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The map label for this gene is secB [H]

Identifier: 83718724

GI number: 83718724

Start: 465222

End: 465695

Strand: Direct

Name: secB [H]

Synonym: BTH_I0419

Alternate gene names: 83718724

Gene position: 465222-465695 (Clockwise)

Preceding gene: 83720232

Following gene: 83721337

Centisome position: 12.21

GC content: 62.87

Gene sequence:

>474_bases
ATGTCCGACGTCGAAAACCAACCGTTCTTCAACATCCAGCGCATTTACCTGAAGGATCTGTCGCTCGAGCAGCCGAATTC
GCCCGCGATCTTCCTCGAGCAGGAGATGCCCGCCGTTGAAGTCGAGGTCGACGTGAAGGCCGAGCGTCTCGCCGACACCG
TCTACGAGATCGTCGTCGCGGGCACCGTCACCGCGAAGGTGCGCGAGAAGGTCGCGTTTCTCGTCGAGGCGAAGCAGGCT
GGCATTTTCGACATCCGCAACATCCCCGCCGAGCAGATCGATCCGCTTTGCGGCATCGCGTGCCCGACGATCCTGTTCCC
GTACCTGCGCTCGAACATCGCCGATTCGATCACGCGCGCGGGCTTTCCGCCCATCCATCTCGCGGAGATCAACTTCCAGG
CGCTGTACGAGCAGCGCTTGGCCGAGATCGCGCAGCAGCAAGGCGGCGCGCCGAACGGCACGACGCTGAACTGA

Upstream 100 bases:

>100_bases
GCGCGGCCGCCGTCTTGCGGGCGGCGCGCGGTCCAAGCACGATCGCACCGGGCGTGCCGGAGGGTTCCGGCCGCCGCGAA
ATCATTTTTAGGGAGCCACC

Downstream 100 bases:

>100_bases
GTATGAACGACGACCGGTGCTGAGCATGAAAGTCGCTGTTCTCGGCGCCGGCGCGTGGGGCACCGCGCTCGCGGCGCATC
TCGCCGCGCGGCACGACACG

Product: preprotein translocase subunit SecB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MSDVENQPFFNIQRIYLKDLSLEQPNSPAIFLEQEMPAVEVEVDVKAERLADTVYEIVVAGTVTAKVREKVAFLVEAKQA
GIFDIRNIPAEQIDPLCGIACPTILFPYLRSNIADSITRAGFPPIHLAEINFQALYEQRLAEIAQQQGGAPNGTTLN

Sequences:

>Translated_157_residues
MSDVENQPFFNIQRIYLKDLSLEQPNSPAIFLEQEMPAVEVEVDVKAERLADTVYEIVVAGTVTAKVREKVAFLVEAKQA
GIFDIRNIPAEQIDPLCGIACPTILFPYLRSNIADSITRAGFPPIHLAEINFQALYEQRLAEIAQQQGGAPNGTTLN
>Mature_156_residues
SDVENQPFFNIQRIYLKDLSLEQPNSPAIFLEQEMPAVEVEVDVKAERLADTVYEIVVAGTVTAKVREKVAFLVEAKQAG
IFDIRNIPAEQIDPLCGIACPTILFPYLRSNIADSITRAGFPPIHLAEINFQALYEQRLAEIAQQQGGAPNGTTLN

Specific function: One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its r

COG id: COG1952

COG function: function code U; Preprotein translocase subunit SecB

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secB family [H]

Homologues:

Organism=Escherichia coli, GI1790038, Length=140, Percent_Identity=45.7142857142857, Blast_Score=128, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003708 [H]

Pfam domain/function: PF02556 SecB [H]

EC number: NA

Molecular weight: Translated: 17372; Mature: 17241

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDVENQPFFNIQRIYLKDLSLEQPNSPAIFLEQEMPAVEVEVDVKAERLADTVYEIVVA
CCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHH
GTVTAKVREKVAFLVEAKQAGIFDIRNIPAEQIDPLCGIACPTILFPYLRSNIADSITRA
HHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC
GFPPIHLAEINFQALYEQRLAEIAQQQGGAPNGTTLN
CCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SDVENQPFFNIQRIYLKDLSLEQPNSPAIFLEQEMPAVEVEVDVKAERLADTVYEIVVA
CCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHH
GTVTAKVREKVAFLVEAKQAGIFDIRNIPAEQIDPLCGIACPTILFPYLRSNIADSITRA
HHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC
GFPPIHLAEINFQALYEQRLAEIAQQQGGAPNGTTLN
CCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA