| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
Click here to switch to the map view.
The map label for this gene is ygaZ [C]
Identifier: 83719182
GI number: 83719182
Start: 351799
End: 352527
Strand: Direct
Name: ygaZ [C]
Synonym: BTH_I0320
Alternate gene names: 83719182
Gene position: 351799-352527 (Clockwise)
Preceding gene: 83719026
Following gene: 83719720
Centisome position: 9.24
GC content: 68.59
Gene sequence:
>729_bases ATGAACAGTCTGTCAACATCAACCGTCATTGCCGAGGAATCCACGGCAAGATCCGAAGCCCGGCGGGGCCTGCGCGCATC GCTGCCCGTGATGCTCGGCTTCGTTCCGTTCGCGCTCGTGCTGGGCGCGCAGGCGACGCAAAAGGGCTTGAGCATCGCCG AAGTGCCGCTTCTGACCGGCCTGAATTTCGGCGGCGGTTCCGAATTCACGGCGATCCGGCTATGGACGTCGCCGCCGCAC ATCCTGCTCATCGTCGCGATGTCGTTCCTCGTGAACTGCCGGCACATCCTGATGGGCGCGGCGTTCGCGCCGTATCTGCG GCATCTGTCGCGCAAGCAGACCTTTCCCGCGCTGTTCTTCATGTGCGACGAAAGCTGGGCGATGGCGCTCGCCGACGCGC GGCGCGAGGGGCGCGGCCGCGTGAGCCTGCCGTACTACCTCGGCGTGTCGGCGGGACTCTATCTGACGTGGATCTCGTGC ACCGCGCTCGGCGCGGCGCTGGGGCCGACGATCGGCGACGTCGAGCAATACGGCTTCGACATGGCGTTCACCGCGGTATT CCTCGTGCTGCTGCGCGGCATGTGGAAAGGCGCGCGCGCGAGCCGCCCGTGGCTCGTCAGCCTCGTCGTCGCGGCGGCGA CCTATCTGCTCGTGCCGGGCGCGTGGTACGTCGCGGCGGGCGCGCTCGCGGGCCTCGTCGCGGCCGTCGCCTGCGGAGAG CCGGCATGA
Upstream 100 bases:
>100_bases GAGAAATAGGTTGTTCGTGCCAATTCAACATCGGCATATGGCAACAACGCAACCCGATTTCATCGATTTTGGCAGACAAT ATTGCCTCGAAGGAGGTTTA
Downstream 100 bases:
>100_bases CCGATGTCTCGACGCTGCTGACGATCGTGCTGATGGCATCGTCCACGTACCTGAGCCGGATTCTCGGGTACGTCGTGCTG CGCAATCGCACGCTGAGCCC
Product: branched chain amino acid ABC transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MNSLSTSTVIAEESTARSEARRGLRASLPVMLGFVPFALVLGAQATQKGLSIAEVPLLTGLNFGGGSEFTAIRLWTSPPH ILLIVAMSFLVNCRHILMGAAFAPYLRHLSRKQTFPALFFMCDESWAMALADARREGRGRVSLPYYLGVSAGLYLTWISC TALGAALGPTIGDVEQYGFDMAFTAVFLVLLRGMWKGARASRPWLVSLVVAAATYLLVPGAWYVAAGALAGLVAAVACGE PA
Sequences:
>Translated_242_residues MNSLSTSTVIAEESTARSEARRGLRASLPVMLGFVPFALVLGAQATQKGLSIAEVPLLTGLNFGGGSEFTAIRLWTSPPH ILLIVAMSFLVNCRHILMGAAFAPYLRHLSRKQTFPALFFMCDESWAMALADARREGRGRVSLPYYLGVSAGLYLTWISC TALGAALGPTIGDVEQYGFDMAFTAVFLVLLRGMWKGARASRPWLVSLVVAAATYLLVPGAWYVAAGALAGLVAAVACGE PA >Mature_242_residues MNSLSTSTVIAEESTARSEARRGLRASLPVMLGFVPFALVLGAQATQKGLSIAEVPLLTGLNFGGGSEFTAIRLWTSPPH ILLIVAMSFLVNCRHILMGAAFAPYLRHLSRKQTFPALFFMCDESWAMALADARREGRGRVSLPYYLGVSAGLYLTWISC TALGAALGPTIGDVEQYGFDMAFTAVFLVLLRGMWKGARASRPWLVSLVVAAATYLLVPGAWYVAAGALAGLVAAVACGE PA
Specific function: Unknown
COG id: COG1296
COG function: function code E; Predicted branched-chain amino acid permease (azaleucine resistance)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AzlC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011606 [H]
Pfam domain/function: PF03591 AzlC [H]
EC number: NA
Molecular weight: Translated: 25731; Mature: 25731
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSLSTSTVIAEESTARSEARRGLRASLPVMLGFVPFALVLGAQATQKGLSIAEVPLLTG CCCCCCCEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHC LNFGGGSEFTAIRLWTSPPHILLIVAMSFLVNCRHILMGAAFAPYLRHLSRKQTFPALFF CCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE MCDESWAMALADARREGRGRVSLPYYLGVSAGLYLTWISCTALGAALGPTIGDVEQYGFD EECCHHHHHHHHHHHCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCH MAFTAVFLVLLRGMWKGARASRPWLVSLVVAAATYLLVPGAWYVAAGALAGLVAAVACGE HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC PA CC >Mature Secondary Structure MNSLSTSTVIAEESTARSEARRGLRASLPVMLGFVPFALVLGAQATQKGLSIAEVPLLTG CCCCCCCEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHC LNFGGGSEFTAIRLWTSPPHILLIVAMSFLVNCRHILMGAAFAPYLRHLSRKQTFPALFF CCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE MCDESWAMALADARREGRGRVSLPYYLGVSAGLYLTWISCTALGAALGPTIGDVEQYGFD EECCHHHHHHHHHHHCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCH MAFTAVFLVLLRGMWKGARASRPWLVSLVVAAATYLLVPGAWYVAAGALAGLVAAVACGE HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC PA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]