDDKGNVDASAPARQIMSLLVNQLR EEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]