| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83719099
Identifier: 83719099
GI number: 83719099
Start: 417827
End: 418756
Strand: Direct
Name: 83719099
Synonym: BTH_I0375
Alternate gene names: NA
Gene position: 417827-418756 (Clockwise)
Preceding gene: 83719297
Following gene: 83720907
Centisome position: 10.97
GC content: 69.14
Gene sequence:
>930_bases ATGGAAAACAAATCACACGCGTTCTGGGCCGGCCTTTTCACGATCGCGCTGCTCGCCGCGATCGTCGGCGCGGTCTACTG GTTCAACGTCGATCGCACGGTGCGCGTGCCGTACGATCTCGTATCGCGCTCGAACGTGACCGGGCTCTTTCCCGACGCAG CCGTCCGCTATCGCGGGCTCGATGTCGGCAAGGTGCAGTCGATCGACTTCGATCGCGGCCATCCGGGCCAGATCGTGATT CGCATCCTCGTCGACACGCATGCGCCGATCACGCGCTCGACGTTCGGCAGCCTGGGCTTCCAGGGCGTGACGGGCATCGC GTTCGTGCAGCTCGACGACACGGGCGCCGATCTCGCGCCGCTGCCGACGTCGGCGAAGGCCGTCGCGCAGATCCCGATGC GCCCGAGCCTGTTCGATCAGCTCCAGCAGCGCGGCGATGTGCTGCTCAAGCAGATGGAGATCGCCGCGAAGAGCGTGAAC GAGATGCTGTCGCCCGACATGCGCGATCAGTTGAAGGCGACCGCGGCGAGCATGCAGCACGCGGCCGACGGCGTCACCCA TCTGTCGAGGCAGGTCGAGCCCGCGCTCGCGCAGATGCCGCAGACGATGGAGCACGTGAACCACGCGCTCAGCGCGGCGA ACGCGCTCGTCGCGCCCGGCGGGCCGCTCGTCACGAACCTGAACCGCGCGGGGCAGGCGCTCGCGTCGATGAACGACACG CTCGCCGAGCTGAGCGCGCGCGTGCGTTACGACACGCTGCCGCGCTTCAACGCGCTCGCGACGAACGTCGGCGACGCGTC GCGCACGCTGAAGGATGTCGCGGGCGACGTCGGCCGCAATCCGCGCAGCCTGCTGTTCGGCGCGCCGGCAGCCGAGCCGG GCCCGGGCGAGACGGGATTCGCGTGGCCGAGCGCCGCACCCGCCCAATAA
Upstream 100 bases:
>100_bases GCGCTGCCGCCCGAGCGTCGCGCGCGCCTGCCGAAGGCCGCGCTCGAGCCGGCGCCTTCGGACGTCGAGTTGTAGTCAAG GAACACGAGGGAACCCCCGC
Downstream 100 bases:
>100_bases GTTTTTCTGGAATCCGCGATGCACGCACACTTCATGTCAGGTTCATTGTTCCGCCGCGGCCGCGCGGCGCTCGCGCTCGC CGTGGCGCTCGCGATCGCGA
Product: ABC transporter periplasmic substrate-binding protein
Products: NA
Alternate protein names: Mce Related Protein; Mammalian Cell Entry Related Domain-Containing Protein; ABC Transporter Permease; ABC-Type Transporter Periplasmic Component; ABC Membrane Transporter Periplasmic Protein; Mce Related Family; Mce Family Protein; MCE-Like Family Protein; ABC-Type Transport System Periplasmic Component LinM; ABC Transporter; Signal Peptide Protein; ABC-Type Transport System Protein; Periplasmic Protein; Virulence Factor Mce-Like Protein; Exported Protein
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MENKSHAFWAGLFTIALLAAIVGAVYWFNVDRTVRVPYDLVSRSNVTGLFPDAAVRYRGLDVGKVQSIDFDRGHPGQIVI RILVDTHAPITRSTFGSLGFQGVTGIAFVQLDDTGADLAPLPTSAKAVAQIPMRPSLFDQLQQRGDVLLKQMEIAAKSVN EMLSPDMRDQLKATAASMQHAADGVTHLSRQVEPALAQMPQTMEHVNHALSAANALVAPGGPLVTNLNRAGQALASMNDT LAELSARVRYDTLPRFNALATNVGDASRTLKDVAGDVGRNPRSLLFGAPAAEPGPGETGFAWPSAAPAQ
Sequences:
>Translated_309_residues MENKSHAFWAGLFTIALLAAIVGAVYWFNVDRTVRVPYDLVSRSNVTGLFPDAAVRYRGLDVGKVQSIDFDRGHPGQIVI RILVDTHAPITRSTFGSLGFQGVTGIAFVQLDDTGADLAPLPTSAKAVAQIPMRPSLFDQLQQRGDVLLKQMEIAAKSVN EMLSPDMRDQLKATAASMQHAADGVTHLSRQVEPALAQMPQTMEHVNHALSAANALVAPGGPLVTNLNRAGQALASMNDT LAELSARVRYDTLPRFNALATNVGDASRTLKDVAGDVGRNPRSLLFGAPAAEPGPGETGFAWPSAAPAQ >Mature_309_residues MENKSHAFWAGLFTIALLAAIVGAVYWFNVDRTVRVPYDLVSRSNVTGLFPDAAVRYRGLDVGKVQSIDFDRGHPGQIVI RILVDTHAPITRSTFGSLGFQGVTGIAFVQLDDTGADLAPLPTSAKAVAQIPMRPSLFDQLQQRGDVLLKQMEIAAKSVN EMLSPDMRDQLKATAASMQHAADGVTHLSRQVEPALAQMPQTMEHVNHALSAANALVAPGGPLVTNLNRAGQALASMNDT LAELSARVRYDTLPRFNALATNVGDASRTLKDVAGDVGRNPRSLLFGAPAAEPGPGETGFAWPSAAPAQ
Specific function: Unknown
COG id: COG1463
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32870; Mature: 32870
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENKSHAFWAGLFTIALLAAIVGAVYWFNVDRTVRVPYDLVSRSNVTGLFPDAAVRYRGL CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHCCCCCCCCCCCHHHHCCCC DVGKVQSIDFDRGHPGQIVIRILVDTHAPITRSTFGSLGFQGVTGIAFVQLDDTGADLAP CCCCEEECCCCCCCCCEEEEEEEECCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCC LPTSAKAVAQIPMRPSLFDQLQQRGDVLLKQMEIAAKSVNEMLSPDMRDQLKATAASMQH CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH AADGVTHLSRQVEPALAQMPQTMEHVNHALSAANALVAPGGPLVTNLNRAGQALASMNDT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHCHHHHHHHHHHHHHH LAELSARVRYDTLPRFNALATNVGDASRTLKDVAGDVGRNPRSLLFGAPAAEPGPGETGF HHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCC AWPSAAPAQ CCCCCCCCC >Mature Secondary Structure MENKSHAFWAGLFTIALLAAIVGAVYWFNVDRTVRVPYDLVSRSNVTGLFPDAAVRYRGL CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHCCCCCCCCCCCHHHHCCCC DVGKVQSIDFDRGHPGQIVIRILVDTHAPITRSTFGSLGFQGVTGIAFVQLDDTGADLAP CCCCEEECCCCCCCCCEEEEEEEECCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCC LPTSAKAVAQIPMRPSLFDQLQQRGDVLLKQMEIAAKSVNEMLSPDMRDQLKATAASMQH CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH AADGVTHLSRQVEPALAQMPQTMEHVNHALSAANALVAPGGPLVTNLNRAGQALASMNDT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHCHHHHHHHHHHHHHH LAELSARVRYDTLPRFNALATNVGDASRTLKDVAGDVGRNPRSLLFGAPAAEPGPGETGF HHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCC AWPSAAPAQ CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA