| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is yebQ [H]
Identifier: 83718711
GI number: 83718711
Start: 1030104
End: 1031477
Strand: Reverse
Name: yebQ [H]
Synonym: BTH_I0903
Alternate gene names: 83718711
Gene position: 1031477-1030104 (Counterclockwise)
Preceding gene: 83719563
Following gene: 83720858
Centisome position: 27.08
GC content: 71.18
Gene sequence:
>1374_bases ATGAACGCCGACTCCGGACTGCCGCTCCCGCAACGCTACTGGGCGATCGTTTGCGTCGCGCTGGGCATCACGCTCGCCGT GCTCGACGGCGCGATCGCGAACGTCGCGCTGCCGACGATCGCCCGCGATCTGCGCGCCTCCGACGCCGCGTCGATCTGGA TCGTCAACGCGTACCAGCTCGCCGTCACGATCTCGCTGCTGCCGCTCGCGTCGCTCGGCGACCGGATCGGCTACCGGCGC GTCTACATCGCGGGGCTCGCGCTCTTCACCGCGGCGTCGCTCGGCTGCGCGCTGTCGAGCACGCTGCCCGCGCTCGCGAC GCTGCGCGTGATCCAGGGCTTCGGCGCGGCCGGCATCATGAGCGTCAATACCGCGCTCGTGCGGATGATCTATCCGTCGT CGCAGCTCGGGCGCGGCGTCGCGATCAACGCGATGGTCGTTGCGCTGTCGTCGGCCGTCGGGCCGACCATCGCGTCCGCC GTGCTCGCCGTCGCGCCGTGGCCGTGGCTCTTCGCGATCAACGTGCCGATCGGCGTCGCCGCCGTGTACGGCAGCCTGCG CGCGCTGCCCGTGAATCCGGGCCGCGACGCGCCGTACGATTTCGTCAGCGCCATGATGAACGCATGCGTGTTCGGGCTGC TGATCGTGTCCGTCGACGGGCTCGGCCACGGCGAAGATCGCGTGAGCGTCGCGCTCACCGCGCTCGCGGCCGTCGTGATC GGCTACTTCTTCGTCAGGCGACAGCTGACACAGCCTGCGCCGCTCTTGCCCGTCGATCTGCTGCGCATCCCGATCTTCGC GCTGTCGATCAGCACATCGGTCGCGTCGTTCACGTCGCAGATGCTCGCGTTCGTCGCGCTGCCGTTCTGGCTGCAAAACA CGCTCGGCTTCTCGCAGGTGCAGACGGGGCTCTACATGACGCCGTGGCCGCTCGTGATCGTGGTCGCCGCGCCGCTCGCG GGCGTGCTGTCCGACCGCTATTCGGCGGGCGCGCTCGGCGGCGTCGGCCTCGCACTCTTCGCATCGGGCCTGCTCGCGCT CGCGACGATCGGCGCGCACCCGACGCCCGTCGACATCGTGTGGCGCATGGCGCTGTGCGGCGCGGGCTTCGGGCTTTTTC AGTCGCCGAACAATCGCGCGATCCTGTCGGCCGCGCCGCGCGAGCGCGCGGGCGGCGCGAGCGGGATGCTCGGCACCGCG CGGCTCACCGGGCAGACGTTCGGCGCCGCGCTCGTCGCGCTGATCTTCGGCGTCGCGCCGCAGCACGGGCCGACGATCGC GCTCTACACCGCGACGGCGTTCGCCGCCGTCGCGGCAACCGTGAGCCTGATGCGAATCCGCGCGCAGCGCGACACGACCA CCGCGGCAAACTGA
Upstream 100 bases:
>100_bases TCCGCCCGGCCCTTCGCCGCCGGCCGCGCGACTCGGCGCGCATGCCGGCGGCCGCGTCCGCAACGTACTCGCCGCCCCTC GCCTCGCCATCGCCTCCGTC
Downstream 100 bases:
>100_bases GCGCCGCGAAGCCGGTCACTGGCGGCCACAGGCACCGCTAGCGGCCATCTACGCCAACGCGTGGCGGCACATGTCAGCAC ATGTCGACGCGCGGCGGCTG
Product: EmrB/QacA family drug resistance transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 457; Mature: 457
Protein sequence:
>457_residues MNADSGLPLPQRYWAIVCVALGITLAVLDGAIANVALPTIARDLRASDAASIWIVNAYQLAVTISLLPLASLGDRIGYRR VYIAGLALFTAASLGCALSSTLPALATLRVIQGFGAAGIMSVNTALVRMIYPSSQLGRGVAINAMVVALSSAVGPTIASA VLAVAPWPWLFAINVPIGVAAVYGSLRALPVNPGRDAPYDFVSAMMNACVFGLLIVSVDGLGHGEDRVSVALTALAAVVI GYFFVRRQLTQPAPLLPVDLLRIPIFALSISTSVASFTSQMLAFVALPFWLQNTLGFSQVQTGLYMTPWPLVIVVAAPLA GVLSDRYSAGALGGVGLALFASGLLALATIGAHPTPVDIVWRMALCGAGFGLFQSPNNRAILSAAPRERAGGASGMLGTA RLTGQTFGAALVALIFGVAPQHGPTIALYTATAFAAVAATVSLMRIRAQRDTTTAAN
Sequences:
>Translated_457_residues MNADSGLPLPQRYWAIVCVALGITLAVLDGAIANVALPTIARDLRASDAASIWIVNAYQLAVTISLLPLASLGDRIGYRR VYIAGLALFTAASLGCALSSTLPALATLRVIQGFGAAGIMSVNTALVRMIYPSSQLGRGVAINAMVVALSSAVGPTIASA VLAVAPWPWLFAINVPIGVAAVYGSLRALPVNPGRDAPYDFVSAMMNACVFGLLIVSVDGLGHGEDRVSVALTALAAVVI GYFFVRRQLTQPAPLLPVDLLRIPIFALSISTSVASFTSQMLAFVALPFWLQNTLGFSQVQTGLYMTPWPLVIVVAAPLA GVLSDRYSAGALGGVGLALFASGLLALATIGAHPTPVDIVWRMALCGAGFGLFQSPNNRAILSAAPRERAGGASGMLGTA RLTGQTFGAALVALIFGVAPQHGPTIALYTATAFAAVAATVSLMRIRAQRDTTTAAN >Mature_457_residues MNADSGLPLPQRYWAIVCVALGITLAVLDGAIANVALPTIARDLRASDAASIWIVNAYQLAVTISLLPLASLGDRIGYRR VYIAGLALFTAASLGCALSSTLPALATLRVIQGFGAAGIMSVNTALVRMIYPSSQLGRGVAINAMVVALSSAVGPTIASA VLAVAPWPWLFAINVPIGVAAVYGSLRALPVNPGRDAPYDFVSAMMNACVFGLLIVSVDGLGHGEDRVSVALTALAAVVI GYFFVRRQLTQPAPLLPVDLLRIPIFALSISTSVASFTSQMLAFVALPFWLQNTLGFSQVQTGLYMTPWPLVIVVAAPLA GVLSDRYSAGALGGVGLALFASGLLALATIGAHPTPVDIVWRMALCGAGFGLFQSPNNRAILSAAPRERAGGASGMLGTA RLTGQTFGAALVALIFGVAPQHGPTIALYTATAFAAVAATVSLMRIRAQRDTTTAAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]
Homologues:
Organism=Escherichia coli, GI87081983, Length=449, Percent_Identity=57.4610244988864, Blast_Score=492, Evalue=1e-140, Organism=Escherichia coli, GI1790195, Length=307, Percent_Identity=30.6188925081433, Blast_Score=115, Evalue=4e-27, Organism=Escherichia coli, GI1789042, Length=407, Percent_Identity=25.5528255528256, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1788392, Length=306, Percent_Identity=29.7385620915033, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI1788710, Length=416, Percent_Identity=25, Blast_Score=100, Evalue=3e-22, Organism=Saccharomyces cerevisiae, GI6325455, Length=145, Percent_Identity=31.7241379310345, Blast_Score=68, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 47096; Mature: 47096
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNADSGLPLPQRYWAIVCVALGITLAVLDGAIANVALPTIARDLRASDAASIWIVNAYQL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEE AVTISLLPLASLGDRIGYRRVYIAGLALFTAASLGCALSSTLPALATLRVIQGFGAAGIM EHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH SVNTALVRMIYPSSQLGRGVAINAMVVALSSAVGPTIASAVLAVAPWPWLFAINVPIGVA HHHHHHHHHCCCCHHHCCCEEHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCHHHH AVYGSLRALPVNPGRDAPYDFVSAMMNACVFGLLIVSVDGLGHGEDRVSVALTALAAVVI HHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH GYFFVRRQLTQPAPLLPVDLLRIPIFALSISTSVASFTSQMLAFVALPFWLQNTLGFSQV HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH QTGLYMTPWPLVIVVAAPLAGVLSDRYSAGALGGVGLALFASGLLALATIGAHPTPVDIV HCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHH WRMALCGAGFGLFQSPNNRAILSAAPRERAGGASGMLGTARLTGQTFGAALVALIFGVAP HHHHHHHCCCCCCCCCCCCEEEECCCCHHCCCCCCCCEEHHHCCHHHHHHHHHHHHHCCC QHGPTIALYTATAFAAVAATVSLMRIRAQRDTTTAAN CCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNADSGLPLPQRYWAIVCVALGITLAVLDGAIANVALPTIARDLRASDAASIWIVNAYQL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEE AVTISLLPLASLGDRIGYRRVYIAGLALFTAASLGCALSSTLPALATLRVIQGFGAAGIM EHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH SVNTALVRMIYPSSQLGRGVAINAMVVALSSAVGPTIASAVLAVAPWPWLFAINVPIGVA HHHHHHHHHCCCCHHHCCCEEHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCHHHH AVYGSLRALPVNPGRDAPYDFVSAMMNACVFGLLIVSVDGLGHGEDRVSVALTALAAVVI HHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH GYFFVRRQLTQPAPLLPVDLLRIPIFALSISTSVASFTSQMLAFVALPFWLQNTLGFSQV HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH QTGLYMTPWPLVIVVAAPLAGVLSDRYSAGALGGVGLALFASGLLALATIGAHPTPVDIV HCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHH WRMALCGAGFGLFQSPNNRAILSAAPRERAGGASGMLGTARLTGQTFGAALVALIFGVAP HHHHHHHCCCCCCCCCCCCEEEECCCCHHCCCCCCCCEEHHHCCHHHHHHHHHHHHHCCC QHGPTIALYTATAFAAVAATVSLMRIRAQRDTTTAAN CCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]