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The map label for this gene is yccS [C]

Identifier: 83718833

GI number: 83718833

Start: 3278439

End: 3280715

Strand: Direct

Name: yccS [C]

Synonym: BTH_I2853

Alternate gene names: 83718833

Gene position: 3278439-3280715 (Clockwise)

Preceding gene: 83718493

Following gene: 83719715

Centisome position: 86.07

GC content: 66.45

Gene sequence:

>2277_bases
ATGCGCTATTCGGTCGAAATCAGGAAGTTTTTCTACAGCCAGTATTTCTTCGGCGGCCTACGGATCGCGCTCGGCGTATC
GCTGCCCGCGGTGCTGAGCCTCATCGTGCTGCACGACCGCGAGCTCGGCTTCACGATCGCGACAGGCGCGCTCGGCGCAT
GCGTCGTCGACATGCCCGGCCCGCTCAAGTACAAGCACAACGAAATGCTCGCGTGCAGCGTGATCGGCTTCTTCTCCGCG
CTCGCCACCGGGCTCGCGACGCCGAACATCTTCGCGCTGTGGCTCACGATCGTGCCGCTCACGTTCGCGTTGTCGCTCAT
CGTCGTCTACGGCAACCGCTGGCCGCAGATCAGCTTCGCGACGCTGTTCATGATGGTGATGACGCTCGAAGAAAAGTTCA
CGCCGCTGCAGGCGCTCGTCAACGCGTCGTGGATTCTCGCGGGCGGGCTCTGGTACACGTACTGGGCGACGATCGTGTCG
CGCTGGCAAGCGCGCCGCATCGAGCAGCAGGCGCTCGCCGAAAGCCTCTTCGCGTGCGCGTCGTACCTGCTCGCGCGCGC
GGATTTCTATGATCTGGACGCGGATCTCGACGAGTGCTACCGCAATCTCGTCGCCCGGCAGATCACCGCGGTGGAGACGC
AGGAAACCGCGCGCGACATCGTGCTGCGCAACCTGCCGAAGCTGCGCCGAGGCAAGCTCGACCCGGGCCGCACGATGATG
TTCAACCTGTTCATCAACAGCGTCGATCTGCACGAGATGTTCGTCGGCGCGCACACCGACTACCCGCTCGTGCGCAGCAC
GTTCGGCGGCTCGGACCTGATGATTTTCTATCGCGACCTGATCCGCAAGGCGGCGGCCGATCTGGAGGAAATCGGCTTCG
CGGTGCTCGAGAACCGGCTGCCGCATTCGCGGATCAGCGTGAAGGCCGAGTTGCGCGCGATCGAATACGAGATCGAGCTG
ATGCGCAAGAAGCAGTTCGCGGCGACGAACCCGGAAGCGTACGCGGCCGTGCTCGCGACGTTCCGCCGGATCTGGAGCGC
GACGCGCCTCATCGACAAGATGCGGCGCAACCTGTCGGGCAGCGCCGACGCGCAGCAGACCGAACTGAAGATCGACAAGG
CGCTCACGCGCTTCCTGCAGAAACGCCGGATGTCGCCGCTGCTGATTTTCTCGAATCTGAACATGGGCTCGCCGAGCTTC
CGGCACGCGCTGCGCGTGACGATCGCGGTGGCGGTCGGCTTCTGGCTCGGGCGCCTGCTGCCGCTCACGAACGCGTACTG
GATCGTGATGACGAGCATCATCATCCTGAAGCCGGGCTATTCGCTGACGAAGCAGCGCAACGTGCAGCGTATCGTCGGCA
CGCTGATCGGCTGCACGGCGAGTCTCGCGCTGATCTACACGGTGCACGAGCCGCACGTGCTGATCGCGATCATGTTCGCG
TCGATGGTGATGAGCTACAGCCTGCTGCTCTTCAACTACGCGGCGAGCGTCGTGTTCACGTCGTCGTACGTGCTGCTGCT
CTTCCACCTGCTCGCGCCCGGCAACATGCGGATCATCGGCGAGCGCGCGATCGACACCGTCGTCGGCTGCATGATCGCGA
TCGCCGCAAGCCGCCTCTTCCCGTACTGGGAATATCGCGCGATCGGCAAGCTCGTCGCCGACGTGCTCACGACGACGCGC
AAGTACTTCGAGGCGACGTGGCGCGCGGGCCGCGGCAAGACGGCCGCCGCCGTGCCGGCGGCCGACGGCGCGACGGCCGT
GCCCGCAGTCGCGGCCGTCGTCGACGCGGCGGTGCCCGGCCTCGACGGCGACTACCCGTACCGGCTCGCGCGCAAGAACG
TGCACATCGCGTTCGCGAACCTCGGCCAGGCGTTCCAGCGGATGATGCTCGAACCGAAGGCGCACCAGAAGTTCGTGCCG
GAGCTCAACGATCTGCTCGTGCAGACTCACGTGCTCGGCGCGCAGATCACCGCGGCCGCGCCGCTGCTGCGCCACGCGTG
CGAGCAGGGCAACCCGCCCGCGCTCGAGCGCGGGATGGCCGCCGTGCGCGAGCATCTCGAGCAGGCCGAGGCCGGCGCGC
CGCCGCCGCCGAACCAGGCCGACGCGACCCGGCAACTGACGCGCGAGCTCGATTCGATGGTGGTCGACGCCGAGCGCTCG
GACACGAGCGCCGATCTCGCGCACGATCTGAAGGTGCTTGCGCACCAGTGCAAGCAGATGCTCGCGTCGTCGCTGCTGAT
CCGCAAGGACGCGAGCGTGATCCGGCTGCCCGAGTGA

Upstream 100 bases:

>100_bases
GGCCGGCCCCGAATCACGGCTTTCGCGACGCGGAAATACGATAGACTCGTCGCCAACCAGAACATCCCCGACGCCCCGTC
GCCAGCTCACTCGCCCATCG

Downstream 100 bases:

>100_bases
GCCGCTCGCGTCAACCTTCCCTTTCCGCCGTTTCGCGCCGCGCACGCCCTCAGGGATTCCCTGACTACTGCCCGCGCGCG
CCGATTGGTATGATCTATCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 758; Mature: 758

Protein sequence:

>758_residues
MRYSVEIRKFFYSQYFFGGLRIALGVSLPAVLSLIVLHDRELGFTIATGALGACVVDMPGPLKYKHNEMLACSVIGFFSA
LATGLATPNIFALWLTIVPLTFALSLIVVYGNRWPQISFATLFMMVMTLEEKFTPLQALVNASWILAGGLWYTYWATIVS
RWQARRIEQQALAESLFACASYLLARADFYDLDADLDECYRNLVARQITAVETQETARDIVLRNLPKLRRGKLDPGRTMM
FNLFINSVDLHEMFVGAHTDYPLVRSTFGGSDLMIFYRDLIRKAAADLEEIGFAVLENRLPHSRISVKAELRAIEYEIEL
MRKKQFAATNPEAYAAVLATFRRIWSATRLIDKMRRNLSGSADAQQTELKIDKALTRFLQKRRMSPLLIFSNLNMGSPSF
RHALRVTIAVAVGFWLGRLLPLTNAYWIVMTSIIILKPGYSLTKQRNVQRIVGTLIGCTASLALIYTVHEPHVLIAIMFA
SMVMSYSLLLFNYAASVVFTSSYVLLLFHLLAPGNMRIIGERAIDTVVGCMIAIAASRLFPYWEYRAIGKLVADVLTTTR
KYFEATWRAGRGKTAAAVPAADGATAVPAVAAVVDAAVPGLDGDYPYRLARKNVHIAFANLGQAFQRMMLEPKAHQKFVP
ELNDLLVQTHVLGAQITAAAPLLRHACEQGNPPALERGMAAVREHLEQAEAGAPPPPNQADATRQLTRELDSMVVDAERS
DTSADLAHDLKVLAHQCKQMLASSLLIRKDASVIRLPE

Sequences:

>Translated_758_residues
MRYSVEIRKFFYSQYFFGGLRIALGVSLPAVLSLIVLHDRELGFTIATGALGACVVDMPGPLKYKHNEMLACSVIGFFSA
LATGLATPNIFALWLTIVPLTFALSLIVVYGNRWPQISFATLFMMVMTLEEKFTPLQALVNASWILAGGLWYTYWATIVS
RWQARRIEQQALAESLFACASYLLARADFYDLDADLDECYRNLVARQITAVETQETARDIVLRNLPKLRRGKLDPGRTMM
FNLFINSVDLHEMFVGAHTDYPLVRSTFGGSDLMIFYRDLIRKAAADLEEIGFAVLENRLPHSRISVKAELRAIEYEIEL
MRKKQFAATNPEAYAAVLATFRRIWSATRLIDKMRRNLSGSADAQQTELKIDKALTRFLQKRRMSPLLIFSNLNMGSPSF
RHALRVTIAVAVGFWLGRLLPLTNAYWIVMTSIIILKPGYSLTKQRNVQRIVGTLIGCTASLALIYTVHEPHVLIAIMFA
SMVMSYSLLLFNYAASVVFTSSYVLLLFHLLAPGNMRIIGERAIDTVVGCMIAIAASRLFPYWEYRAIGKLVADVLTTTR
KYFEATWRAGRGKTAAAVPAADGATAVPAVAAVVDAAVPGLDGDYPYRLARKNVHIAFANLGQAFQRMMLEPKAHQKFVP
ELNDLLVQTHVLGAQITAAAPLLRHACEQGNPPALERGMAAVREHLEQAEAGAPPPPNQADATRQLTRELDSMVVDAERS
DTSADLAHDLKVLAHQCKQMLASSLLIRKDASVIRLPE
>Mature_758_residues
MRYSVEIRKFFYSQYFFGGLRIALGVSLPAVLSLIVLHDRELGFTIATGALGACVVDMPGPLKYKHNEMLACSVIGFFSA
LATGLATPNIFALWLTIVPLTFALSLIVVYGNRWPQISFATLFMMVMTLEEKFTPLQALVNASWILAGGLWYTYWATIVS
RWQARRIEQQALAESLFACASYLLARADFYDLDADLDECYRNLVARQITAVETQETARDIVLRNLPKLRRGKLDPGRTMM
FNLFINSVDLHEMFVGAHTDYPLVRSTFGGSDLMIFYRDLIRKAAADLEEIGFAVLENRLPHSRISVKAELRAIEYEIEL
MRKKQFAATNPEAYAAVLATFRRIWSATRLIDKMRRNLSGSADAQQTELKIDKALTRFLQKRRMSPLLIFSNLNMGSPSF
RHALRVTIAVAVGFWLGRLLPLTNAYWIVMTSIIILKPGYSLTKQRNVQRIVGTLIGCTASLALIYTVHEPHVLIAIMFA
SMVMSYSLLLFNYAASVVFTSSYVLLLFHLLAPGNMRIIGERAIDTVVGCMIAIAASRLFPYWEYRAIGKLVADVLTTTR
KYFEATWRAGRGKTAAAVPAADGATAVPAVAAVVDAAVPGLDGDYPYRLARKNVHIAFANLGQAFQRMMLEPKAHQKFVP
ELNDLLVQTHVLGAQITAAAPLLRHACEQGNPPALERGMAAVREHLEQAEAGAPPPPNQADATRQLTRELDSMVVDAERS
DTSADLAHDLKVLAHQCKQMLASSLLIRKDASVIRLPE

Specific function: Unknown

COG id: COG1289

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yccS/yhfK family [H]

Homologues:

Organism=Escherichia coli, GI87081808, Length=648, Percent_Identity=22.2222222222222, Blast_Score=122, Evalue=1e-28,
Organism=Escherichia coli, GI87082248, Length=432, Percent_Identity=26.8518518518519, Blast_Score=87, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010019
- InterPro:   IPR010020 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 84313; Mature: 84313

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYSVEIRKFFYSQYFFGGLRIALGVSLPAVLSLIVLHDRELGFTIATGALGACVVDMPG
CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEECCCCCEEEECCCC
PLKYKHNEMLACSVIGFFSALATGLATPNIFALWLTIVPLTFALSLIVVYGNRWPQISFA
CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
TLFMMVMTLEEKFTPLQALVNASWILAGGLWYTYWATIVSRWQARRIEQQALAESLFACA
HHHHHHHHHHHHCCHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SYLLARADFYDLDADLDECYRNLVARQITAVETQETARDIVLRNLPKLRRGKLDPGRTMM
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHEE
FNLFINSVDLHEMFVGAHTDYPLVRSTFGGSDLMIFYRDLIRKAAADLEEIGFAVLENRL
EEHHHCCCHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCC
PHSRISVKAELRAIEYEIELMRKKQFAATNPEAYAAVLATFRRIWSATRLIDKMRRNLSG
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SADAQQTELKIDKALTRFLQKRRMSPLLIFSNLNMGSPSFRHALRVTIAVAVGFWLGRLL
CCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
PLTNAYWIVMTSIIILKPGYSLTKQRNVQRIVGTLIGCTASLALIYTVHEPHVLIAIMFA
HHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHH
SMVMSYSLLLFNYAASVVFTSSYVLLLFHLLAPGNMRIIGERAIDTVVGCMIAIAASRLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHC
PYWEYRAIGKLVADVLTTTRKYFEATWRAGRGKTAAAVPAADGATAVPAVAAVVDAAVPG
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCC
LDGDYPYRLARKNVHIAFANLGQAFQRMMLEPKAHQKFVPELNDLLVQTHVLGAQITAAA
CCCCCCHHHHHCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLLRHACEQGNPPALERGMAAVREHLEQAEAGAPPPPNQADATRQLTRELDSMVVDAERS
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHEECCCCC
DTSADLAHDLKVLAHQCKQMLASSLLIRKDASVIRLPE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC
>Mature Secondary Structure
MRYSVEIRKFFYSQYFFGGLRIALGVSLPAVLSLIVLHDRELGFTIATGALGACVVDMPG
CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEECCCCCEEEECCCC
PLKYKHNEMLACSVIGFFSALATGLATPNIFALWLTIVPLTFALSLIVVYGNRWPQISFA
CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
TLFMMVMTLEEKFTPLQALVNASWILAGGLWYTYWATIVSRWQARRIEQQALAESLFACA
HHHHHHHHHHHHCCHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SYLLARADFYDLDADLDECYRNLVARQITAVETQETARDIVLRNLPKLRRGKLDPGRTMM
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHEE
FNLFINSVDLHEMFVGAHTDYPLVRSTFGGSDLMIFYRDLIRKAAADLEEIGFAVLENRL
EEHHHCCCHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCC
PHSRISVKAELRAIEYEIELMRKKQFAATNPEAYAAVLATFRRIWSATRLIDKMRRNLSG
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SADAQQTELKIDKALTRFLQKRRMSPLLIFSNLNMGSPSFRHALRVTIAVAVGFWLGRLL
CCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
PLTNAYWIVMTSIIILKPGYSLTKQRNVQRIVGTLIGCTASLALIYTVHEPHVLIAIMFA
HHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHH
SMVMSYSLLLFNYAASVVFTSSYVLLLFHLLAPGNMRIIGERAIDTVVGCMIAIAASRLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHC
PYWEYRAIGKLVADVLTTTRKYFEATWRAGRGKTAAAVPAADGATAVPAVAAVVDAAVPG
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCC
LDGDYPYRLARKNVHIAFANLGQAFQRMMLEPKAHQKFVPELNDLLVQTHVLGAQITAAA
CCCCCCHHHHHCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLLRHACEQGNPPALERGMAAVREHLEQAEAGAPPPPNQADATRQLTRELDSMVVDAERS
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHEECCCCC
DTSADLAHDLKVLAHQCKQMLASSLLIRKDASVIRLPE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]