| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is hutF [H]
Identifier: 83718915
GI number: 83718915
Start: 2049403
End: 2050785
Strand: Direct
Name: hutF [H]
Synonym: BTH_I1825
Alternate gene names: 83718915
Gene position: 2049403-2050785 (Clockwise)
Preceding gene: 83720898
Following gene: 83718611
Centisome position: 53.8
GC content: 71.73
Gene sequence:
>1383_bases ATGACGAGAATCGATTCGATGTTGTTTGCCGAGCACGCGTACCTGCCCGGCGGCTGGCGGCGCGACGTGCTGCTGCGCTG GGACGCGACGGGCGCGCTCGTCGACGTGAGCGCGAACGCGCAAGCGCCCGCGGGCGTCGCGCGTGCGAACGGGCCGCTCC TGCCCGGCATGCCGAACCTGCATTCGCACGCGTTCCAGCGCGCGATGGCGGGGCTCACCGAATATCGCGCGAATCCGTCC GACACGTTCTGGAGCTGGCGCGACCTGATGTACCGCTTCGCGCTGAAGATCACGCCCGACGCGCTCGCCGCGGTCGCGCG CTGGCTCTATGTCGAGATGCTCAAGTGCGGCTATACGTCGGTGTGCGAATTCCATTACGTTCACCACGCGCCGGACGGCG CGCGCTATCCGCGGCCGGCGGAACTGGCGGCGCGCGTCGCCGGCGCGGCGCGGGATGCGGGCATCGGCATCACGATGCTG CCCGTCGCGTATCAGTACAGCGGCTTCGGCGAGCGCGCGCCGCGCGACGATCAGCGCCGCTTCATCAACACGCCGGACGC GCTGCTCGCGCTTCTCGACGCGCTGCGCGGCGAGTTGCCCGAGCATGGCGGGCTGCGCTACGGAATCGCGCCGCATTCGC TGCGCGCGGTGTCGGAGAGCGGGCTGCGCGAACTGGTGGGCGCGATGCCGGCCGATGCGCCGGTGCACATCCACATCGCC GAGCAGACCGCGGAAGTCGACGATTGCGTGCGCGCGTACGGCGCGCGGCCCGTGCAATGGCTCCTCGATCGCTTCGACGT GGACGCGCGCTGGTGCCTCGTCCATGCGACGCATCTCGACGCGACGGAGACGCAGGCGCTCGCGCGCAGCGGCGCGATCG CGGGCTTGTGTCCGACGACCGAGGCGAATCTCGGCGACGGCATCTTTCCGGCGGTCGAGTATCTCGCGGCGGGCGGCATG ATCGGCATCGGCTCGGACAGCCACGCGAGCGTCGACTGGCGCGCCGAGTTGCGGCTGTTCGAATACGGGCAGCGGCTGGT GCGGCGCGAGCGCAACGTGCTTGCGGACGCGGCGCAGACTCACGTGGCGGACCGCCTGTTCGCGGCGTCGCTCGCGGGCG GCGCGCGCGCGGCCGGGCGTCCCGTCGGCGCGCTCGAGGCGGGCCGGCGCGCCGACTGGATCGTGCTCGATCCCGCGCAT CCGTCGGTCGCCGAGCACGGCAGCGATACGTGGCTGTCGGGTGCGGTGTTCGCCGAGCACGGCGACACGCCGGTGCTCGA CGTGTACGTCGGCGGCGAGCGGGTGGTGAGCGCGCGCCGGCATCGCGACGAAGAGGCGGCGTATGCCGGATATCGCGCGG CGCTTGCGCAGCTATTGAACTGA
Upstream 100 bases:
>100_bases GCGGAGCTTGCGTACTGGTTCGGCCGGCCGCTGTGCGAGCGGGTCGTGAAGGGCGGCGTGACGGTGTTCGCGCGCGATGC GCGCTGACCGGAAGACAAGC
Downstream 100 bases:
>100_bases AGCGCCGCCGCGTTGCGCGAACGCAGGACGCTGCGAAGAAACGGCGGCGCGAACGCGCCGCAACGCGGTTAGCATAGATC CGGCATCCGGCATCCGGCAT
Product: N-formimino-L-glutamate deiminase
Products: NA
Alternate protein names: MTA/SAH deaminase [H]
Number of amino acids: Translated: 460; Mature: 459
Protein sequence:
>460_residues MTRIDSMLFAEHAYLPGGWRRDVLLRWDATGALVDVSANAQAPAGVARANGPLLPGMPNLHSHAFQRAMAGLTEYRANPS DTFWSWRDLMYRFALKITPDALAAVARWLYVEMLKCGYTSVCEFHYVHHAPDGARYPRPAELAARVAGAARDAGIGITML PVAYQYSGFGERAPRDDQRRFINTPDALLALLDALRGELPEHGGLRYGIAPHSLRAVSESGLRELVGAMPADAPVHIHIA EQTAEVDDCVRAYGARPVQWLLDRFDVDARWCLVHATHLDATETQALARSGAIAGLCPTTEANLGDGIFPAVEYLAAGGM IGIGSDSHASVDWRAELRLFEYGQRLVRRERNVLADAAQTHVADRLFAASLAGGARAAGRPVGALEAGRRADWIVLDPAH PSVAEHGSDTWLSGAVFAEHGDTPVLDVYVGGERVVSARRHRDEEAAYAGYRAALAQLLN
Sequences:
>Translated_460_residues MTRIDSMLFAEHAYLPGGWRRDVLLRWDATGALVDVSANAQAPAGVARANGPLLPGMPNLHSHAFQRAMAGLTEYRANPS DTFWSWRDLMYRFALKITPDALAAVARWLYVEMLKCGYTSVCEFHYVHHAPDGARYPRPAELAARVAGAARDAGIGITML PVAYQYSGFGERAPRDDQRRFINTPDALLALLDALRGELPEHGGLRYGIAPHSLRAVSESGLRELVGAMPADAPVHIHIA EQTAEVDDCVRAYGARPVQWLLDRFDVDARWCLVHATHLDATETQALARSGAIAGLCPTTEANLGDGIFPAVEYLAAGGM IGIGSDSHASVDWRAELRLFEYGQRLVRRERNVLADAAQTHVADRLFAASLAGGARAAGRPVGALEAGRRADWIVLDPAH PSVAEHGSDTWLSGAVFAEHGDTPVLDVYVGGERVVSARRHRDEEAAYAGYRAALAQLLN >Mature_459_residues TRIDSMLFAEHAYLPGGWRRDVLLRWDATGALVDVSANAQAPAGVARANGPLLPGMPNLHSHAFQRAMAGLTEYRANPSD TFWSWRDLMYRFALKITPDALAAVARWLYVEMLKCGYTSVCEFHYVHHAPDGARYPRPAELAARVAGAARDAGIGITMLP VAYQYSGFGERAPRDDQRRFINTPDALLALLDALRGELPEHGGLRYGIAPHSLRAVSESGLRELVGAMPADAPVHIHIAE QTAEVDDCVRAYGARPVQWLLDRFDVDARWCLVHATHLDATETQALARSGAIAGLCPTTEANLGDGIFPAVEYLAAGGMI GIGSDSHASVDWRAELRLFEYGQRLVRRERNVLADAAQTHVADRLFAASLAGGARAAGRPVGALEAGRRADWIVLDPAHP SVAEHGSDTWLSGAVFAEHGDTPVLDVYVGGERVVSARRHRDEEAAYAGYRAALAQLLN
Specific function: Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine [H]
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MTA/SAH deaminase family [H]
Homologues:
Organism=Caenorhabditis elegans, GI17540282, Length=430, Percent_Identity=30.6976744186047, Blast_Score=202, Evalue=4e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.4.28 [H]
Molecular weight: Translated: 49876; Mature: 49745
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRIDSMLFAEHAYLPGGWRRDVLLRWDATGALVDVSANAQAPAGVARANGPLLPGMPNL CCCHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCH HSHAFQRAMAGLTEYRANPSDTFWSWRDLMYRFALKITPDALAAVARWLYVEMLKCGYTS HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHH VCEFHYVHHAPDGARYPRPAELAARVAGAARDAGIGITMLPVAYQYSGFGERAPRDDQRR HHHHHHEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHCCCCCCCCCCCCHHHH FINTPDALLALLDALRGELPEHGGLRYGIAPHSLRAVSESGLRELVGAMPADAPVHIHIA HCCCHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC EQTAEVDDCVRAYGARPVQWLLDRFDVDARWCLVHATHLDATETQALARSGAIAGLCPTT CHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHCCCCEEECCCC EANLGDGIFPAVEYLAAGGMIGIGSDSHASVDWRAELRLFEYGQRLVRRERNVLADAAQT CCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH HVADRLFAASLAGGARAAGRPVGALEAGRRADWIVLDPAHPSVAEHGSDTWLSGAVFAEH HHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCEEEECCCCCHHHHCCCCCEECCEEEECC GDTPVLDVYVGGERVVSARRHRDEEAAYAGYRAALAQLLN CCCCEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHC >Mature Secondary Structure TRIDSMLFAEHAYLPGGWRRDVLLRWDATGALVDVSANAQAPAGVARANGPLLPGMPNL CCHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCH HSHAFQRAMAGLTEYRANPSDTFWSWRDLMYRFALKITPDALAAVARWLYVEMLKCGYTS HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHH VCEFHYVHHAPDGARYPRPAELAARVAGAARDAGIGITMLPVAYQYSGFGERAPRDDQRR HHHHHHEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHCCCCCCCCCCCCHHHH FINTPDALLALLDALRGELPEHGGLRYGIAPHSLRAVSESGLRELVGAMPADAPVHIHIA HCCCHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC EQTAEVDDCVRAYGARPVQWLLDRFDVDARWCLVHATHLDATETQALARSGAIAGLCPTT CHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHCCCCEEECCCC EANLGDGIFPAVEYLAAGGMIGIGSDSHASVDWRAELRLFEYGQRLVRRERNVLADAAQT CCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH HVADRLFAASLAGGARAAGRPVGALEAGRRADWIVLDPAHPSVAEHGSDTWLSGAVFAEH HHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCEEEECCCCCHHHHCCCCCEECCEEEECC GDTPVLDVYVGGERVVSARRHRDEEAAYAGYRAALAQLLN CCCCEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA