| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83719103
Identifier: 83719103
GI number: 83719103
Start: 602606
End: 603580
Strand: Reverse
Name: 83719103
Synonym: BTH_I0530
Alternate gene names: NA
Gene position: 603580-602606 (Counterclockwise)
Preceding gene: 83719849
Following gene: 83721107
Centisome position: 15.85
GC content: 66.05
Gene sequence:
>975_bases TTGAACGATATGACCCATCCTTCCGTGCGCGCGGCCGACGCGGCCCACGCGCCCCTCGATCGCGACGGCGTGAACAAGCT GCGCGACGAGCTCGTCGAAGCGGGGCTGTTGATTTCGACGGGCATCCAGGGCCTGTTCGGCCGCAGCGAGAAGTTCGAGC GCGTCGTCGACGCGCTCGACGCGTACATCACGCGCCTCGGCGCCGACCAGCACGCGGAAGTGCTGCGCTTTCCGCCGGCG ATGAGCCGCCCCGAATTCGAGCGCAGCGAATATCTGAAGAGCTTCCCGCAGCTCGCGGGCACCGTGCACAGCTTCTGCGG CAACGAGCACGATCATCAGCGCGTGCTGCAATGCCTCGATCGCGGCGACGACTGGACCGAGAGCCAGAAGCCCACCTACG TCGTGATGACGCCCGCCGCCTGCTATCCCGTCTATCCGGTTGTCGCGCAGCGCGGCGCGCTGCCCGTCGACGGACGGATC GTCGACGCATTCTCGTACTGCTTCCGGCACGAGCCGTCGCTCGACCCGACGCGCATGCAACTGTTCAGGATGCGCGAATA CATCCGCATCGGCACACCCGAGCAGATCCTCGCGTTCCGCCAGGACTGGATCGAGCGCGGCACCCGGATGATCGACGCGC TGCACTTGCCCAACAGCATCGACCTCGCGAACGATCCGTTCTTCGGCCGCGGCGGCAAGATCGTCGCGAGCAGCCAGCGC GACCAGAACCTGAAATTCGAGCTCCTGATTCCGATCGAATACGACGGCCGCCTGACCGCGTGCCTGAGCTTCAACTACCA CATGGACCACTTCGGCCTGCTGTGGGGCATCAAGACCGCGAATGCCGCGGTCGCGCACACGGGCTGCGTCGGCTTCGGCC TCGAACGCCTGACGCTCGGTCTCTTCAGGCATCACGGCCTCGATCCGGACACCTGGCCGCAGGCGGTACGCGACGTACTG TGGGGACATCGATGA
Upstream 100 bases:
>100_bases ACCTGCATTCGGCGCCGCTGATGATCAGCAACGATCGCATCGAGGCGAACACGGCCAACCTGCTGCTCGCGCTGCGCCCC GCCACGCTTGAGAGAGAGAT
Downstream 100 bases:
>100_bases GCAGCATCCTGCTCGACGCGCCGGCAAACGGCGCGTCGCTCGAAGAGATCTTCACCGACATCCGGCATCGCGCGCGGCAT TACCGGCCGCACGCGCTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Amino acid:[carrier-protein] ligase [AMP forming]; aa:CP ligase; Aminoacyl-[acyl-carrier-protein] synthetase; L-alanine:[acyl-carrier-protein] ligase; L-glycine:[acyl-carrier-protein] ligase; L-serine:[acyl-carrier-protein] ligase [H]
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MNDMTHPSVRAADAAHAPLDRDGVNKLRDELVEAGLLISTGIQGLFGRSEKFERVVDALDAYITRLGADQHAEVLRFPPA MSRPEFERSEYLKSFPQLAGTVHSFCGNEHDHQRVLQCLDRGDDWTESQKPTYVVMTPAACYPVYPVVAQRGALPVDGRI VDAFSYCFRHEPSLDPTRMQLFRMREYIRIGTPEQILAFRQDWIERGTRMIDALHLPNSIDLANDPFFGRGGKIVASSQR DQNLKFELLIPIEYDGRLTACLSFNYHMDHFGLLWGIKTANAAVAHTGCVGFGLERLTLGLFRHHGLDPDTWPQAVRDVL WGHR
Sequences:
>Translated_324_residues MNDMTHPSVRAADAAHAPLDRDGVNKLRDELVEAGLLISTGIQGLFGRSEKFERVVDALDAYITRLGADQHAEVLRFPPA MSRPEFERSEYLKSFPQLAGTVHSFCGNEHDHQRVLQCLDRGDDWTESQKPTYVVMTPAACYPVYPVVAQRGALPVDGRI VDAFSYCFRHEPSLDPTRMQLFRMREYIRIGTPEQILAFRQDWIERGTRMIDALHLPNSIDLANDPFFGRGGKIVASSQR DQNLKFELLIPIEYDGRLTACLSFNYHMDHFGLLWGIKTANAAVAHTGCVGFGLERLTLGLFRHHGLDPDTWPQAVRDVL WGHR >Mature_324_residues MNDMTHPSVRAADAAHAPLDRDGVNKLRDELVEAGLLISTGIQGLFGRSEKFERVVDALDAYITRLGADQHAEVLRFPPA MSRPEFERSEYLKSFPQLAGTVHSFCGNEHDHQRVLQCLDRGDDWTESQKPTYVVMTPAACYPVYPVVAQRGALPVDGRI VDAFSYCFRHEPSLDPTRMQLFRMREYIRIGTPEQILAFRQDWIERGTRMIDALHLPNSIDLANDPFFGRGGKIVASSQR DQNLKFELLIPIEYDGRLTACLSFNYHMDHFGLLWGIKTANAAVAHTGCVGFGLERLTLGLFRHHGLDPDTWPQAVRDVL WGHR
Specific function: Catalyzes the ATP-dependent activation of L-alanine, and to a lesser extent of L-glycine and L-serine, and their transfer to the phosphopantetheine prosthetic group covalently attached to the vicinal carrier protein Atu2571 of yet unknown function. May pa
COG id: COG0172
COG function: function code J; Seryl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family. Amino acid--[acyl-carrier-protein] ligase subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36657; Mature: 36657
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDMTHPSVRAADAAHAPLDRDGVNKLRDELVEAGLLISTGIQGLFGRSEKFERVVDALD CCCCCCCCCHHCCHHCCCCCHHHHHHHHHHHHHHCHHHHHCHHHHHCCHHHHHHHHHHHH AYITRLGADQHAEVLRFPPAMSRPEFERSEYLKSFPQLAGTVHSFCGNEHDHQRVLQCLD HHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH RGDDWTESQKPTYVVMTPAACYPVYPVVAQRGALPVDGRIVDAFSYCFRHEPSLDPTRMQ CCCCCCCCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHH LFRMREYIRIGTPEQILAFRQDWIERGTRMIDALHLPNSIDLANDPFFGRGGKIVASSQR HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCC DQNLKFELLIPIEYDGRLTACLSFNYHMDHFGLLWGIKTANAAVAHTGCVGFGLERLTLG CCCCEEEEEEEEECCCEEEEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH LFRHHGLDPDTWPQAVRDVLWGHR HHHHCCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure MNDMTHPSVRAADAAHAPLDRDGVNKLRDELVEAGLLISTGIQGLFGRSEKFERVVDALD CCCCCCCCCHHCCHHCCCCCHHHHHHHHHHHHHHCHHHHHCHHHHHCCHHHHHHHHHHHH AYITRLGADQHAEVLRFPPAMSRPEFERSEYLKSFPQLAGTVHSFCGNEHDHQRVLQCLD HHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH RGDDWTESQKPTYVVMTPAACYPVYPVVAQRGALPVDGRIVDAFSYCFRHEPSLDPTRMQ CCCCCCCCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHH LFRMREYIRIGTPEQILAFRQDWIERGTRMIDALHLPNSIDLANDPFFGRGGKIVASSQR HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCC DQNLKFELLIPIEYDGRLTACLSFNYHMDHFGLLWGIKTANAAVAHTGCVGFGLERLTLG CCCCEEEEEEEEECCCEEEEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH LFRHHGLDPDTWPQAVRDVLWGHR HHHHCCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]