| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is kdgK [H]
Identifier: 83719128
GI number: 83719128
Start: 2587592
End: 2588581
Strand: Direct
Name: kdgK [H]
Synonym: BTH_I2296
Alternate gene names: 83719128
Gene position: 2587592-2588581 (Clockwise)
Preceding gene: 83719100
Following gene: 83719833
Centisome position: 67.93
GC content: 71.92
Gene sequence:
>990_bases ATGCAAGTCCCGCTCGACGTCGTTACCTATGGCGAAGCAATGGCGATGTTCGTCGCCGCCGAACCCGGCCCGCTCGACTG CGCGACGCAATTCATGAAGCGCATCGCGGGCGCCGACCTGAACGTCGCGATCGGCCTGGCGCGCCTCGGTTTCCGGGTCG GCTGGGTGAGCCGCGTCGGCGCCGATTCGTTCGGCCGCTACGTGCTCGACACGCTCGCGCGCGAACGTGTCGACGCATCG TGCGTGACGGTCGACGCGCGCTATCCGACGGGCTTCCAGCTGAAGTCGCGCGCGACCGGCGGCGCGGACCCGGCCGTCGA GTATTTCCGCAAGGGCTCGGCCGCGAGCCGCCTGTCGCTCGACGACTACGCGCCCGATTACGTGCTCGGCGCGCGCCATC TGCACCTGACGGGCGTCGCGCCCGCGCTGTCCGATTCGTCGCGCGAGCTCGCGTTCCATCTCGCGCGCGAGATGCGCGCG GCGGGCAAGACGGTGTCGTTCGACCCGAACCTGCGGCCGACGCTGTGGCCGTCGCCGGAAGCGATGGCGCGCGCGCTGAA CGCGCTCGCCGAGCACGCGGACTGGGTGCTGCCCGGGCTCGGCGAAGGGCGGCAACTGACGGGCCTGGATACGCCCGCCG ACATCGCGCGCTTCTACCTCGGGCAGGGTGCGCGCGGCGTGATCGTCAAGCTCGGCGCGGCGGGCGCGTACTTTCGCACG GCCGACGGCCGCGAGGGCACGGTCGCGGCCGAGCGCGTCGAGCACGTCGTCGACACGGTCGGCGCGGGCGACGGCTTCGC GGTCGGCGCGGTGAGCGCGCTGCTCGAAGGCCGTGCGATCGACGACGCGGTGGCGCGCGGCAACCGGATCGGCGCGCTCG CGATCCAGGTGATCGGCGACTCGGAAGGACTGCCGACGCGCGCGGCACTCGATCGAATCGAAAATCTGAGCAATGCGCGC GATCGCCTAGAGGCGCCGCTCGCGCGATAA
Upstream 100 bases:
>100_bases TCGCGGCCGCATGAAACCCACCCGCCGGCGCCCGGCTCGGCTAAGCTCGACGCTTGCCGCCCCGACGCCCAGCCCTTGAT CGAAGGAGTCAGCCCACACC
Downstream 100 bases:
>100_bases ACCGCCTGTCCCGACGCAGGACGGGCACAATCGCGGCGAATCCCGCGTTTCATACGGCGCCGCTCGACACAGGAGACACA CATCATGTCCGCAACGCTTG
Product: 2-dehydro-3-deoxygluconokinase
Products: NA
Alternate protein names: 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase [H]
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MQVPLDVVTYGEAMAMFVAAEPGPLDCATQFMKRIAGADLNVAIGLARLGFRVGWVSRVGADSFGRYVLDTLARERVDAS CVTVDARYPTGFQLKSRATGGADPAVEYFRKGSAASRLSLDDYAPDYVLGARHLHLTGVAPALSDSSRELAFHLAREMRA AGKTVSFDPNLRPTLWPSPEAMARALNALAEHADWVLPGLGEGRQLTGLDTPADIARFYLGQGARGVIVKLGAAGAYFRT ADGREGTVAAERVEHVVDTVGAGDGFAVGAVSALLEGRAIDDAVARGNRIGALAIQVIGDSEGLPTRAALDRIENLSNAR DRLEAPLAR
Sequences:
>Translated_329_residues MQVPLDVVTYGEAMAMFVAAEPGPLDCATQFMKRIAGADLNVAIGLARLGFRVGWVSRVGADSFGRYVLDTLARERVDAS CVTVDARYPTGFQLKSRATGGADPAVEYFRKGSAASRLSLDDYAPDYVLGARHLHLTGVAPALSDSSRELAFHLAREMRA AGKTVSFDPNLRPTLWPSPEAMARALNALAEHADWVLPGLGEGRQLTGLDTPADIARFYLGQGARGVIVKLGAAGAYFRT ADGREGTVAAERVEHVVDTVGAGDGFAVGAVSALLEGRAIDDAVARGNRIGALAIQVIGDSEGLPTRAALDRIENLSNAR DRLEAPLAR >Mature_329_residues MQVPLDVVTYGEAMAMFVAAEPGPLDCATQFMKRIAGADLNVAIGLARLGFRVGWVSRVGADSFGRYVLDTLARERVDAS CVTVDARYPTGFQLKSRATGGADPAVEYFRKGSAASRLSLDDYAPDYVLGARHLHLTGVAPALSDSSRELAFHLAREMRA AGKTVSFDPNLRPTLWPSPEAMARALNALAEHADWVLPGLGEGRQLTGLDTPADIARFYLGQGARGVIVKLGAAGAYFRT ADGREGTVAAERVEHVVDTVGAGDGFAVGAVSALLEGRAIDDAVARGNRIGALAIQVIGDSEGLPTRAALDRIENLSNAR DRLEAPLAR
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Escherichia coli, GI87081971, Length=320, Percent_Identity=27.1875, Blast_Score=104, Evalue=9e-24, Organism=Escherichia coli, GI87082281, Length=283, Percent_Identity=31.095406360424, Blast_Score=102, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: =2.7.1.45 [H]
Molecular weight: Translated: 34772; Mature: 34772
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVPLDVVTYGEAMAMFVAAEPGPLDCATQFMKRIAGADLNVAIGLARLGFRVGWVSRVG CCCCCHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC ADSFGRYVLDTLARERVDASCVTVDARYPTGFQLKSRATGGADPAVEYFRKGSAASRLSL CHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEECCCCCCCCHHHHHHHCCCCCCCCCC DDYAPDYVLGARHLHLTGVAPALSDSSRELAFHLAREMRAAGKTVSFDPNLRPTLWPSPE CCCCCCCEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHH AMARALNALAEHADWVLPGLGEGRQLTGLDTPADIARFYLGQGARGVIVKLGAAGAYFRT HHHHHHHHHHHHCCEECCCCCCCCEECCCCCHHHHHHHHHCCCCCEEEEEECCCCCEEEC ADGREGTVAAERVEHVVDTVGAGDGFAVGAVSALLEGRAIDDAVARGNRIGALAIQVIGD CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCEEEEEEEEEEC SEGLPTRAALDRIENLSNARDRLEAPLAR CCCCCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MQVPLDVVTYGEAMAMFVAAEPGPLDCATQFMKRIAGADLNVAIGLARLGFRVGWVSRVG CCCCCHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC ADSFGRYVLDTLARERVDASCVTVDARYPTGFQLKSRATGGADPAVEYFRKGSAASRLSL CHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEECCCCCCCCHHHHHHHCCCCCCCCCC DDYAPDYVLGARHLHLTGVAPALSDSSRELAFHLAREMRAAGKTVSFDPNLRPTLWPSPE CCCCCCCEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHH AMARALNALAEHADWVLPGLGEGRQLTGLDTPADIARFYLGQGARGVIVKLGAAGAYFRT HHHHHHHHHHHHCCEECCCCCCCCEECCCCCHHHHHHHHHCCCCCEEEEEECCCCCEEEC ADGREGTVAAERVEHVVDTVGAGDGFAVGAVSALLEGRAIDDAVARGNRIGALAIQVIGD CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCEEEEEEEEEEC SEGLPTRAALDRIENLSNARDRLEAPLAR CCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8760912; 9384377 [H]