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The map label for this gene is 83718834

Identifier: 83718834

GI number: 83718834

Start: 2609866

End: 2610360

Strand: Reverse

Name: 83718834

Synonym: BTH_I2318

Alternate gene names: NA

Gene position: 2610360-2609866 (Counterclockwise)

Preceding gene: 83720144

Following gene: 83718742

Centisome position: 68.53

GC content: 72.12

Gene sequence:

>495_bases
ATGAAGATACGAAACCTGTCGATCACCGCCGTCGGATTCGCGCTCGCGCTCGGCCTGTCGGCCTGCGGCCAGCGCGACGG
CGGCGCGCCGCCCGCCGCCGCGTCGGCGTCGATCGCGCCCGCCGCGTCCGTCACGGTCGATGCGTCCGCGAACGCGAGCC
CGTCGGCCGCATCCACGCCCGCCGCTTCGAGCGATGCGGCACCCGCGGCGCCCGTGACGACGGCCGCCGCGGACGCGCCG
AACCCCGCCGGCGAGAAGGTATTCAAGAGCGTGTGCTTCATGTGCCACCAGACGGGCGCGGCCGGCGCGCCGATCGCCGG
CAACAAGGACGACTGGGCGCCGCGCATCGCGCAAGGCAAGCCGACGCTGTACAAGCACGCGCTCGAGGGCTTCACCGGCA
ACAAGGGCACGATGCCGCCGCGCGGCGGCAATCCGAGCCTGAAGGACAACGAAGTCGAAGCCGCCGTCGACTTCATGGTC
GCCAAGGTGCACTGA

Upstream 100 bases:

>100_bases
GCCGAAGCGCCGCTGCTCGGCCACGAACTCCCTTGCGCGCGCGGATCGTCGCCCGGCGCGCAGGCAATCGCATCCTGACA
CCCCCCACGAGGAAATCACC

Downstream 100 bases:

>100_bases
TCGCACTGACGCGGGCGGACGCGGCGCGATCGACGTCGCGCGCGCGGCCGCCCGCGCGACTCCCTCCAAGTGACCCACAT
GAAAGCACTGCTCCGGATCC

Product: cytochrome c family protein

Products: NA

Alternate protein names: Cytochrome c555 [H]

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MKIRNLSITAVGFALALGLSACGQRDGGAPPAAASASIAPAASVTVDASANASPSAASTPAASSDAAPAAPVTTAAADAP
NPAGEKVFKSVCFMCHQTGAAGAPIAGNKDDWAPRIAQGKPTLYKHALEGFTGNKGTMPPRGGNPSLKDNEVEAAVDFMV
AKVH

Sequences:

>Translated_164_residues
MKIRNLSITAVGFALALGLSACGQRDGGAPPAAASASIAPAASVTVDASANASPSAASTPAASSDAAPAAPVTTAAADAP
NPAGEKVFKSVCFMCHQTGAAGAPIAGNKDDWAPRIAQGKPTLYKHALEGFTGNKGTMPPRGGNPSLKDNEVEAAVDFMV
AKVH
>Mature_164_residues
MKIRNLSITAVGFALALGLSACGQRDGGAPPAAASASIAPAASVTVDASANASPSAASTPAASSDAAPAAPVTTAAADAP
NPAGEKVFKSVCFMCHQTGAAGAPIAGNKDDWAPRIAQGKPTLYKHALEGFTGNKGTMPPRGGNPSLKDNEVEAAVDFMV
AKVH

Specific function: This basic c-type monoheme cytochrome has been found exclusively in the green photosynthetic bacteria, although its role in bacterial photosynthesis is not established. It has an unusually low redox potential compared with mitochondrial cytochrome c. It i

COG id: COG3245

COG function: function code C; Cytochrome c5

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR002323 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 16152; Mature: 16152

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIRNLSITAVGFALALGLSACGQRDGGAPPAAASASIAPAASVTVDASANASPSAASTP
CCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC
AASSDAAPAAPVTTAAADAPNPAGEKVFKSVCFMCHQTGAAGAPIAGNKDDWAPRIAQGK
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PTLYKHALEGFTGNKGTMPPRGGNPSLKDNEVEAAVDFMVAKVH
CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKIRNLSITAVGFALALGLSACGQRDGGAPPAAASASIAPAASVTVDASANASPSAASTP
CCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC
AASSDAAPAAPVTTAAADAPNPAGEKVFKSVCFMCHQTGAAGAPIAGNKDDWAPRIAQGK
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PTLYKHALEGFTGNKGTMPPRGGNPSLKDNEVEAAVDFMVAKVH
CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12093901 [H]