| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
Click here to switch to the map view.
The map label for this gene is 83718686
Identifier: 83718686
GI number: 83718686
Start: 1289962
End: 1290549
Strand: Reverse
Name: 83718686
Synonym: BTH_I1144
Alternate gene names: NA
Gene position: 1290549-1289962 (Counterclockwise)
Preceding gene: 83719033
Following gene: 83721521
Centisome position: 33.88
GC content: 61.56
Gene sequence:
>588_bases ATGCCGCGCCTTTTTTACGAGGCACCCATATTGAAAGCGATTGCTCTTGCCGCCGCGTCGATTGCCGCGGCCGCCGCGCT GGCCGGCTGCGCACATTCGAACACCCCGTCCAACAAGGACGACAGCGAGTTCGTCTACCTGCTCGACCGTCAGCCGCAGT GGACTGAAAACAAGGTCGAGAAGCTGCCGCCGCTGCCGCAAACGAGCGATCTGCTGCCGTTCAACGTATCGCAAAACACG CCGCTCAAGTTCTTCGTCGATTCGAAGTCACTCGACGTCGGCACGGACGGCGTCGTTCGCTACATCGTCGTCGTGACGAG TCCGGCGGGCGCGCGCAACGTCAATTACGAAGGCATTCGCTGCGACACCTACGAATGGCGCCAGTACGCGGGCCTGAACG CCGACCACGACGGCTGGGACCGCACGATCGAGACCGACTGGCAGCGGATCGAGAACGGCGAGCTGAATGCGTACCACGCG GCGCTCTATCAGGACTTCTTCTGCGCGAACAAGATGCCGGCGGCCAAGCGTCCGACGATCATCGAGAACATCCGCTACAA CCGAACGCAACTCAATCAGATCCGCTGA
Upstream 100 bases:
>100_bases AGCACGCTCGACGAAATCCCTCCCCGCCTGATTCTGCGCGACTGACGCGCAGGCACGTTCGACGGGAATGAAAACGCATG ACCGGGCGCGGCATTGAAGG
Downstream 100 bases:
>100_bases TCGGGTGCGGCGCGCTGCGCCGTCGCCTGCGCAGCACGCCGGCGGGTGCGAAATGTCTACGCGCGTCGATACGCGTAGAC ATGCGCGAGCGCGCCGAGAC
Product: lipoprotein
Products: NA
Alternate protein names: Periplasmic Protein
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MPRLFYEAPILKAIALAAASIAAAAALAGCAHSNTPSNKDDSEFVYLLDRQPQWTENKVEKLPPLPQTSDLLPFNVSQNT PLKFFVDSKSLDVGTDGVVRYIVVVTSPAGARNVNYEGIRCDTYEWRQYAGLNADHDGWDRTIETDWQRIENGELNAYHA ALYQDFFCANKMPAAKRPTIIENIRYNRTQLNQIR
Sequences:
>Translated_195_residues MPRLFYEAPILKAIALAAASIAAAAALAGCAHSNTPSNKDDSEFVYLLDRQPQWTENKVEKLPPLPQTSDLLPFNVSQNT PLKFFVDSKSLDVGTDGVVRYIVVVTSPAGARNVNYEGIRCDTYEWRQYAGLNADHDGWDRTIETDWQRIENGELNAYHA ALYQDFFCANKMPAAKRPTIIENIRYNRTQLNQIR >Mature_194_residues PRLFYEAPILKAIALAAASIAAAAALAGCAHSNTPSNKDDSEFVYLLDRQPQWTENKVEKLPPLPQTSDLLPFNVSQNTP LKFFVDSKSLDVGTDGVVRYIVVVTSPAGARNVNYEGIRCDTYEWRQYAGLNADHDGWDRTIETDWQRIENGELNAYHAA LYQDFFCANKMPAAKRPTIIENIRYNRTQLNQIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21981; Mature: 21850
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLFYEAPILKAIALAAASIAAAAALAGCAHSNTPSNKDDSEFVYLLDRQPQWTENKVE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCHHHH KLPPLPQTSDLLPFNVSQNTPLKFFVDSKSLDVGTDGVVRYIVVVTSPAGARNVNYEGIR HCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEE CDTYEWRQYAGLNADHDGWDRTIETDWQRIENGELNAYHAALYQDFFCANKMPAAKRPTI ECCHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHH IENIRYNRTQLNQIR HHHCCCCCHHHCCCC >Mature Secondary Structure PRLFYEAPILKAIALAAASIAAAAALAGCAHSNTPSNKDDSEFVYLLDRQPQWTENKVE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCHHHH KLPPLPQTSDLLPFNVSQNTPLKFFVDSKSLDVGTDGVVRYIVVVTSPAGARNVNYEGIR HCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEE CDTYEWRQYAGLNADHDGWDRTIETDWQRIENGELNAYHAALYQDFFCANKMPAAKRPTI ECCHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHH IENIRYNRTQLNQIR HHHCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA