| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83718776
Identifier: 83718776
GI number: 83718776
Start: 3219715
End: 3220482
Strand: Reverse
Name: 83718776
Synonym: BTH_I2804
Alternate gene names: NA
Gene position: 3220482-3219715 (Counterclockwise)
Preceding gene: 83719453
Following gene: 83720867
Centisome position: 84.54
GC content: 71.74
Gene sequence:
>768_bases ATGATCGACATGCTCGGAAAGGTCGTCGCGCACAACGGACTCGTCGCGTCGTTCGCGCTCGTCGGCTGCGTCATGTTCGC GTCGGCGGCGCTGTCGAAGAAGCTCACGCTCGGCCGCGTGCACGGCTCGGCGATCGCGATCGTGATCGGCCTTGCGCTCG CGTACCTCGGCGGCGCGTACACGGGCGGCGAGAAAGGCATCGCCGACGTGCCGCTGTTCGCGGGCGTCGGCCTGATGGGC GGCGCGATGCTGCGCGACTTCGCGATCGTCGCGACCGCGTTCGAGGTGCAGCCCGCGGAGGCGCGCAAGGCGGGGCTCGT CGGCGTCGTGTCGCTGCTGCTCGGCACGGTGCTGCCGTTCATCGTCGGCGCGAGCGTCGCGCGCGCGTTCGGCTATTCGG ACGCGGTCAGCATGACGACGATCGGCGCGGGCGCCGTCACGTACATCGTCGGCCCCGTGACGGGCGCGGCGATCGGCGCG AGCTCCGACGTGATCGCGCTCAGCATCGCGACGGGCCTCGTGAAGGCGATCATCGTGATGGTCGGCACGCCGTTCGCGGC GAGCTTCATGGGGCTGCGCACGCCGCGCGCGGCGATGATCTTCGGCGGGCTCGCGGGCACCGTGAGCGGCGTGAGCGCCG GGCTCGCGGCGACCGACCGCAGGCTCGTGCCGTACGGCGCGCTGATCGCGACGTTCCATACGGGCGTCGGGTGCCTGCTC GGGCCGTCGGTGCTGTTTTTCGCGACGAAGGCGGTGCTCGGGGCGTGA
Upstream 100 bases:
>100_bases GTGTGCGCGGCCTGCATCGCGGTGCTCGCGCGCGTCGGCCGCGACGCGACCACGCTCGCGGCGCTGCCGCAGCCCGAAGA GAACTGAAGGGGAGGCGGCC
Downstream 100 bases:
>100_bases AGTCGCCCATCGCGCGCGGCGGGCCGGTCGATCGGCACGCGCGAGGCGGCGGTGAGTGCGGCGCGATGCCGCGAAGGCGG CGCGCGTCGCGTCCGGCGCA
Product: malonate transporter subunit M
Products: NA
Alternate protein names: Malonate/Sodium Symporter MadM Subunit; Malonate Transporter; Malonate Transporter Subunit MadM; MalonateSodium Symporter Subunit MadM; Malonate Transporter-Like Membrane Protein; Facilitator Superfamily Transporter; Malonate Transporter M Subunit; Signal Transduction Histidine Kinase LytS
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MIDMLGKVVAHNGLVASFALVGCVMFASAALSKKLTLGRVHGSAIAIVIGLALAYLGGAYTGGEKGIADVPLFAGVGLMG GAMLRDFAIVATAFEVQPAEARKAGLVGVVSLLLGTVLPFIVGASVARAFGYSDAVSMTTIGAGAVTYIVGPVTGAAIGA SSDVIALSIATGLVKAIIVMVGTPFAASFMGLRTPRAAMIFGGLAGTVSGVSAGLAATDRRLVPYGALIATFHTGVGCLL GPSVLFFATKAVLGA
Sequences:
>Translated_255_residues MIDMLGKVVAHNGLVASFALVGCVMFASAALSKKLTLGRVHGSAIAIVIGLALAYLGGAYTGGEKGIADVPLFAGVGLMG GAMLRDFAIVATAFEVQPAEARKAGLVGVVSLLLGTVLPFIVGASVARAFGYSDAVSMTTIGAGAVTYIVGPVTGAAIGA SSDVIALSIATGLVKAIIVMVGTPFAASFMGLRTPRAAMIFGGLAGTVSGVSAGLAATDRRLVPYGALIATFHTGVGCLL GPSVLFFATKAVLGA >Mature_255_residues MIDMLGKVVAHNGLVASFALVGCVMFASAALSKKLTLGRVHGSAIAIVIGLALAYLGGAYTGGEKGIADVPLFAGVGLMG GAMLRDFAIVATAFEVQPAEARKAGLVGVVSLLLGTVLPFIVGASVARAFGYSDAVSMTTIGAGAVTYIVGPVTGAAIGA SSDVIALSIATGLVKAIIVMVGTPFAASFMGLRTPRAAMIFGGLAGTVSGVSAGLAATDRRLVPYGALIATFHTGVGCLL GPSVLFFATKAVLGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25132; Mature: 25132
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDMLGKVVAHNGLVASFALVGCVMFASAALSKKLTLGRVHGSAIAIVIGLALAYLGGAY CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC TGGEKGIADVPLFAGVGLMGGAMLRDFAIVATAFEVQPAEARKAGLVGVVSLLLGTVLPF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH IVGASVARAFGYSDAVSMTTIGAGAVTYIVGPVTGAAIGASSDVIALSIATGLVKAIIVM HHHHHHHHHHCCCCCHHHHHCCCCHHHHEECCCCCHHCCCCCCCHHHHHHHHHHHHHHHH VGTPFAASFMGLRTPRAAMIFGGLAGTVSGVSAGLAATDRRLVPYGALIATFHTGVGCLL HCCCHHHHHHHCCCCHHHHHHCCHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHHCCHHHH GPSVLFFATKAVLGA HHHHHHHHHHHHHCC >Mature Secondary Structure MIDMLGKVVAHNGLVASFALVGCVMFASAALSKKLTLGRVHGSAIAIVIGLALAYLGGAY CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC TGGEKGIADVPLFAGVGLMGGAMLRDFAIVATAFEVQPAEARKAGLVGVVSLLLGTVLPF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH IVGASVARAFGYSDAVSMTTIGAGAVTYIVGPVTGAAIGASSDVIALSIATGLVKAIIVM HHHHHHHHHHCCCCCHHHHHCCCCHHHHEECCCCCHHCCCCCCCHHHHHHHHHHHHHHHH VGTPFAASFMGLRTPRAAMIFGGLAGTVSGVSAGLAATDRRLVPYGALIATFHTGVGCLL HCCCHHHHHHHCCCCHHHHHHCCHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHHCCHHHH GPSVLFFATKAVLGA HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA