| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83718826
Identifier: 83718826
GI number: 83718826
Start: 3097448
End: 3100246
Strand: Reverse
Name: 83718826
Synonym: BTH_I2705
Alternate gene names: NA
Gene position: 3100246-3097448 (Counterclockwise)
Preceding gene: 83720101
Following gene: 83721167
Centisome position: 81.39
GC content: 71.17
Gene sequence:
>2799_bases ATGAGCGTGGTCACGCAATTCACGTCGCTTTTCAGCGCTGCCAATTGTCTCTATTCCCTCGATGGGGCGGGCGAAATCGC GTCGCTGCAGATCGAGCGCTGGGTGGGGCGCGAGACGCTCTCCGACAATTTCCAGTGGGACGTCTACGCGCTCGCGACCG ATCCCGGTCTCGATCTCGACGCGATGCTCGGCCAGCGCGTGACGATTCGCACCGCACTCGCGGACGGCACGAGCGCGGTG CGCAGCGGGCTCGTGGCGCAAGCCGAGTGCATCGGCTACGACGCCGGCCTCGCGCGGTACTACCTGCAGCTCGTGCCGTG GCTCGCCGCGCTCGCGCACGGGCGCGACGAGCGCACGTTCGTGCGGCAGGGCATCGCGGACGTGCTCGGCGCGGTGTTCG CGCCGTACGGCGCGATCGCCCGCTGGCGCTTCACGGCGGACGCGAACCAGCGTATCGCGGAGCTCGGCGCGCGCGACTAC CGCGTGCAGTACCGGACCCACACGCATGTCGATTTCGTTCGGCACGTGCTCGCCGAAGCGGGGCTCGGCTTTTGCTTCGT CGAAGACGCGGAAGCGCCCGCCGGCCACGCGATGCTGATCTTCGACGACAGCGCGCAACTGCCCGAGGACGACACGTCCG CGCGCATGGGCGGCGTGCCGCAGCGGCTGAGCGGCACGGCGACGGAGCCGGACGACGCGATCGTCGGCATCGGGCAGTCG CTGTCGCTCACCGCGGATCGCGTCACGCTGATCAGCAGCGATTACCGCGGCAATCAGTCGACGACTGCGACGGCGAGCCT CGGCAGCCCGGCCGGATCGCGCGAACTGTACGACGACGTCGGGCCGGAGGCGTTCGACAGCCTGCGCGAAGCCGACGACG CCGCGCGCCGGCACGCGGACGCGATCATTTCCGCGGCGCGCTTCTGGACGGGCTACAGCACGTTGCGCACCGCGCGCGTC GGCCGCGCGCTGCGCATCGCGGGCGCGACGTGGCGCATGCCGCGCGGCGGCGCGCAGGCGCCCGACGCGTTCGTGCTGAC GCGCGTCGATCAAATCGGCGTCAACAATCTGCCCGCGACCGTGATGGAACGCATCGAGCGCGGCCTCGGCCCGCTGCCGC TCGTGAATCTCGATGCGCGCGTGCTCGCGCAGGCGAAGGCGGGTGGCTATGCGAACCGGTTCGATGCCGTGCCGCGCGAC CAGGCATGGCGCCCGACGCTGGAAGACGGCACCGGGCAGCGGCTGAACCCCGTGCCGACGGCGCTCGGCGCGCAGACGGC GATCGTCGTCGGGCCGCAGGGCGAGTCGCGGCCGGGCTCGACGGGCCCGGTGCACACCGATGCGCAGGGCAGACTGCGGC TGCGCTATCACTGGCAGGCGGACGGCGACACGGGCACCTATCCGACGCGCGCGATGCAGCGGCTCGCGAGCCAGGGCCAT GGGCTGCAGCAGACACAGCGAATCGGCCACGAAGTGCTCGTGCAGTTCGTCAACGGCCTCGTGCACCGGCCGATCGTGCT CGGCGGGCTGTTCAACGGCCGAGGCGAGGGCGGCGAAGCGCCGACGCCCGGCGGCGAAGCGGGGCAGCCGCTCGACGAAT CGATTTACACGCAGGCCGCCGATCATGTGGCGAGCGCGCAAGGCAATCTCGCGGGCGGCCATAGCCCCGCATGGCACGGC GCGGGCGGCGGCGCGAAGCGCCACAATCATGCGGGCGCGCTGTCCGGCTTCAAGAGCCAGGGGTTCGACGGGCAGGGCTA CAACCAACTCGTCGCGGACGATACCGATCGCATGGGCCGCATGCAGATGGCGACGACGCACGCGGCGACCCAGCTCAACA TCGGCCACCTGCGCCATCAGGCCGACAACTATCTCGGCAGTTTTCGCGGGCAAGGCGTCGAGCTGCGCTCGGACGCGTAC GGCGCGCTGCGCGGCGCGCGCGGCGTGCTGATCTCCAGCTATGCGCCGACGGGGCCGTCGCAGCCGGCGGGCGACGCGTC GGCGCTGCAGTCGCTGCTCGCGCAACAGGCGACGCTCGCGAAGCTCCTCGACAAATCGGCCGATACGCACAAGACCTTGC CGTTCGCCGCGCAGCGCGGCGCGGAGCAGGCCGGGCAGTCCTCGATGAACGGCGACGCCGCGCCGCTCGACGCGCTCAGG AAGAGCTTCGCGACGACGGTCGGCGCAGACGGCTACGCGCAGGCGTCTGCCGAGGCGTCGAGCCGCTCGGCGGGCAATGC GCTGCCGCATACGGGCGACGCGGTGCTCGGGATCGAGGCGAAGGGCGGCCACGGTCTGCTGGCGGGCCAGTCACTGCAAT GGACGGTGGGCGAGACGCTGACCGTCGGCAGCGGCAGCGACACGAATCTCGCGGTCAGTCGGACGCTGCGCATTCACAGC GGACAGGGCATCGGCTGGCTCGCCGGCGCGAACGGCGTGCAAGGCGTCGGCATGAGCGTGATCGCCGGCAAGGACGATCT GACGCTGCAGGCGCAGCATGACGTGATGGCGCTGCGCGCGCGCGACGATCTGAAGGTCGCGTCGATCGGCGCGGATGTCG AGATCGCGGCGAAGCAGACCGTGCGCCTCGCGGTCAGCGGCGGCGCGCATCTGACGATCGAAGGCGGCAACGTCACGTTC GGCTGCCCGGGCTCGCTCGTCGTCCACGCGGCGCAGCACACGTTCGTCGGGCCGGATCAACTGGCCCCCGCGCTGCCGCA GTTTCCCGAGAAAGTGTGCGTCGAGTGCCTGAAGCACGCGATGCAATCGGGCAGCGCCCTCGCGGGCAAGGCGATCTGA
Upstream 100 bases:
>100_bases GAGTGATGTCGCGCAGCTCAGTGGTTTTATTCGTCGTCCCGTTTTCGTCGCAACGAGCCGTATTCAAAAAATAGTCGAAC CCTGAGAGAGCGGGATTCTC
Downstream 100 bases:
>100_bases GCATGGCGACCGAGATCTTCGACTGGATCGATCCGTATCCGGCGGACACGCTGCCGCGTCTGCGGCAAGTGCTGGATGCG GCTTCGACGAACGGGCGCTG
Product: Rhs element Vgr protein
Products: NA
Alternate protein names: Type VI Secretion System Vgr Family Protein; VGR-Related Protein; Rhs Element Vgr Family Protein; Vgr-Related Protein; VGR-Like Protein; Rhs Element Vgr Family; VGR-Related Type VI Secretion System Protein; Vgr Related Protein; Rhs Element Vgr Related Protein; Rhs Element Vgr-Related Protein; Type VI Secretion System VgrG Family Protein; Rhs Family Protein; VgrG Protein
Number of amino acids: Translated: 932; Mature: 931
Protein sequence:
>932_residues MSVVTQFTSLFSAANCLYSLDGAGEIASLQIERWVGRETLSDNFQWDVYALATDPGLDLDAMLGQRVTIRTALADGTSAV RSGLVAQAECIGYDAGLARYYLQLVPWLAALAHGRDERTFVRQGIADVLGAVFAPYGAIARWRFTADANQRIAELGARDY RVQYRTHTHVDFVRHVLAEAGLGFCFVEDAEAPAGHAMLIFDDSAQLPEDDTSARMGGVPQRLSGTATEPDDAIVGIGQS LSLTADRVTLISSDYRGNQSTTATASLGSPAGSRELYDDVGPEAFDSLREADDAARRHADAIISAARFWTGYSTLRTARV GRALRIAGATWRMPRGGAQAPDAFVLTRVDQIGVNNLPATVMERIERGLGPLPLVNLDARVLAQAKAGGYANRFDAVPRD QAWRPTLEDGTGQRLNPVPTALGAQTAIVVGPQGESRPGSTGPVHTDAQGRLRLRYHWQADGDTGTYPTRAMQRLASQGH GLQQTQRIGHEVLVQFVNGLVHRPIVLGGLFNGRGEGGEAPTPGGEAGQPLDESIYTQAADHVASAQGNLAGGHSPAWHG AGGGAKRHNHAGALSGFKSQGFDGQGYNQLVADDTDRMGRMQMATTHAATQLNIGHLRHQADNYLGSFRGQGVELRSDAY GALRGARGVLISSYAPTGPSQPAGDASALQSLLAQQATLAKLLDKSADTHKTLPFAAQRGAEQAGQSSMNGDAAPLDALR KSFATTVGADGYAQASAEASSRSAGNALPHTGDAVLGIEAKGGHGLLAGQSLQWTVGETLTVGSGSDTNLAVSRTLRIHS GQGIGWLAGANGVQGVGMSVIAGKDDLTLQAQHDVMALRARDDLKVASIGADVEIAAKQTVRLAVSGGAHLTIEGGNVTF GCPGSLVVHAAQHTFVGPDQLAPALPQFPEKVCVECLKHAMQSGSALAGKAI
Sequences:
>Translated_932_residues MSVVTQFTSLFSAANCLYSLDGAGEIASLQIERWVGRETLSDNFQWDVYALATDPGLDLDAMLGQRVTIRTALADGTSAV RSGLVAQAECIGYDAGLARYYLQLVPWLAALAHGRDERTFVRQGIADVLGAVFAPYGAIARWRFTADANQRIAELGARDY RVQYRTHTHVDFVRHVLAEAGLGFCFVEDAEAPAGHAMLIFDDSAQLPEDDTSARMGGVPQRLSGTATEPDDAIVGIGQS LSLTADRVTLISSDYRGNQSTTATASLGSPAGSRELYDDVGPEAFDSLREADDAARRHADAIISAARFWTGYSTLRTARV GRALRIAGATWRMPRGGAQAPDAFVLTRVDQIGVNNLPATVMERIERGLGPLPLVNLDARVLAQAKAGGYANRFDAVPRD QAWRPTLEDGTGQRLNPVPTALGAQTAIVVGPQGESRPGSTGPVHTDAQGRLRLRYHWQADGDTGTYPTRAMQRLASQGH GLQQTQRIGHEVLVQFVNGLVHRPIVLGGLFNGRGEGGEAPTPGGEAGQPLDESIYTQAADHVASAQGNLAGGHSPAWHG AGGGAKRHNHAGALSGFKSQGFDGQGYNQLVADDTDRMGRMQMATTHAATQLNIGHLRHQADNYLGSFRGQGVELRSDAY GALRGARGVLISSYAPTGPSQPAGDASALQSLLAQQATLAKLLDKSADTHKTLPFAAQRGAEQAGQSSMNGDAAPLDALR KSFATTVGADGYAQASAEASSRSAGNALPHTGDAVLGIEAKGGHGLLAGQSLQWTVGETLTVGSGSDTNLAVSRTLRIHS GQGIGWLAGANGVQGVGMSVIAGKDDLTLQAQHDVMALRARDDLKVASIGADVEIAAKQTVRLAVSGGAHLTIEGGNVTF GCPGSLVVHAAQHTFVGPDQLAPALPQFPEKVCVECLKHAMQSGSALAGKAI >Mature_931_residues SVVTQFTSLFSAANCLYSLDGAGEIASLQIERWVGRETLSDNFQWDVYALATDPGLDLDAMLGQRVTIRTALADGTSAVR SGLVAQAECIGYDAGLARYYLQLVPWLAALAHGRDERTFVRQGIADVLGAVFAPYGAIARWRFTADANQRIAELGARDYR VQYRTHTHVDFVRHVLAEAGLGFCFVEDAEAPAGHAMLIFDDSAQLPEDDTSARMGGVPQRLSGTATEPDDAIVGIGQSL SLTADRVTLISSDYRGNQSTTATASLGSPAGSRELYDDVGPEAFDSLREADDAARRHADAIISAARFWTGYSTLRTARVG RALRIAGATWRMPRGGAQAPDAFVLTRVDQIGVNNLPATVMERIERGLGPLPLVNLDARVLAQAKAGGYANRFDAVPRDQ AWRPTLEDGTGQRLNPVPTALGAQTAIVVGPQGESRPGSTGPVHTDAQGRLRLRYHWQADGDTGTYPTRAMQRLASQGHG LQQTQRIGHEVLVQFVNGLVHRPIVLGGLFNGRGEGGEAPTPGGEAGQPLDESIYTQAADHVASAQGNLAGGHSPAWHGA GGGAKRHNHAGALSGFKSQGFDGQGYNQLVADDTDRMGRMQMATTHAATQLNIGHLRHQADNYLGSFRGQGVELRSDAYG ALRGARGVLISSYAPTGPSQPAGDASALQSLLAQQATLAKLLDKSADTHKTLPFAAQRGAEQAGQSSMNGDAAPLDALRK SFATTVGADGYAQASAEASSRSAGNALPHTGDAVLGIEAKGGHGLLAGQSLQWTVGETLTVGSGSDTNLAVSRTLRIHSG QGIGWLAGANGVQGVGMSVIAGKDDLTLQAQHDVMALRARDDLKVASIGADVEIAAKQTVRLAVSGGAHLTIEGGNVTFG CPGSLVVHAAQHTFVGPDQLAPALPQFPEKVCVECLKHAMQSGSALAGKAI
Specific function: Unknown
COG id: COG3501
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 97659; Mature: 97528
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00047 HISTONE_H4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVVTQFTSLFSAANCLYSLDGAGEIASLQIERWVGRETLSDNFQWDVYALATDPGLDLD CCHHHHHHHHHHHHHHHEECCCCCCEEEEEHHHHHCHHHHCCCCCEEEEEEECCCCCCHH AMLGQRVTIRTALADGTSAVRSGLVAQAECIGYDAGLARYYLQLVPWLAALAHGRDERTF HHHCCCEEEEEECCCCHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHH VRQGIADVLGAVFAPYGAIARWRFTADANQRIAELGARDYRVQYRTHTHVDFVRHVLAEA HHHHHHHHHHHHHCCCCHHEEEEEECCHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHC GLGFCFVEDAEAPAGHAMLIFDDSAQLPEDDTSARMGGVPQRLSGTATEPDDAIVGIGQS CCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCHHHCCCCHHHCCCCCCCCCCEEECCCC LSLTADRVTLISSDYRGNQSTTATASLGSPAGSRELYDDVGPEAFDSLREADDAARRHAD CEECCCEEEEEECCCCCCCCCEEEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHH AIISAARFWTGYSTLRTARVGRALRIAGATWRMPRGGAQAPDAFVLTRVDQIGVNNLPAT HHHHHHHHHHHHHHHHHHHHCCEEEECCCEECCCCCCCCCCCCEEEEEHHHCCCCCCCHH VMERIERGLGPLPLVNLDARVLAQAKAGGYANRFDAVPRDQAWRPTLEDGTGQRLNPVPT HHHHHHHCCCCCCEECCCHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCH ALGAQTAIVVGPQGESRPGSTGPVHTDAQGRLRLRYHWQADGDTGTYPTRAMQRLASQGH HCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHCCC GLQQTQRIGHEVLVQFVNGLVHRPIVLGGLFNGRGEGGEAPTPGGEAGQPLDESIYTQAA CHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH DHVASAQGNLAGGHSPAWHGAGGGAKRHNHAGALSGFKSQGFDGQGYNQLVADDTDRMGR HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHCCCCCCCCCCHHCCCHHHHCC MQMATTHAATQLNIGHLRHQADNYLGSFRGQGVELRSDAYGALRGARGVLISSYAPTGPS CHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHCCCCEEEECCCCCCCC QPAGDASALQSLLAQQATLAKLLDKSADTHKTLPFAAQRGAEQAGQSSMNGDAAPLDALR CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCHHHHCCCCCCCCCCHHHHHH KSFATTVGADGYAQASAEASSRSAGNALPHTGDAVLGIEAKGGHGLLAGQSLQWTVGETL HHHHHHCCCCCCHHCCCHHCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCEEEECCCEE TVGSGSDTNLAVSRTLRIHSGQGIGWLAGANGVQGVGMSVIAGKDDLTLQAQHDVMALRA EECCCCCCCEEEEEEEEEECCCCCEEEECCCCCCCCCEEEEECCCCEEEEECCCEEEEEC RDDLKVASIGADVEIAAKQTVRLAVSGGAHLTIEGGNVTFGCPGSLVVHAAQHTFVGPDQ CCCCEEEECCCCEEEECCCEEEEEEECCCEEEEECCEEEECCCCHHEEEEHHHCCCCHHH LAPALPQFPEKVCVECLKHAMQSGSALAGKAI HCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SVVTQFTSLFSAANCLYSLDGAGEIASLQIERWVGRETLSDNFQWDVYALATDPGLDLD CHHHHHHHHHHHHHHHEECCCCCCEEEEEHHHHHCHHHHCCCCCEEEEEEECCCCCCHH AMLGQRVTIRTALADGTSAVRSGLVAQAECIGYDAGLARYYLQLVPWLAALAHGRDERTF HHHCCCEEEEEECCCCHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHH VRQGIADVLGAVFAPYGAIARWRFTADANQRIAELGARDYRVQYRTHTHVDFVRHVLAEA HHHHHHHHHHHHHCCCCHHEEEEEECCHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHC GLGFCFVEDAEAPAGHAMLIFDDSAQLPEDDTSARMGGVPQRLSGTATEPDDAIVGIGQS CCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCHHHCCCCHHHCCCCCCCCCCEEECCCC LSLTADRVTLISSDYRGNQSTTATASLGSPAGSRELYDDVGPEAFDSLREADDAARRHAD CEECCCEEEEEECCCCCCCCCEEEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHH AIISAARFWTGYSTLRTARVGRALRIAGATWRMPRGGAQAPDAFVLTRVDQIGVNNLPAT HHHHHHHHHHHHHHHHHHHHCCEEEECCCEECCCCCCCCCCCCEEEEEHHHCCCCCCCHH VMERIERGLGPLPLVNLDARVLAQAKAGGYANRFDAVPRDQAWRPTLEDGTGQRLNPVPT HHHHHHHCCCCCCEECCCHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCH ALGAQTAIVVGPQGESRPGSTGPVHTDAQGRLRLRYHWQADGDTGTYPTRAMQRLASQGH HCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHCCC GLQQTQRIGHEVLVQFVNGLVHRPIVLGGLFNGRGEGGEAPTPGGEAGQPLDESIYTQAA CHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH DHVASAQGNLAGGHSPAWHGAGGGAKRHNHAGALSGFKSQGFDGQGYNQLVADDTDRMGR HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHCCCCCCCCCCHHCCCHHHHCC MQMATTHAATQLNIGHLRHQADNYLGSFRGQGVELRSDAYGALRGARGVLISSYAPTGPS CHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHCCCCEEEECCCCCCCC QPAGDASALQSLLAQQATLAKLLDKSADTHKTLPFAAQRGAEQAGQSSMNGDAAPLDALR CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCHHHHCCCCCCCCCCHHHHHH KSFATTVGADGYAQASAEASSRSAGNALPHTGDAVLGIEAKGGHGLLAGQSLQWTVGETL HHHHHHCCCCCCHHCCCHHCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCEEEECCCEE TVGSGSDTNLAVSRTLRIHSGQGIGWLAGANGVQGVGMSVIAGKDDLTLQAQHDVMALRA EECCCCCCCEEEEEEEEEECCCCCEEEECCCCCCCCCEEEEECCCCEEEEECCCEEEEEC RDDLKVASIGADVEIAAKQTVRLAVSGGAHLTIEGGNVTFGCPGSLVVHAAQHTFVGPDQ CCCCEEEECCCCEEEECCCEEEEEEECCCEEEEECCEEEECCCCHHEEEEHHHCCCCHHH LAPALPQFPEKVCVECLKHAMQSGSALAGKAI HCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA