| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83719040
Identifier: 83719040
GI number: 83719040
Start: 2971621
End: 2973297
Strand: Direct
Name: 83719040
Synonym: BTH_I2610
Alternate gene names: NA
Gene position: 2971621-2973297 (Clockwise)
Preceding gene: 83719477
Following gene: 83720667
Centisome position: 78.01
GC content: 63.45
Gene sequence:
>1677_bases ATGGCCACGAAAGCGCCGCCGCTTCCGACACATGCATCAGGAATCCGAACGACCTGGCGGCGGGCCGCCGCGCAACCCGC CCTGCATCGATTTCACCGCCGGAATCTCAAATCGACCATTCAATTCATCAGGCCGAGTCAATTCATGATTAATGCGAAAG CAAGATTTTTATTTTTTATTTTCATGATGAGCCTGATCGGATACCGCCCGGCATTCGCGCAAACCAATACGCCGGTAACC GGCATCGTGCTAGGCGGAGAAATCATCGAGATCATCAAGCAGAACCCGCAAAATCCGACGCAAGCGATCAACAACTATAT GTCGGGCGTCGCCGCGATGAACGTGCGCTGGGTGCGCATCCATCTCGACTGGTCGGCCATCCAGCCTGCGTCGACGTGGA TCTTCGCGAGCGATCCCAATCCCGGCCAGAGCAGCGGCCTCACCTGGGGCGCGACGGACATCGTCGTTCGGGCGGCCAGG AATTACGGAATCCGCATTCTCGGCGTGATCACGTCGACACCGCGCTGGGCGGTCAATTCGCGGTGCCCGAGCGATTATCT GCAATCGACCGACGGCGCTTACACGCTGTGCGCGCCGAATCTCACGCCATATACGAACTTCGCGCGAGCGGCCGCCAAGC ATTACAGCAGCGACAGTTACGGCGGAAAAATCGACGCGTGGGAAATCTGGAACGAACCGAATTGCGGCCCGAACTTCATT CCTCACGATCCGCTCCTTTATACGCGACTCCTGAAGAGCGCGTATCCGGCGATCAAGCAGGCCAATCCGGCGGCGGCGGT CTATGCGGGCGGCAGCTCGGGGTGCCTCACGTCTCCGAACAACGGAACCGGCGCGCTTCCGTCGACCGGCGTGGCCGGCC TCGTGAGCTCGACGGACGCCCGCTACCCCGCGCCCACTCAATGGGAGCCGCGCGACTGGCTGGCCGTCATGTACGCGAAC GGCGCGCGCGGGTACTTCGACGGTCTCGCGCACCACCCCCACTGCCACAGCGACGACTGGCAACTGCCGGGCGACCAGTG CCCGAGCGCGACCGTCAACTCCGTGTACCCCGATTATTCGAATCCGTTCAACATCATGTGGCACACGTTCCCGTCGCCTT CGTACGGCTGGCCGTCCCCGACCGGCAAGACGTTCGCGAGCTACACGGGCACGAGCCTGCGCGACCTGATGAACGCGAAC GGCGACGGAACGAAGCCGATCGTGATCACCGAGTTCGGCGTCGCGACGACCGCGTCGGACGGCGCGACCGATTTCACCGG CCGGTTGGGCGGCGATGCGCAGCAATACACGGACGCCAATTTCCAGACGATCGCGCCCGCCTACCTGACGCAGGCGAATC AGGCGCGCGAGTACAAGGCGCTGATCGCCTGGATCGCCAATCAGCCTTACGGCCAATACGGCCCGGTTTACGCGTACTGC TACTCGGACATGGCGCTGTCGTCGCCGTATAGCGGGAACATCTACGAGCCGTACTTCGGCCTGGTGACGATCACCGCGTC GACGGGTTCGTCCGGCACGGTGGGCGCGCCCAAAATTGCCGGAACGTTCCAGGCCCCGTCGGGGCAGTATTACCCGGCCT GGCCCAACTTCGGCGCGGCCGCAGCAGCCGCCGCCAATCAGACGCCGGGCTATGCGCCGGTCGGCCCCGGCTGGTGA
Upstream 100 bases:
>100_bases GTGCGGACGCTTTCATGTTGCCCTGATCGAATCGGGATGATCGCGCGATTGCGCGCCGCACCTCGCTCGATCGACGTCGC ATCACGGCAGCCACACGAAA
Downstream 100 bases:
>100_bases CGCACATCGTCGGACGAAAGACGAGCGCGGCGCGCACGCGCGCCGCCGCCCGCCACCGCCCTTACGCGACCTTCGCCTGC AGCGCGCTTTCGATCGTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 558; Mature: 557
Protein sequence:
>558_residues MATKAPPLPTHASGIRTTWRRAAAQPALHRFHRRNLKSTIQFIRPSQFMINAKARFLFFIFMMSLIGYRPAFAQTNTPVT GIVLGGEIIEIIKQNPQNPTQAINNYMSGVAAMNVRWVRIHLDWSAIQPASTWIFASDPNPGQSSGLTWGATDIVVRAAR NYGIRILGVITSTPRWAVNSRCPSDYLQSTDGAYTLCAPNLTPYTNFARAAAKHYSSDSYGGKIDAWEIWNEPNCGPNFI PHDPLLYTRLLKSAYPAIKQANPAAAVYAGGSSGCLTSPNNGTGALPSTGVAGLVSSTDARYPAPTQWEPRDWLAVMYAN GARGYFDGLAHHPHCHSDDWQLPGDQCPSATVNSVYPDYSNPFNIMWHTFPSPSYGWPSPTGKTFASYTGTSLRDLMNAN GDGTKPIVITEFGVATTASDGATDFTGRLGGDAQQYTDANFQTIAPAYLTQANQAREYKALIAWIANQPYGQYGPVYAYC YSDMALSSPYSGNIYEPYFGLVTITASTGSSGTVGAPKIAGTFQAPSGQYYPAWPNFGAAAAAAANQTPGYAPVGPGW
Sequences:
>Translated_558_residues MATKAPPLPTHASGIRTTWRRAAAQPALHRFHRRNLKSTIQFIRPSQFMINAKARFLFFIFMMSLIGYRPAFAQTNTPVT GIVLGGEIIEIIKQNPQNPTQAINNYMSGVAAMNVRWVRIHLDWSAIQPASTWIFASDPNPGQSSGLTWGATDIVVRAAR NYGIRILGVITSTPRWAVNSRCPSDYLQSTDGAYTLCAPNLTPYTNFARAAAKHYSSDSYGGKIDAWEIWNEPNCGPNFI PHDPLLYTRLLKSAYPAIKQANPAAAVYAGGSSGCLTSPNNGTGALPSTGVAGLVSSTDARYPAPTQWEPRDWLAVMYAN GARGYFDGLAHHPHCHSDDWQLPGDQCPSATVNSVYPDYSNPFNIMWHTFPSPSYGWPSPTGKTFASYTGTSLRDLMNAN GDGTKPIVITEFGVATTASDGATDFTGRLGGDAQQYTDANFQTIAPAYLTQANQAREYKALIAWIANQPYGQYGPVYAYC YSDMALSSPYSGNIYEPYFGLVTITASTGSSGTVGAPKIAGTFQAPSGQYYPAWPNFGAAAAAAANQTPGYAPVGPGW >Mature_557_residues ATKAPPLPTHASGIRTTWRRAAAQPALHRFHRRNLKSTIQFIRPSQFMINAKARFLFFIFMMSLIGYRPAFAQTNTPVTG IVLGGEIIEIIKQNPQNPTQAINNYMSGVAAMNVRWVRIHLDWSAIQPASTWIFASDPNPGQSSGLTWGATDIVVRAARN YGIRILGVITSTPRWAVNSRCPSDYLQSTDGAYTLCAPNLTPYTNFARAAAKHYSSDSYGGKIDAWEIWNEPNCGPNFIP HDPLLYTRLLKSAYPAIKQANPAAAVYAGGSSGCLTSPNNGTGALPSTGVAGLVSSTDARYPAPTQWEPRDWLAVMYANG ARGYFDGLAHHPHCHSDDWQLPGDQCPSATVNSVYPDYSNPFNIMWHTFPSPSYGWPSPTGKTFASYTGTSLRDLMNANG DGTKPIVITEFGVATTASDGATDFTGRLGGDAQQYTDANFQTIAPAYLTQANQAREYKALIAWIANQPYGQYGPVYAYCY SDMALSSPYSGNIYEPYFGLVTITASTGSSGTVGAPKIAGTFQAPSGQYYPAWPNFGAAAAAAANQTPGYAPVGPGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60251; Mature: 60120
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATKAPPLPTHASGIRTTWRRAAAQPALHRFHRRNLKSTIQFIRPSQFMINAKARFLFFI CCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHH FMMSLIGYRPAFAQTNTPVTGIVLGGEIIEIIKQNPQNPTQAINNYMSGVAAMNVRWVRI HHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHCCCCCHHHHHHHHHHHHEEEEEEEEEE HLDWSAIQPASTWIFASDPNPGQSSGLTWGATDIVVRAARNYGIRILGVITSTPRWAVNS EEEHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCEEECC RCPSDYLQSTDGAYTLCAPNLTPYTNFARAAAKHYSSDSYGGKIDAWEIWNEPNCGPNFI CCCHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCC PHDPLLYTRLLKSAYPAIKQANPAAAVYAGGSSGCLTSPNNGTGALPSTGVAGLVSSTDA CCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCC RYPAPTQWEPRDWLAVMYANGARGYFDGLAHHPHCHSDDWQLPGDQCPSATVNSVYPDYS CCCCCCCCCCCCEEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCC NPFNIMWHTFPSPSYGWPSPTGKTFASYTGTSLRDLMNANGDGTKPIVITEFGVATTASD CCCEEEEEECCCCCCCCCCCCCCCHHHCCCHHHHHHHCCCCCCCCCEEEEECCCEECCCC GATDFTGRLGGDAQQYTDANFQTIAPAYLTQANQAREYKALIAWIANQPYGQYGPVYAYC CCCCCCCCCCCCHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE YSDMALSSPYSGNIYEPYFGLVTITASTGSSGTVGAPKIAGTFQAPSGQYYPAWPNFGAA ECCHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCH AAAAANQTPGYAPVGPGW HHHHCCCCCCCCCCCCCC >Mature Secondary Structure ATKAPPLPTHASGIRTTWRRAAAQPALHRFHRRNLKSTIQFIRPSQFMINAKARFLFFI CCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHH FMMSLIGYRPAFAQTNTPVTGIVLGGEIIEIIKQNPQNPTQAINNYMSGVAAMNVRWVRI HHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHCCCCCHHHHHHHHHHHHEEEEEEEEEE HLDWSAIQPASTWIFASDPNPGQSSGLTWGATDIVVRAARNYGIRILGVITSTPRWAVNS EEEHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCEEECC RCPSDYLQSTDGAYTLCAPNLTPYTNFARAAAKHYSSDSYGGKIDAWEIWNEPNCGPNFI CCCHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCC PHDPLLYTRLLKSAYPAIKQANPAAAVYAGGSSGCLTSPNNGTGALPSTGVAGLVSSTDA CCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCC RYPAPTQWEPRDWLAVMYANGARGYFDGLAHHPHCHSDDWQLPGDQCPSATVNSVYPDYS CCCCCCCCCCCCEEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCC NPFNIMWHTFPSPSYGWPSPTGKTFASYTGTSLRDLMNANGDGTKPIVITEFGVATTASD CCCEEEEEECCCCCCCCCCCCCCCHHHCCCHHHHHHHCCCCCCCCCEEEEECCCEECCCC GATDFTGRLGGDAQQYTDANFQTIAPAYLTQANQAREYKALIAWIANQPYGQYGPVYAYC CCCCCCCCCCCCHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE YSDMALSSPYSGNIYEPYFGLVTITASTGSSGTVGAPKIAGTFQAPSGQYYPAWPNFGAA ECCHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCH AAAAANQTPGYAPVGPGW HHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA