| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83719032
Identifier: 83719032
GI number: 83719032
Start: 2906086
End: 2907348
Strand: Direct
Name: 83719032
Synonym: BTH_I2549
Alternate gene names: NA
Gene position: 2906086-2907348 (Clockwise)
Preceding gene: 83720488
Following gene: 83721642
Centisome position: 76.29
GC content: 74.11
Gene sequence:
>1263_bases ATGAACCAGCAACGTTTCGTCCCGTCGTTCGCGCTCGCGGCTTGGCGCGTTCCGCTCACCGCGCTCGCGACCGCGTGCGT GCTCGCCGCGTGCGGCGGCAGCGACGTCACCGCGCCGCCGTCCGCCGGCGGCGGCAGCACCAGCGGGACCAGCGGCACGA GCGGCACCAGTGGCACGAGCGGCACCAGCGGCACGGCAGGCACGTCGGGCGTCGTCAACACGCTCGGCAAGACCGCGACC GATATCGGCAACACGATCGGCTCGACGAGCGTGCCGGGCCTCGGCAGCGGCGTCACGCAAGGCGTGGGCGCGACGGTCGG CAGCACGGGCGGCATCGTCGACGCCGCGGCGAACGCGCTCAGCAACGGCCTCGGCCAGATCGGCTCGACACAGAATCCGG TCGGCACGACGGTCGCTGGCCTCGGCAACGTCGTGAGCGCCGCGAGCAACACCGTGCAGGGCCTCAGCCAAACGGTGCAG GCGCTCGGCACGGGCCCGCTCGCCCCGCTCTCGCCCGTCACGACGCCGGTGGCGGGTGCGCTCGCGACGGCGGCGAACGG CGTGAACGCGGCCGGCACGATGCTCGGCAACGCGCTGTCGACGGGACCCGTTCAGCAAATCACGCAGCCGATCAGCTCGG CGGTCACGCCGCTCGTCATCACGGCGGGCCAGGTCACGCAGACGGTCGGCACGACGACGGGCGTCGGCCAGCCGGTATCG GGCCTGCTGCAGCAAGTCGGCGGCGCGATCAGCTCGGCCGGCAAGCAGATCGCGGGCACCTCGCCGTCGCAGCCGCTCGT CGGCGACGTCGGCCAGCTCGTGTCGGCGGTCGGCAACACCGTGACGAACGCGGGCGGCCTCGTGAATCCGGCCGCACCGA ACGGCGCGGCGCCGATCCCGGGCCTCATCACGAGCCTCGTCGGCGGCTCGACGGCGACGGTCGCGAGCGGCTCGACGAGC TCGGGCTCGACGCTCGGCAGCCCGCTGAGCGGCCTGCTGTCGAGCGTCGGCGGCGGCGCGCTGCCGACCGGCTCGCTCGG CGGCAGCGCGGTGTCGGGCGGCGCGAGCAACCCGCTCGCGCCGATCACGAGCCTCGCGAGCGGCGGCACGGGTGCTGGTA CAAACCCGCTCGCGCCCGTCACCGGTTTGCTCAATACTGTCACGGGCTCGCTGTCCGGCGCGACGTCGTCGACGGGCGGC TCGACGGGGCTCCTCGCCCCCGTGACGGGCACGCTCGGCACGCTGGGCAGTTTTGGCAAGTGA
Upstream 100 bases:
>100_bases CCCGTCACGTCGCTCGTCGGCGGCCTGCTCGGCGGCATCAAGAAGTAGAAGGGCCCGCGCCCATCCAGCAGCATCAGAGA AGACAGCGAGGAGCAGCATC
Downstream 100 bases:
>100_bases CGCGAAATACCGCGCGCTCCTTCCGGCAAGGAGCGCGCGGCGCAGTGGCAGTCGGATCAGACGATCAGAACAACGGAAGA CCACGTTGCGCGGCCCGCCA
Product: lipoprotein
Products: NA
Alternate protein names: Lipoprotein; Triple Helix Repeat-Containing Collagen; Collagen Triple Helix Repeat; Hemagglutinin Transmembrane Protein
Number of amino acids: Translated: 420; Mature: 420
Protein sequence:
>420_residues MNQQRFVPSFALAAWRVPLTALATACVLAACGGSDVTAPPSAGGGSTSGTSGTSGTSGTSGTSGTAGTSGVVNTLGKTAT DIGNTIGSTSVPGLGSGVTQGVGATVGSTGGIVDAAANALSNGLGQIGSTQNPVGTTVAGLGNVVSAASNTVQGLSQTVQ ALGTGPLAPLSPVTTPVAGALATAANGVNAAGTMLGNALSTGPVQQITQPISSAVTPLVITAGQVTQTVGTTTGVGQPVS GLLQQVGGAISSAGKQIAGTSPSQPLVGDVGQLVSAVGNTVTNAGGLVNPAAPNGAAPIPGLITSLVGGSTATVASGSTS SGSTLGSPLSGLLSSVGGGALPTGSLGGSAVSGGASNPLAPITSLASGGTGAGTNPLAPVTGLLNTVTGSLSGATSSTGG STGLLAPVTGTLGTLGSFGK
Sequences:
>Translated_420_residues MNQQRFVPSFALAAWRVPLTALATACVLAACGGSDVTAPPSAGGGSTSGTSGTSGTSGTSGTSGTAGTSGVVNTLGKTAT DIGNTIGSTSVPGLGSGVTQGVGATVGSTGGIVDAAANALSNGLGQIGSTQNPVGTTVAGLGNVVSAASNTVQGLSQTVQ ALGTGPLAPLSPVTTPVAGALATAANGVNAAGTMLGNALSTGPVQQITQPISSAVTPLVITAGQVTQTVGTTTGVGQPVS GLLQQVGGAISSAGKQIAGTSPSQPLVGDVGQLVSAVGNTVTNAGGLVNPAAPNGAAPIPGLITSLVGGSTATVASGSTS SGSTLGSPLSGLLSSVGGGALPTGSLGGSAVSGGASNPLAPITSLASGGTGAGTNPLAPVTGLLNTVTGSLSGATSSTGG STGLLAPVTGTLGTLGSFGK >Mature_420_residues MNQQRFVPSFALAAWRVPLTALATACVLAACGGSDVTAPPSAGGGSTSGTSGTSGTSGTSGTSGTAGTSGVVNTLGKTAT DIGNTIGSTSVPGLGSGVTQGVGATVGSTGGIVDAAANALSNGLGQIGSTQNPVGTTVAGLGNVVSAASNTVQGLSQTVQ ALGTGPLAPLSPVTTPVAGALATAANGVNAAGTMLGNALSTGPVQQITQPISSAVTPLVITAGQVTQTVGTTTGVGQPVS GLLQQVGGAISSAGKQIAGTSPSQPLVGDVGQLVSAVGNTVTNAGGLVNPAAPNGAAPIPGLITSLVGGSTATVASGSTS SGSTLGSPLSGLLSSVGGGALPTGSLGGSAVSGGASNPLAPITSLASGGTGAGTNPLAPVTGLLNTVTGSLSGATSSTGG STGLLAPVTGTLGTLGSFGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38286; Mature: 38286
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00227 TUBULIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQQRFVPSFALAAWRVPLTALATACVLAACGGSDVTAPPSAGGGSTSGTSGTSGTSGTS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GTSGTAGTSGVVNTLGKTATDIGNTIGSTSVPGLGSGVTQGVGATVGSTGGIVDAAANAL CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHH SNGLGQIGSTQNPVGTTVAGLGNVVSAASNTVQGLSQTVQALGTGPLAPLSPVTTPVAGA HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH LATAANGVNAAGTMLGNALSTGPVQQITQPISSAVTPLVITAGQVTQTVGTTTGVGQPVS HHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEECCHHHHHHCCCCCCCCCHH GLLQQVGGAISSAGKQIAGTSPSQPLVGDVGQLVSAVGNTVTNAGGLVNPAAPNGAAPIP HHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH GLITSLVGGSTATVASGSTSSGSTLGSPLSGLLSSVGGGALPTGSLGGSAVSGGASNPLA HHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH PITSLASGGTGAGTNPLAPVTGLLNTVTGSLSGATSSTGGSTGLLAPVTGTLGTLGSFGK HHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCHHHHHHHCCCCC >Mature Secondary Structure MNQQRFVPSFALAAWRVPLTALATACVLAACGGSDVTAPPSAGGGSTSGTSGTSGTSGTS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GTSGTAGTSGVVNTLGKTATDIGNTIGSTSVPGLGSGVTQGVGATVGSTGGIVDAAANAL CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHH SNGLGQIGSTQNPVGTTVAGLGNVVSAASNTVQGLSQTVQALGTGPLAPLSPVTTPVAGA HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH LATAANGVNAAGTMLGNALSTGPVQQITQPISSAVTPLVITAGQVTQTVGTTTGVGQPVS HHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEECCHHHHHHCCCCCCCCCHH GLLQQVGGAISSAGKQIAGTSPSQPLVGDVGQLVSAVGNTVTNAGGLVNPAAPNGAAPIP HHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH GLITSLVGGSTATVASGSTSSGSTLGSPLSGLLSSVGGGALPTGSLGGSAVSGGASNPLA HHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH PITSLASGGTGAGTNPLAPVTGLLNTVTGSLSGATSSTGGSTGLLAPVTGTLGTLGSFGK HHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA