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The map label for this gene is yncB [H]

Identifier: 83719036

GI number: 83719036

Start: 2426828

End: 2427826

Strand: Direct

Name: yncB [H]

Synonym: BTH_I2148

Alternate gene names: 83719036

Gene position: 2426828-2427826 (Clockwise)

Preceding gene: 83721423

Following gene: 83719598

Centisome position: 63.71

GC content: 70.57

Gene sequence:

>999_bases
ATGTCTCAAATCAACCGGCAAGTGCTGCTCGTATCGCGCCCCGAGCGCGAGGCGAGCGTCGATAACTTCAAGCTCGTCGA
GACGCCGCTCGCGCCGCTCGCCGACGGCGAGGTGCGGGTGCGCAACCATTTCCTGTCGATCGATCCGTACATGCGCGGGC
GAATGAATGCGGGAAGGTCGTACGCCGAACCGCAGCCGCTCGGCGAGGTGATGGGCGGCGGCACCGCGGGCGAGGTCGTC
GAGTCGCGCAATCCGGCGTTCGCCGTCGGCGACAGGGTGATCGGCGCGTACGGCTGGCAGGAGTACGGCACGTCGACGGG
CAAGGAGCTGCGCAAGGTCGACACGACGCACGTGCCGCTGTCCGCGTATCTCGGGCCCGTCGGCATGCCCGGCGTGACCG
CGTGGTACGGCCTGAACCGGATCATCCGGCCGCGCGCGGGCGAGACGATCGTCGTCAGCGCGGCGAGCGGCGCGGTCGGC
AGCGTGGCCGGGCAGCTCGCGAAGCTTGCCGGGTGCCGCGCGGTCGGCGTCGCGGGCGGCGCGGACAAATGCCGCTACGT
CGTCGACACGCTCGGCTTCGACGCGTGCGTCGACTACAAGGCGGGCCGGCTCGCAGAAGATCTCGCGGCAGCCGCGCCGG
ACGGCGTCGACGGCTATTTCGAGAACGTCGGCGGCGCGGTGCTCGACGCGACGCTCGCGCGAATGAATCCGTTCGGCCGC
GTCGCGATGTGCGGGATGATCGCCACGTACGACGGCGCGCCGGCGCCGCTCGCGAACCCGGCGCTGATACTGCGCGAGCG
GCTGCTCGTGCAGGGCTTCATCGTGTCCGAGCACTTCGACGTGTGGCCCGAGGCGCTCGCGCAGCTCGCGTCGCTCGTCG
CGCGCCAGCAGCTGCATTATCGGGAGACGATCGCGCAGGGCATCGAGCGTGCCCCCGACGCGCTGCTCGGGCTGTTGAAG
GGGCGCAATTTCGGCAAGCAGCTCGTCGCGCTCGTCTGA

Upstream 100 bases:

>100_bases
GAGCGACGCGTGATGCAATCGAGCGGCCCCGCCCATCGGCGGGGCCGTTTGCCGTCGGCGCGGCCGCGCGCGCGACGATG
GACAGACAAGGAGGCAGGCG

Downstream 100 bases:

>100_bases
CGCGTCGTGGCATCATACGGCGCTTGTCCGGGCGCTTTCGCCGGCGCGCTCGCGCCGCTCGCCTGGCTGTATGTTTCGCC
GTTTGCCCTTGACGATGCCG

Product: zinc-binding dehydrogenase family oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 331

Protein sequence:

>332_residues
MSQINRQVLLVSRPEREASVDNFKLVETPLAPLADGEVRVRNHFLSIDPYMRGRMNAGRSYAEPQPLGEVMGGGTAGEVV
ESRNPAFAVGDRVIGAYGWQEYGTSTGKELRKVDTTHVPLSAYLGPVGMPGVTAWYGLNRIIRPRAGETIVVSAASGAVG
SVAGQLAKLAGCRAVGVAGGADKCRYVVDTLGFDACVDYKAGRLAEDLAAAAPDGVDGYFENVGGAVLDATLARMNPFGR
VAMCGMIATYDGAPAPLANPALILRERLLVQGFIVSEHFDVWPEALAQLASLVARQQLHYRETIAQGIERAPDALLGLLK
GRNFGKQLVALV

Sequences:

>Translated_332_residues
MSQINRQVLLVSRPEREASVDNFKLVETPLAPLADGEVRVRNHFLSIDPYMRGRMNAGRSYAEPQPLGEVMGGGTAGEVV
ESRNPAFAVGDRVIGAYGWQEYGTSTGKELRKVDTTHVPLSAYLGPVGMPGVTAWYGLNRIIRPRAGETIVVSAASGAVG
SVAGQLAKLAGCRAVGVAGGADKCRYVVDTLGFDACVDYKAGRLAEDLAAAAPDGVDGYFENVGGAVLDATLARMNPFGR
VAMCGMIATYDGAPAPLANPALILRERLLVQGFIVSEHFDVWPEALAQLASLVARQQLHYRETIAQGIERAPDALLGLLK
GRNFGKQLVALV
>Mature_331_residues
SQINRQVLLVSRPEREASVDNFKLVETPLAPLADGEVRVRNHFLSIDPYMRGRMNAGRSYAEPQPLGEVMGGGTAGEVVE
SRNPAFAVGDRVIGAYGWQEYGTSTGKELRKVDTTHVPLSAYLGPVGMPGVTAWYGLNRIIRPRAGETIVVSAASGAVGS
VAGQLAKLAGCRAVGVAGGADKCRYVVDTLGFDACVDYKAGRLAEDLAAAAPDGVDGYFENVGGAVLDATLARMNPFGRV
AMCGMIATYDGAPAPLANPALILRERLLVQGFIVSEHFDVWPEALAQLASLVARQQLHYRETIAQGIERAPDALLGLLKG
RNFGKQLVALV

Specific function: Unknown

COG id: COG2130

COG function: function code R; Putative NADP-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NADP-dependent oxidoreductase L4BD family [H]

Homologues:

Organism=Homo sapiens, GI226059159, Length=315, Percent_Identity=41.5873015873016, Blast_Score=221, Evalue=6e-58,
Organism=Homo sapiens, GI226059133, Length=315, Percent_Identity=41.5873015873016, Blast_Score=221, Evalue=6e-58,
Organism=Homo sapiens, GI226246682, Length=345, Percent_Identity=37.9710144927536, Blast_Score=211, Evalue=6e-55,
Organism=Homo sapiens, GI226246680, Length=345, Percent_Identity=37.9710144927536, Blast_Score=211, Evalue=6e-55,
Organism=Homo sapiens, GI22748929, Length=345, Percent_Identity=37.9710144927536, Blast_Score=211, Evalue=6e-55,
Organism=Homo sapiens, GI226056130, Length=260, Percent_Identity=42.6923076923077, Blast_Score=189, Evalue=3e-48,
Organism=Homo sapiens, GI28557745, Length=351, Percent_Identity=26.7806267806268, Blast_Score=84, Evalue=2e-16,
Organism=Escherichia coli, GI226510941, Length=335, Percent_Identity=45.0746268656716, Blast_Score=291, Evalue=5e-80,
Organism=Caenorhabditis elegans, GI133901710, Length=349, Percent_Identity=35.243553008596, Blast_Score=181, Evalue=4e-46,
Organism=Caenorhabditis elegans, GI133901712, Length=349, Percent_Identity=35.243553008596, Blast_Score=181, Evalue=4e-46,
Organism=Caenorhabditis elegans, GI17507255, Length=236, Percent_Identity=30.5084745762712, Blast_Score=67, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6323504, Length=328, Percent_Identity=30.4878048780488, Blast_Score=122, Evalue=9e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00107 ADH_zinc_N [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 35220; Mature: 35089

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQINRQVLLVSRPEREASVDNFKLVETPLAPLADGEVRVRNHFLSIDPYMRGRMNAGRS
CCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCEEEEHEEEECCHHHHHHCCCCCC
YAEPQPLGEVMGGGTAGEVVESRNPAFAVGDRVIGAYGWQEYGTSTGKELRKVDTTHVPL
CCCCCCHHHHHCCCCHHHHHHCCCCCEEECCHHHHHCCHHHHCCCHHHHHHHHCCCCCCH
SAYLGPVGMPGVTAWYGLNRIIRPRAGETIVVSAASGAVGSVAGQLAKLAGCRAVGVAGG
HHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEECCCC
ADKCRYVVDTLGFDACVDYKAGRLAEDLAAAAPDGVDGYFENVGGAVLDATLARMNPFGR
CHHHHHHHHHCCCHHHHCCCCHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHCCCCCH
VAMCGMIATYDGAPAPLANPALILRERLLVQGFIVSEHFDVWPEALAQLASLVARQQLHY
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RETIAQGIERAPDALLGLLKGRNFGKQLVALV
HHHHHHHHHHCHHHHHHHHHCCCHHHHHHHCC
>Mature Secondary Structure 
SQINRQVLLVSRPEREASVDNFKLVETPLAPLADGEVRVRNHFLSIDPYMRGRMNAGRS
CCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCEEEEHEEEECCHHHHHHCCCCCC
YAEPQPLGEVMGGGTAGEVVESRNPAFAVGDRVIGAYGWQEYGTSTGKELRKVDTTHVPL
CCCCCCHHHHHCCCCHHHHHHCCCCCEEECCHHHHHCCHHHHCCCHHHHHHHHCCCCCCH
SAYLGPVGMPGVTAWYGLNRIIRPRAGETIVVSAASGAVGSVAGQLAKLAGCRAVGVAGG
HHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEECCCC
ADKCRYVVDTLGFDACVDYKAGRLAEDLAAAAPDGVDGYFENVGGAVLDATLARMNPFGR
CHHHHHHHHHCCCHHHHCCCCHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHCCCCCH
VAMCGMIATYDGAPAPLANPALILRERLLVQGFIVSEHFDVWPEALAQLASLVARQQLHY
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RETIAQGIERAPDALLGLLKGRNFGKQLVALV
HHHHHHHHHHCHHHHHHHHHCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]