| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83718801
Identifier: 83718801
GI number: 83718801
Start: 3697145
End: 3697687
Strand: Reverse
Name: 83718801
Synonym: BTH_I3243
Alternate gene names: NA
Gene position: 3697687-3697145 (Counterclockwise)
Preceding gene: 83718984
Following gene: 83718964
Centisome position: 97.07
GC content: 56.35
Gene sequence:
>543_bases TTGGACCAGCTTTACGTTGTCCTCCAACGTGCCTCGGCCATCGCCAGAACCGTACCAAACCGTGTGGCCGACCAGTTCCG GCGCGCGAAGAAGCACCTACCTCAAACTACTGAGGCAGAGCGCCTGGTGGTACAACGTGTCGGGCAAGACTTGTATCGAA GCGCACTGATGGATTACTGGCAGGGACGCTGCTGCGTAACGGGCCTCGCCGTCCCGGGCTTGCTACGAGCGTCGCACATC AAGCCTTGGGCTAAGTGCCAAAGTGACGACGAGAGGCTGGACGTGTTCAACGGGTTTCTGCTTGCACCACATGTTGATGC GCTGTTCGACGATGGTTGGATTTCATTCTCGGACCAAGGCAGCTTACTTGTGTCTGATGCGTTGCCGTCCGCTGCCAGGA CTCAATTGGGGGTATCCCCTGAATGGACAATTCAGAATGTGAAGCCAGCTCATGTGCCATACCTGATGTTCCACAGAGCC AACGAGTTTCGTAAGGACTCTTTGTTCGCTCGCCGCGAAGGCTCGAAAGAGGAAACGGCTTGA
Upstream 100 bases:
>100_bases AGCGATTCACCTCCGCCATCAACTGAGACCTTTAACCGGCCTCAGCACACGAAATTCCTGACACGTCCGCGCAGCCATCA GTGACATCTCTGTTGGTGAT
Downstream 100 bases:
>100_bases CCTTGAGCACGGTTATCGAAATCGTACGCACCTTGAGACAGGAATCATACATGCGGACGACCCGAGGCGGGTGGCTCAAA AGGCGTTACCGTGCCTCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: Type II Restriction HphI; GTPase Subunit Of Restriction Endonuclease; Type II Restriction Endonuclease; Restriction Endonuclease-Like Protein; Site-Specific Deoxyribonuclease; Type II Restriction- System Restriction Subunit; Restiction Endonuclease
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MDQLYVVLQRASAIARTVPNRVADQFRRAKKHLPQTTEAERLVVQRVGQDLYRSALMDYWQGRCCVTGLAVPGLLRASHI KPWAKCQSDDERLDVFNGFLLAPHVDALFDDGWISFSDQGSLLVSDALPSAARTQLGVSPEWTIQNVKPAHVPYLMFHRA NEFRKDSLFARREGSKEETA
Sequences:
>Translated_180_residues MDQLYVVLQRASAIARTVPNRVADQFRRAKKHLPQTTEAERLVVQRVGQDLYRSALMDYWQGRCCVTGLAVPGLLRASHI KPWAKCQSDDERLDVFNGFLLAPHVDALFDDGWISFSDQGSLLVSDALPSAARTQLGVSPEWTIQNVKPAHVPYLMFHRA NEFRKDSLFARREGSKEETA >Mature_180_residues MDQLYVVLQRASAIARTVPNRVADQFRRAKKHLPQTTEAERLVVQRVGQDLYRSALMDYWQGRCCVTGLAVPGLLRASHI KPWAKCQSDDERLDVFNGFLLAPHVDALFDDGWISFSDQGSLLVSDALPSAARTQLGVSPEWTIQNVKPAHVPYLMFHRA NEFRKDSLFARREGSKEETA
Specific function: Unknown
COG id: COG3440
COG function: function code V; Predicted restriction endonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20353; Mature: 20353
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQLYVVLQRASAIARTVPNRVADQFRRAKKHLPQTTEAERLVVQRVGQDLYRSALMDYW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH QGRCCVTGLAVPGLLRASHIKPWAKCQSDDERLDVFNGFLLAPHVDALFDDGWISFSDQG CCCCEEEHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHCEECCCCHHHHHCCCCEEECCCC SLLVSDALPSAARTQLGVSPEWTIQNVKPAHVPYLMFHRANEFRKDSLFARREGSKEETA CEEEECCCCHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MDQLYVVLQRASAIARTVPNRVADQFRRAKKHLPQTTEAERLVVQRVGQDLYRSALMDYW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH QGRCCVTGLAVPGLLRASHIKPWAKCQSDDERLDVFNGFLLAPHVDALFDDGWISFSDQG CCCCEEEHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHCEECCCCHHHHHCCCCEEECCCC SLLVSDALPSAARTQLGVSPEWTIQNVKPAHVPYLMFHRANEFRKDSLFARREGSKEETA CEEEECCCCHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA