| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is yejA [C]
Identifier: 83719183
GI number: 83719183
Start: 2242670
End: 2244730
Strand: Direct
Name: yejA [C]
Synonym: BTH_I1978
Alternate gene names: 83719183
Gene position: 2242670-2244730 (Clockwise)
Preceding gene: 83719435
Following gene: 83720535
Centisome position: 58.88
GC content: 68.8
Gene sequence:
>2061_bases GTGTGGCGTCCGCGCCCGCATGGTCGGCAGGCGGCGGCTGGCTGTAACCGGTTGCGAATGGGTAGAATTCTCTCACATCG CCATCCTCGAACGACTGCCGACACCTCCATGACGATCGGTTCGCCCCGGGCCCGCCGGCCGCGACCGCCGCGACGCGCGG CGACATCACAACAGGCCGCGCAAGCCCCCGCGCCGCAACGGGCGGCCCGCGCGCGCGCCGCGCTCGCGCGCTTTGCACGC CGCACGGCGGCGCTCGTCGCGCTCGCGCTCGCCGCGGCGCCGGCGGCCCACGCCGTCTATGCGATCGCGCAGTACGGCGA GCCCAAGTATCCGCCCGGCTTCAAGCATTTCGACTACGTGAACCCGGACGCGCCGAAGGGCGGCACGCTCGTGCTCGCGA ACCCGAACCGGCTCACGACGTTCGACAAGTTCAATCCGTTCACGATGCGCGGCAATCCGGCGCCCGGGATCGACCTGCTG TTCGAGAGCCTGACGACGGGCAGCGCCGACGAACCCGCCTCCGCGTACGGGCTGCTCGCGGACGACATCGCCATCGCGCC CGACGGGCTGTCGGTCACGTTCCATTTGAACCCGCGCGCGCGCTTCTCGAACGGCGATCCCGTTACCGCAGCGGACGTCA AGCATTCGTTCGATACGCTGAAGAGCCCGCAGGCGGCGCCGCAATACCCGGCGTACTACGCGGACATCACGCGCGCGGTG ATCGTCAATCCGGAGACCGTGCGCTTCGAGTTTCGCCGCAAGAACCGGGAGCTGCCGCTGATCGCGGGCGGCATCCCGGT GTTCTCGAGCAAATGGGGCCTGCGGCCGGACGGTTCGCGCATCCCGTTCGACCAGCTCGCGTTCGAGCAGCCGATCGGCA GCGGCCCGTACCTGATCGAGCGCTACGACACCGGCCGCACGATTACCTACCGGCGCAATCCCGCCTACTGGGGCGTGTCG CTGCCCGTGCGGATCGGCACGAACAACTTCGAGCGCATCGTCTACAAGCTGTACGGCGACGGCGTCGCGCGGCTCGAGGC GTTCAAGGCGGGCGAATACGACGTGCTCGTCGAGTACATCGCGCGCAACTGGGTTCGGCGCGATGTCGGCAAGCGCTTCG ACAGCGGCGAGCTCGTCAAGCGCGAGTTCCGCCAGCACAACGGCGCGGGCATGCAGGGCTTCTTCATGAATCTGCGGCGG CCGTTGTTCCAGGACGTGCGCGTGCGCCACGCGCTCGATCTCGCGTTCGATTTCGAGTGGCTGAACCGGCAACTCTTCTA TGGCGCCTACACGCGTCTGAACAGCTACTTCGCCGATACCGACCTGCAGGCGACGGGCATGCCGGGCGCGGGCGAGCTCG CGCTGCTCAATCCGTTGCGCGCGCAGCTCGACGCGGCCGTGTTCGGGCCGATGACCGTGCAGCCGAGCACCGATCCGCCC GCGTCGCTGCGCGCGAACCTGCTGAAGGCGCGCGCGCTGCTCGCCGATGCCGGCTGGACCTACCGCGACGGCGCGCTGCG CAACGCGAAGGGCGAGCCGTTCGTGTTCGAGATCCTCGACGATTCGGGCTCGGCGTTCGAGGCGGTCGCCGCCGCGTACA TCCGCAATCTCGCGAAGCTCGGGATCGTCGCGAAATACCGGACGGCCGATTTCGCGCTGCTGCAAAAGCGTCTCGACGCG TTCGACTACGACGTGACGACGGTTCGCTACCCGGGCGTCCAGGTGCCGGGCGCCGAGCAGGTCGCGCGCTTCGCGAGCCG CTACGCGGACGAGCAGGGCTCGGACAACCTGATCGGGCTCAAGTCGCCCGCGGTCGATGCGATCCTGAAGGCGCTCACGC AGGCCGAGACGCGTCAGGAACTGCTCGACGCGACGCACGCGCTCGACCGCGTGCTGATGCACGGCTACTATGCGGTGCCG CAGTGGTACAGCGCGACGCACCGGATCGCGTTCAAGCGCACGCTTGCCTATCCGTCGACGCTGCCGCTGTACTATTCGGC GGAAGGCTGGGTTGTGTCGACGTGGTGGGCGAAGCCCGAGCATGGCACCCCCGCGCGTTAG
Upstream 100 bases:
>100_bases GCTTGCACGCCTTGGCGATGCCGTAAGCGATCGAACGGTTCGACAAGAGGCCCGTCAGCAGAATGCGTTTACCATCGAGA AAGCCCATGAATTCTCCTAT
Downstream 100 bases:
>100_bases CCCGGCCGCGCGGATCGCGCACGCCTTGAAGTGCGGCGCGAAGTGCGAAGCGACGAGCGGCCGTCCTGCGCCGCGCCGAT TGACGAAACCGTTCGAACAC
Product: ABC transporter periplasmic substrate-binding protein
Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 686; Mature: 686
Protein sequence:
>686_residues MWRPRPHGRQAAAGCNRLRMGRILSHRHPRTTADTSMTIGSPRARRPRPPRRAATSQQAAQAPAPQRAARARAALARFAR RTAALVALALAAAPAAHAVYAIAQYGEPKYPPGFKHFDYVNPDAPKGGTLVLANPNRLTTFDKFNPFTMRGNPAPGIDLL FESLTTGSADEPASAYGLLADDIAIAPDGLSVTFHLNPRARFSNGDPVTAADVKHSFDTLKSPQAAPQYPAYYADITRAV IVNPETVRFEFRRKNRELPLIAGGIPVFSSKWGLRPDGSRIPFDQLAFEQPIGSGPYLIERYDTGRTITYRRNPAYWGVS LPVRIGTNNFERIVYKLYGDGVARLEAFKAGEYDVLVEYIARNWVRRDVGKRFDSGELVKREFRQHNGAGMQGFFMNLRR PLFQDVRVRHALDLAFDFEWLNRQLFYGAYTRLNSYFADTDLQATGMPGAGELALLNPLRAQLDAAVFGPMTVQPSTDPP ASLRANLLKARALLADAGWTYRDGALRNAKGEPFVFEILDDSGSAFEAVAAAYIRNLAKLGIVAKYRTADFALLQKRLDA FDYDVTTVRYPGVQVPGAEQVARFASRYADEQGSDNLIGLKSPAVDAILKALTQAETRQELLDATHALDRVLMHGYYAVP QWYSATHRIAFKRTLAYPSTLPLYYSAEGWVVSTWWAKPEHGTPAR
Sequences:
>Translated_686_residues MWRPRPHGRQAAAGCNRLRMGRILSHRHPRTTADTSMTIGSPRARRPRPPRRAATSQQAAQAPAPQRAARARAALARFAR RTAALVALALAAAPAAHAVYAIAQYGEPKYPPGFKHFDYVNPDAPKGGTLVLANPNRLTTFDKFNPFTMRGNPAPGIDLL FESLTTGSADEPASAYGLLADDIAIAPDGLSVTFHLNPRARFSNGDPVTAADVKHSFDTLKSPQAAPQYPAYYADITRAV IVNPETVRFEFRRKNRELPLIAGGIPVFSSKWGLRPDGSRIPFDQLAFEQPIGSGPYLIERYDTGRTITYRRNPAYWGVS LPVRIGTNNFERIVYKLYGDGVARLEAFKAGEYDVLVEYIARNWVRRDVGKRFDSGELVKREFRQHNGAGMQGFFMNLRR PLFQDVRVRHALDLAFDFEWLNRQLFYGAYTRLNSYFADTDLQATGMPGAGELALLNPLRAQLDAAVFGPMTVQPSTDPP ASLRANLLKARALLADAGWTYRDGALRNAKGEPFVFEILDDSGSAFEAVAAAYIRNLAKLGIVAKYRTADFALLQKRLDA FDYDVTTVRYPGVQVPGAEQVARFASRYADEQGSDNLIGLKSPAVDAILKALTQAETRQELLDATHALDRVLMHGYYAVP QWYSATHRIAFKRTLAYPSTLPLYYSAEGWVVSTWWAKPEHGTPAR >Mature_686_residues MWRPRPHGRQAAAGCNRLRMGRILSHRHPRTTADTSMTIGSPRARRPRPPRRAATSQQAAQAPAPQRAARARAALARFAR RTAALVALALAAAPAAHAVYAIAQYGEPKYPPGFKHFDYVNPDAPKGGTLVLANPNRLTTFDKFNPFTMRGNPAPGIDLL FESLTTGSADEPASAYGLLADDIAIAPDGLSVTFHLNPRARFSNGDPVTAADVKHSFDTLKSPQAAPQYPAYYADITRAV IVNPETVRFEFRRKNRELPLIAGGIPVFSSKWGLRPDGSRIPFDQLAFEQPIGSGPYLIERYDTGRTITYRRNPAYWGVS LPVRIGTNNFERIVYKLYGDGVARLEAFKAGEYDVLVEYIARNWVRRDVGKRFDSGELVKREFRQHNGAGMQGFFMNLRR PLFQDVRVRHALDLAFDFEWLNRQLFYGAYTRLNSYFADTDLQATGMPGAGELALLNPLRAQLDAAVFGPMTVQPSTDPP ASLRANLLKARALLADAGWTYRDGALRNAKGEPFVFEILDDSGSAFEAVAAAYIRNLAKLGIVAKYRTADFALLQKRLDA FDYDVTTVRYPGVQVPGAEQVARFASRYADEQGSDNLIGLKSPAVDAILKALTQAETRQELLDATHALDRVLMHGYYAVP QWYSATHRIAFKRTLAYPSTLPLYYSAEGWVVSTWWAKPEHGTPAR
Specific function: Possible binding-protein with either a transport or enzymatic activity [H]
COG id: COG4166
COG function: function code E; ABC-type oligopeptide transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI87082063, Length=586, Percent_Identity=37.3720136518771, Blast_Score=361, Evalue=1e-100,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 76107; Mature: 76107
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: PS01310 FXYD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWRPRPHGRQAAAGCNRLRMGRILSHRHPRTTADTSMTIGSPRARRPRPPRRAATSQQAA CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHH QAPAPQRAARARAALARFARRTAALVALALAAAPAAHAVYAIAQYGEPKYPPGFKHFDYV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCC NPDAPKGGTLVLANPNRLTTFDKFNPFTMRGNPAPGIDLLFESLTTGSADEPASAYGLLA CCCCCCCCEEEEECCCCCCEECCCCCEEECCCCCCCHHHHHHHHCCCCCCCCCHHHCEEE DDIAIAPDGLSVTFHLNPRARFSNGDPVTAADVKHSFDTLKSPQAAPQYPAYYADITRAV CCEEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCEEE IVNPETVRFEFRRKNRELPLIAGGIPVFSSKWGLRPDGSRIPFDQLAFEQPIGSGPYLIE EECCHHEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEE RYDTGRTITYRRNPAYWGVSLPVRIGTNNFERIVYKLYGDGVARLEAFKAGEYDVLVEYI EECCCCEEEEECCCCEEEEEEEEEECCCCHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHH ARNWVRRDVGKRFDSGELVKREFRQHNGAGMQGFFMNLRRPLFQDVRVRHALDLAFDFEW HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEHHH LNRQLFYGAYTRLNSYFADTDLQATGMPGAGELALLNPLRAQLDAAVFGPMTVQPSTDPP HHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEEHHHHHHHHHHHHCCCEEECCCCCCC ASLRANLLKARALLADAGWTYRDGALRNAKGEPFVFEILDDSGSAFEAVAAAYIRNLAKL HHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH GIVAKYRTADFALLQKRLDAFDYDVTTVRYPGVQVPGAEQVARFASRYADEQGSDNLIGL CCEEEECHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEC KSPAVDAILKALTQAETRQELLDATHALDRVLMHGYYAVPQWYSATHRIAFKRTLAYPST CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCCC LPLYYSAEGWVVSTWWAKPEHGTPAR CCEEECCCCCEEEEEECCCCCCCCCC >Mature Secondary Structure MWRPRPHGRQAAAGCNRLRMGRILSHRHPRTTADTSMTIGSPRARRPRPPRRAATSQQAA CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHH QAPAPQRAARARAALARFARRTAALVALALAAAPAAHAVYAIAQYGEPKYPPGFKHFDYV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCC NPDAPKGGTLVLANPNRLTTFDKFNPFTMRGNPAPGIDLLFESLTTGSADEPASAYGLLA CCCCCCCCEEEEECCCCCCEECCCCCEEECCCCCCCHHHHHHHHCCCCCCCCCHHHCEEE DDIAIAPDGLSVTFHLNPRARFSNGDPVTAADVKHSFDTLKSPQAAPQYPAYYADITRAV CCEEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCEEE IVNPETVRFEFRRKNRELPLIAGGIPVFSSKWGLRPDGSRIPFDQLAFEQPIGSGPYLIE EECCHHEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEE RYDTGRTITYRRNPAYWGVSLPVRIGTNNFERIVYKLYGDGVARLEAFKAGEYDVLVEYI EECCCCEEEEECCCCEEEEEEEEEECCCCHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHH ARNWVRRDVGKRFDSGELVKREFRQHNGAGMQGFFMNLRRPLFQDVRVRHALDLAFDFEW HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEHHH LNRQLFYGAYTRLNSYFADTDLQATGMPGAGELALLNPLRAQLDAAVFGPMTVQPSTDPP HHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEEHHHHHHHHHHHHCCCEEECCCCCCC ASLRANLLKARALLADAGWTYRDGALRNAKGEPFVFEILDDSGSAFEAVAAAYIRNLAKL HHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH GIVAKYRTADFALLQKRLDAFDYDVTTVRYPGVQVPGAEQVARFASRYADEQGSDNLIGL CCEEEECHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEC KSPAVDAILKALTQAETRQELLDATHALDRVLMHGYYAVPQWYSATHRIAFKRTLAYPST CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCCC LPLYYSAEGWVVSTWWAKPEHGTPAR CCEEECCCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; oligopeptides [Periplasm]; H2O [C]
Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]