| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83718905
Identifier: 83718905
GI number: 83718905
Start: 3145443
End: 3147425
Strand: Reverse
Name: 83718905
Synonym: BTH_I2739
Alternate gene names: NA
Gene position: 3147425-3145443 (Counterclockwise)
Preceding gene: 83721466
Following gene: 83720578
Centisome position: 82.63
GC content: 51.69
Gene sequence:
>1983_bases ATGACAACAAATATCGACCTCTCCGGTACCACGGAAATCGGCAACGAGGGTATTAAGAAACATTTCAAGAGCATCGAGCC TTGGCAGCCATTGTTCGAACTCGTCTGGAACGGATTCGATGCCAAGGCCGATCTAGTGGAAGTGGACGTTCGGCTCAACA GTCTGAGCGCCTTGGCAACTGTGCGTATTCTGGATGACGGCGACGGTATCGATCCGACAACTCTGAAGCACACGTTTGGC CGATTTAACGACTCCCACAAGCGTGAGGACGCAGCGCAGCATGGTGCGCACGGCCGCGGTCGGCTCTCCTTTCATCGTAT TTGCCGCTTCGCGACTTGGCACACCAAGTCCGCCTATGGGCAGGCGCGAATCGCCATCGACGCCATGACGATTAAGGACT ACCGCGCCCAGTTTGTGTCCGACGAGACGCAATGCTCGGCCTTGCGCGAGCAAGCGAAAGGCACTTTGGTCGAGTTGTCG GAATTCTCGTGTCAGCTCCCTGGGGCTGATGAGCTACGCGCGAAGTTCGCGGTTGAATTCGGGTGGTTTCTTGCCCTGCA CCCGTCGAAGACGCTGAAGTTGAATGGTGGGCTAATCCCTGTCCCGAGCAACGAAATTACCCAGCAGATCCTTACCCCTG GTAAGTATGCATTTGACGTGCAGGTGATCCGCTGGGACGAGAGACCTAGTTCGGAGAAGTCGTACACATATCTGTTGGAT TCCGCTGGCAGAATCGTTTACAAACAGCTTAGCGCACTCAACAATAAGGCTGGTTTCTTTACCAGTATTTATATCAGTTC TCCATGGGCAGATACGTTTGCTCATGATGAGAATTTATTTCAACCTGATGCGCATACGCCCAATGCCGCAGAGTGGAAGA AGCTTTTGCGCCAGGTCGGCGATTTGGCGCAAACCGTGTACGACCAATTTCTTCGGAAGAAGGCGGCAGTAGAAGTCGAA AAATACGTTGACGATGGTTTGTTTCCGACATATGTGGAATTGCCTCCAGACGAGCGATCATGGCGCTTTGACAATACGAA GCAACTGATCACGTCGATATACGTTGCAGATCCTTCGGTGTTCAATGCGGCTAGCAAGAAGCAACGAAAAATCATTATCC GCCTTCTGGATCGGCTGGCGGTTTCCAACGAGAATGACTCTCTATTTGATGTGCTCAACAGCGTACTCGACCTAGAAGAA GGGGCAATTAAGTCACTCGCGGATCAACTCAAACAGACAACGCTGGAAAATATCATTGCGACCATTGAGATCTTGCAGCG TCGTCAGACCGCAGCCTCGAAGCTTCGCGCGTTAATGAACGATCATTATCGGGACGTCCTTGAAACACCGGATCTGCAGA AGATCATCGAGAACAACACATGGTTGTTTGGACCCGGTTATGAGACGCTTGGAGCTGAGGAAGATACGTTTACGAAGATC GCTAAGGATCTACGCAACAAGATTCCGCAGATCGATAACATTGGTGCGGACGATGTAGACGATGAGCAAGCCGACATCGC GGGCGCGCGACGTCAAACAGACCTATTTCTTGCGCGTCGCGTGCCCACGATCGCACCAAACGGGCAGCAGATTTATCGCT GCGTGATCATTGAGATTAAGCGGCCGGGCATTTCGCTTAACGTAAAGCACTTGCGCCAGCTTGATGACTACGCGAACATC ATCAAGAAGCATCCTGAGTTCGGAAGTGAGAAGATGCACTTCGAATTGATCTTGATCGGCAGGAAAATTTCATCGACTGA TACCGAGATTCCGAGTCGCCTGCGCGGGCAAATTGCCCGAGGGGAACTCGGGCTCGTCAGTGATGACCCTCGCATGAAGC GCTACGTGCTGAATTGGTATACCCTCCTTGATTCGTTTGAACTCGCTAATGCGTTTCTTTTGGAGCAGCTAAAGCTCAGG CGTGACTTGTTTAACCAGTCAACGAAGGACCAGCTCGTTGACGATTTGCAAGCAACAACCTAG
Upstream 100 bases:
>100_bases GTCGGCGTACTTTCGTAAACGTCTACGGTTAGTGAAATGGGCTTTCGCCGCCCCCGCGGCGCCATAGGGGCGAAGTCATG AAAATTTGCAAAAGGTCACC
Downstream 100 bases:
>100_bases GTGTGCGTTTCCTCGATGCGTTATTCACATGTGAGCTGCATCGCGCGTGAGTGATAACTTGGCCGCCGTTTTCAAGCTCT GTTAGTTAGGTGCTGGCCTA
Product: DNA mismatch repair protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 660; Mature: 659
Protein sequence:
>660_residues MTTNIDLSGTTEIGNEGIKKHFKSIEPWQPLFELVWNGFDAKADLVEVDVRLNSLSALATVRILDDGDGIDPTTLKHTFG RFNDSHKREDAAQHGAHGRGRLSFHRICRFATWHTKSAYGQARIAIDAMTIKDYRAQFVSDETQCSALREQAKGTLVELS EFSCQLPGADELRAKFAVEFGWFLALHPSKTLKLNGGLIPVPSNEITQQILTPGKYAFDVQVIRWDERPSSEKSYTYLLD SAGRIVYKQLSALNNKAGFFTSIYISSPWADTFAHDENLFQPDAHTPNAAEWKKLLRQVGDLAQTVYDQFLRKKAAVEVE KYVDDGLFPTYVELPPDERSWRFDNTKQLITSIYVADPSVFNAASKKQRKIIIRLLDRLAVSNENDSLFDVLNSVLDLEE GAIKSLADQLKQTTLENIIATIEILQRRQTAASKLRALMNDHYRDVLETPDLQKIIENNTWLFGPGYETLGAEEDTFTKI AKDLRNKIPQIDNIGADDVDDEQADIAGARRQTDLFLARRVPTIAPNGQQIYRCVIIEIKRPGISLNVKHLRQLDDYANI IKKHPEFGSEKMHFELILIGRKISSTDTEIPSRLRGQIARGELGLVSDDPRMKRYVLNWYTLLDSFELANAFLLEQLKLR RDLFNQSTKDQLVDDLQATT
Sequences:
>Translated_660_residues MTTNIDLSGTTEIGNEGIKKHFKSIEPWQPLFELVWNGFDAKADLVEVDVRLNSLSALATVRILDDGDGIDPTTLKHTFG RFNDSHKREDAAQHGAHGRGRLSFHRICRFATWHTKSAYGQARIAIDAMTIKDYRAQFVSDETQCSALREQAKGTLVELS EFSCQLPGADELRAKFAVEFGWFLALHPSKTLKLNGGLIPVPSNEITQQILTPGKYAFDVQVIRWDERPSSEKSYTYLLD SAGRIVYKQLSALNNKAGFFTSIYISSPWADTFAHDENLFQPDAHTPNAAEWKKLLRQVGDLAQTVYDQFLRKKAAVEVE KYVDDGLFPTYVELPPDERSWRFDNTKQLITSIYVADPSVFNAASKKQRKIIIRLLDRLAVSNENDSLFDVLNSVLDLEE GAIKSLADQLKQTTLENIIATIEILQRRQTAASKLRALMNDHYRDVLETPDLQKIIENNTWLFGPGYETLGAEEDTFTKI AKDLRNKIPQIDNIGADDVDDEQADIAGARRQTDLFLARRVPTIAPNGQQIYRCVIIEIKRPGISLNVKHLRQLDDYANI IKKHPEFGSEKMHFELILIGRKISSTDTEIPSRLRGQIARGELGLVSDDPRMKRYVLNWYTLLDSFELANAFLLEQLKLR RDLFNQSTKDQLVDDLQATT >Mature_659_residues TTNIDLSGTTEIGNEGIKKHFKSIEPWQPLFELVWNGFDAKADLVEVDVRLNSLSALATVRILDDGDGIDPTTLKHTFGR FNDSHKREDAAQHGAHGRGRLSFHRICRFATWHTKSAYGQARIAIDAMTIKDYRAQFVSDETQCSALREQAKGTLVELSE FSCQLPGADELRAKFAVEFGWFLALHPSKTLKLNGGLIPVPSNEITQQILTPGKYAFDVQVIRWDERPSSEKSYTYLLDS AGRIVYKQLSALNNKAGFFTSIYISSPWADTFAHDENLFQPDAHTPNAAEWKKLLRQVGDLAQTVYDQFLRKKAAVEVEK YVDDGLFPTYVELPPDERSWRFDNTKQLITSIYVADPSVFNAASKKQRKIIIRLLDRLAVSNENDSLFDVLNSVLDLEEG AIKSLADQLKQTTLENIIATIEILQRRQTAASKLRALMNDHYRDVLETPDLQKIIENNTWLFGPGYETLGAEEDTFTKIA KDLRNKIPQIDNIGADDVDDEQADIAGARRQTDLFLARRVPTIAPNGQQIYRCVIIEIKRPGISLNVKHLRQLDDYANII KKHPEFGSEKMHFELILIGRKISSTDTEIPSRLRGQIARGELGLVSDDPRMKRYVLNWYTLLDSFELANAFLLEQLKLRR DLFNQSTKDQLVDDLQATT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74876; Mature: 74744
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTNIDLSGTTEIGNEGIKKHFKSIEPWQPLFELVWNGFDAKADLVEVDVRLNSLSALAT CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEEEHHHHCEEEE VRILDDGDGIDPTTLKHTFGRFNDSHKREDAAQHGAHGRGRLSFHRICRFATWHTKSAYG EEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCC QARIAIDAMTIKDYRAQFVSDETQCSALREQAKGTLVELSEFSCQLPGADELRAKFAVEF CEEEEEEEEHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEHHCCCCCCCHHHHHHHHHEEE GWFLALHPSKTLKLNGGLIPVPSNEITQQILTPGKYAFDVQVIRWDERPSSEKSYTYLLD EEEEEECCCCEEEECCCEEECCCHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCEEEEEC SAGRIVYKQLSALNNKAGFFTSIYISSPWADTFAHDENLFQPDAHTPNAAEWKKLLRQVG CCCHHHHHHHHHHCCCCCEEEEEEEECCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH DLAQTVYDQFLRKKAAVEVEKYVDDGLFPTYVELPPDERSWRFDNTKQLITSIYVADPSV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCHH FNAASKKQRKIIIRLLDRLAVSNENDSLFDVLNSVLDLEEGAIKSLADQLKQTTLENIIA HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH TIEILQRRQTAASKLRALMNDHYRDVLETPDLQKIIENNTWLFGPGYETLGAEEDTFTKI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEECCCCHHCCCCHHHHHHH AKDLRNKIPQIDNIGADDVDDEQADIAGARRQTDLFLARRVPTIAPNGQQIYRCVIIEIK HHHHHHHCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEE RPGISLNVKHLRQLDDYANIIKKHPEFGSEKMHFELILIGRKISSTDTEIPSRLRGQIAR CCCCEECHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHCCHHC GELGLVSDDPRMKRYVLNWYTLLDSFELANAFLLEQLKLRRDLFNQSTKDQLVDDLQATT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC >Mature Secondary Structure TTNIDLSGTTEIGNEGIKKHFKSIEPWQPLFELVWNGFDAKADLVEVDVRLNSLSALAT CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEEEHHHHCEEEE VRILDDGDGIDPTTLKHTFGRFNDSHKREDAAQHGAHGRGRLSFHRICRFATWHTKSAYG EEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCC QARIAIDAMTIKDYRAQFVSDETQCSALREQAKGTLVELSEFSCQLPGADELRAKFAVEF CEEEEEEEEHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEHHCCCCCCCHHHHHHHHHEEE GWFLALHPSKTLKLNGGLIPVPSNEITQQILTPGKYAFDVQVIRWDERPSSEKSYTYLLD EEEEEECCCCEEEECCCEEECCCHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCEEEEEC SAGRIVYKQLSALNNKAGFFTSIYISSPWADTFAHDENLFQPDAHTPNAAEWKKLLRQVG CCCHHHHHHHHHHCCCCCEEEEEEEECCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH DLAQTVYDQFLRKKAAVEVEKYVDDGLFPTYVELPPDERSWRFDNTKQLITSIYVADPSV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCHH FNAASKKQRKIIIRLLDRLAVSNENDSLFDVLNSVLDLEEGAIKSLADQLKQTTLENIIA HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH TIEILQRRQTAASKLRALMNDHYRDVLETPDLQKIIENNTWLFGPGYETLGAEEDTFTKI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEECCCCHHCCCCHHHHHHH AKDLRNKIPQIDNIGADDVDDEQADIAGARRQTDLFLARRVPTIAPNGQQIYRCVIIEIK HHHHHHHCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEE RPGISLNVKHLRQLDDYANIIKKHPEFGSEKMHFELILIGRKISSTDTEIPSRLRGQIAR CCCCEECHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHCCHHC GELGLVSDDPRMKRYVLNWYTLLDSFELANAFLLEQLKLRRDLFNQSTKDQLVDDLQATT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA