| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83719260
Identifier: 83719260
GI number: 83719260
Start: 3411848
End: 3412366
Strand: Reverse
Name: 83719260
Synonym: BTH_I2964
Alternate gene names: NA
Gene position: 3412366-3411848 (Counterclockwise)
Preceding gene: 83720413
Following gene: 83721364
Centisome position: 89.58
GC content: 62.62
Gene sequence:
>519_bases ATGGCGAAGAAAGAAAGCATTCAAAAGCGCTTGCAGAAAGTGCGGCCGCCCCGCGTCCAGCTCACGTACGAAGTCGAACG GGGCGACGCGATCGAGATCAAGGAATTGCCGTTCGTCGTCGGGGTCGTCGGCGATCTGGCGGGGCAGTCGGAAGTCGAGC AGCCGAAGCTGCGCGATCGCAAGTTCGTCAACATCGACCGCGACAACTTCGACGACGTGATGAAGGCGATCGAGCCGCGC GCCACGTTCCAGGTGGAGAACCGTCTGAGCGACGCGGGCGGCAAGTTCGCGGTCGATCTGAAGTTCCGATCGATCAACGA TTTCAATCCGGACGAGGTCGTCGGGCAGGTCGAGCCGTTGCGGCGCCTGCTCGAGGCGCGATCGAAGCTCGCTGACCTGC GCAACAAGCTGGCCGGCAACGACAAGCTCGAAGACCTGCTGAGCGAAGTGCTGTCGAACACGCAGCAGCTCGAAGCGCTG AAGAAGGGCGCGGACGGCGGCGACAAGCAGGGCGAATGA
Upstream 100 bases:
>100_bases GTCTGCAGCTCCGTCGGCGCCCGCGAAGGCGGCCGGCGGCGATCCGTTCAGCGCACTGCGTTAAGCCGCGCTCGATCCAC ACACCAACCGGGAGCCGTCG
Downstream 100 bases:
>100_bases GTAACGGGGTGGTGAAATGAACCAGCAAACGGCTGCGGCCCAATCGACCGGCGCTCAAGTCGGCACGGAGTCCTCGCTGC TCGACGAGATCGTCGAGAAG
Product: EvpA
Products: NA
Alternate protein names: Cytoplasmic Protein; T6ss S; Protein ImpB; Type VI Secretion Protein Family; Conserved Protein; Cytoplasmic Protein SciH; Type VI Secretion Protein VasQ; Type VI Secretion System Protein; Type VI Secretion; Type VI Secretion System Core Protein
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MAKKESIQKRLQKVRPPRVQLTYEVERGDAIEIKELPFVVGVVGDLAGQSEVEQPKLRDRKFVNIDRDNFDDVMKAIEPR ATFQVENRLSDAGGKFAVDLKFRSINDFNPDEVVGQVEPLRRLLEARSKLADLRNKLAGNDKLEDLLSEVLSNTQQLEAL KKGADGGDKQGE
Sequences:
>Translated_172_residues MAKKESIQKRLQKVRPPRVQLTYEVERGDAIEIKELPFVVGVVGDLAGQSEVEQPKLRDRKFVNIDRDNFDDVMKAIEPR ATFQVENRLSDAGGKFAVDLKFRSINDFNPDEVVGQVEPLRRLLEARSKLADLRNKLAGNDKLEDLLSEVLSNTQQLEAL KKGADGGDKQGE >Mature_171_residues AKKESIQKRLQKVRPPRVQLTYEVERGDAIEIKELPFVVGVVGDLAGQSEVEQPKLRDRKFVNIDRDNFDDVMKAIEPRA TFQVENRLSDAGGKFAVDLKFRSINDFNPDEVVGQVEPLRRLLEARSKLADLRNKLAGNDKLEDLLSEVLSNTQQLEALK KGADGGDKQGE
Specific function: Unknown
COG id: COG3516
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19358; Mature: 19227
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKESIQKRLQKVRPPRVQLTYEVERGDAIEIKELPFVVGVVGDLAGQSEVEQPKLRDR CCCHHHHHHHHHHCCCCCEEEEEEECCCCEEEHHHCCHHHHHHHHHCCCCCCCCCHHCCC KFVNIDRDNFDDVMKAIEPRATFQVENRLSDAGGKFAVDLKFRSINDFNPDEVVGQVEPL EEECCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHH RRLLEARSKLADLRNKLAGNDKLEDLLSEVLSNTQQLEALKKGADGGDKQGE HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure AKKESIQKRLQKVRPPRVQLTYEVERGDAIEIKELPFVVGVVGDLAGQSEVEQPKLRDR CCHHHHHHHHHHCCCCCEEEEEEECCCCEEEHHHCCHHHHHHHHHCCCCCCCCCHHCCC KFVNIDRDNFDDVMKAIEPRATFQVENRLSDAGGKFAVDLKFRSINDFNPDEVVGQVEPL EEECCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHH RRLLEARSKLADLRNKLAGNDKLEDLLSEVLSNTQQLEALKKGADGGDKQGE HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA