Definition Burkholderia thailandensis E264 chromosome chromosome I, complete sequence.
Accession NC_007651
Length 3,809,201

Click here to switch to the map view.

The map label for this gene is yigA [C]

Identifier: 83719150

GI number: 83719150

Start: 202015

End: 202767

Strand: Reverse

Name: yigA [C]

Synonym: BTH_I0171

Alternate gene names: 83719150

Gene position: 202767-202015 (Counterclockwise)

Preceding gene: 83719190

Following gene: 83720176

Centisome position: 5.32

GC content: 69.85

Gene sequence:

>753_bases
TTGCAGCCTGACCTTTCATTTGCCGAAGCCGAACGAAGCGCCATGAACGATCGCGAAGTCGCCGACTACCTGCTCGCCAA
CCCCGAATTCTTCGCCCAGCACGCGGAGCTGCTCGCGACGATCAAGCTCGCGAATCCGCATGGCAAGGCCGCTGTGTCGC
TTCAGGAGCGGCAGATGGAGATGTTGCGCGACAAGAACAAGCATCTCGAACGCCGGCTCGCCGAGCTGCTGCGCTACGGC
CACGAGAACGACGGGCTCGCCGCGAAGTTCAACCGCTGGACCGCGCGCGTGATCGCCGAGCGCGATCCGTACGCGCTGCC
GCGTGCGATCGCGGGCGGCCTCGCCGACGCGTTCGACGTCCCGCAGACTGCGCTCAGGCTCTGGGACGTCGCCGAAACCT
ACGCGCAAGCCGATTTCGCGCGCAACGTCGGCGAGGAGGTGCGCCTCTTCACGAACAGCCTTGCGACCCCATATTGCGGC
GCGAACACCGGATTCGAGGCGGCGCAGTGGCTCGCGCCCGTCACGGCCGCGACGGCCGGCGACGGCGAGGCACCGGCGGC
AAGCGGCGCCGCCGAATCGGTCGCGCTGATCGCGCTGCGCGCCCCCGACGCGGGCGAAGGCGCGGGCGCGTTCGGCCTGC
TGGTGCTGGGCTCGCCGGACCCGCGACGCTTCCACGACGGCATGGGCACCGACTTCCTCACGCAGATCGGCACGCTCGCG
AGCGCGGCGCTCACGCGCCTGCTGCCGCACTGA

Upstream 100 bases:

>100_bases
ATCTCGTGGGACGGCGCGCGCGACGAACGCGCGCCGCTCATGATGGCCGGCCCCGCGACGACCGTCTTCGAAGGCGTGAT
CGACCTGCCCGCCTGACCTT

Downstream 100 bases:

>100_bases
CGGCCGCGCGCCGATCGCCGCCCCGCGCCATGACCACCGATCCGATCGCCGACTACCTGTCGAATCTGCGGCACGTGAGG
AAGCTGTCGGATCACACGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MQPDLSFAEAERSAMNDREVADYLLANPEFFAQHAELLATIKLANPHGKAAVSLQERQMEMLRDKNKHLERRLAELLRYG
HENDGLAAKFNRWTARVIAERDPYALPRAIAGGLADAFDVPQTALRLWDVAETYAQADFARNVGEEVRLFTNSLATPYCG
ANTGFEAAQWLAPVTAATAGDGEAPAASGAAESVALIALRAPDAGEGAGAFGLLVLGSPDPRRFHDGMGTDFLTQIGTLA
SAALTRLLPH

Sequences:

>Translated_250_residues
MQPDLSFAEAERSAMNDREVADYLLANPEFFAQHAELLATIKLANPHGKAAVSLQERQMEMLRDKNKHLERRLAELLRYG
HENDGLAAKFNRWTARVIAERDPYALPRAIAGGLADAFDVPQTALRLWDVAETYAQADFARNVGEEVRLFTNSLATPYCG
ANTGFEAAQWLAPVTAATAGDGEAPAASGAAESVALIALRAPDAGEGAGAFGLLVLGSPDPRRFHDGMGTDFLTQIGTLA
SAALTRLLPH
>Mature_250_residues
MQPDLSFAEAERSAMNDREVADYLLANPEFFAQHAELLATIKLANPHGKAAVSLQERQMEMLRDKNKHLERRLAELLRYG
HENDGLAAKFNRWTARVIAERDPYALPRAIAGGLADAFDVPQTALRLWDVAETYAQADFARNVGEEVRLFTNSLATPYCG
ANTGFEAAQWLAPVTAATAGDGEAPAASGAAESVALIALRAPDAGEGAGAFGLLVLGSPDPRRFHDGMGTDFLTQIGTLA
SAALTRLLPH

Specific function: Unknown

COG id: COG3159

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26869; Mature: 26869

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPDLSFAEAERSAMNDREVADYLLANPEFFAQHAELLATIKLANPHGKAAVSLQERQME
CCCCCCHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHH
MLRDKNKHLERRLAELLRYGHENDGLAAKFNRWTARVIAERDPYALPRAIAGGLADAFDV
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
PQTALRLWDVAETYAQADFARNVGEEVRLFTNSLATPYCGANTGFEAAQWLAPVTAATAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCC
DGEAPAASGAAESVALIALRAPDAGEGAGAFGLLVLGSPDPRRFHDGMGTDFLTQIGTLA
CCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCHHHHCCCCHHHHHHHHHHH
SAALTRLLPH
HHHHHHHCCC
>Mature Secondary Structure
MQPDLSFAEAERSAMNDREVADYLLANPEFFAQHAELLATIKLANPHGKAAVSLQERQME
CCCCCCHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHH
MLRDKNKHLERRLAELLRYGHENDGLAAKFNRWTARVIAERDPYALPRAIAGGLADAFDV
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
PQTALRLWDVAETYAQADFARNVGEEVRLFTNSLATPYCGANTGFEAAQWLAPVTAATAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCC
DGEAPAASGAAESVALIALRAPDAGEGAGAFGLLVLGSPDPRRFHDGMGTDFLTQIGTLA
CCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCHHHHCCCCHHHHHHHHHHH
SAALTRLLPH
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA