| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is fct [H]
Identifier: 83718630
GI number: 83718630
Start: 2749034
End: 2751250
Strand: Reverse
Name: fct [H]
Synonym: BTH_I2415
Alternate gene names: 83718630
Gene position: 2751250-2749034 (Counterclockwise)
Preceding gene: 83721564
Following gene: 83721312
Centisome position: 72.23
GC content: 67.66
Gene sequence:
>2217_bases ATGGAGTGGGCAACCAGCACGCGCGTGCGTGCGATCGCGGCCGCGGCAGGCGTGGCGTTCTGCGCGGCGGCGAGTCATGC GCAGGCACAGGCGGTGCGGCCGGGGGCAGACGCGCGGCAGCCGGGCAGTCAGGTGAATGGGGACACTGCGGCGGGCGGCA CGTTGCCCGCGATCTCGGTGTCGGCGGGGGCGGAGCGCGACGCGAGCGTCGGCCTCGTCGCGCGGCGCAGCACCACGGGC ACGAAGACCGATACGCCGATCGTCGAGATCCCGCAGACGATCAACATCGTCACCGCGCAGCAGATCGAGGCGACGGGCGC GACCGACATCAATCAGGCGTTCCGCTACATCCCGGGCTTCTCGACCTACGGATCGGACAACCGCTCGGACTGGTACGCGG CGCTGCGCGGCTTCACGCCGACCGTGTTCGTCGACGGGCTGCAGGTGCCGAACACGATCAACCTGTCGAGCTGGCGCGTC GATCCGTACATGATCGACAGCATCGCCGTGCTGCGCGGCCCGACGTCGGTGCTGTACGGGCAGGGCGACCCGGGCGCGAT CGTCGACGTGCAGAGCAAGCTCGCGAACGGCGAGCGCATTCGCGAGGTCGGCGTGCAGGTGGGCAACTACGCGCGCAAGC AGCTGATGTTCGATATCGGCGACAAGATCGACAAGGATGGCACGCTGTCGTACCGGATCGTCGGCGTCGGCCGCGACGGC AACGCGCAGACGGGGCCGCTCGCCGACCAGCGCGTGTCGTTCGCGCCGTCGCTCAAGTGGCAGCCGAACGCAAACACGTC GCTCACGCTCGCCGCGACGTACCTGCAGGACTGGGGCGACACGTCGAGCAACTTCCTGCCGTCGCGCGGCACCGTGCTGC CGAATCCGAACGGCATGATCTCGGACGACCTGTACACGGCCGATGCGAACTTCGACCACTACCGCAAGAAGCAATGGTCG ATCGGCTATCAGTTCGAGCACAAGCTGAACCCGGTGTGGACGTTCCGGCAGAACGTGCGCTGGATGCACCTGGCGCTCGA CGACGCGTCCGTCTACGGCGGCGGCCTCGACGGCGCGGACCCGACGATGGCGACGATGACGCGCTACGCGGGCCTGTTCC AGTTCAACTACAGCCGCTTCGACGTCGACAACCAGGCGCAGGCGAAATTCACGACAGGCCCGTTGAGCCACACACTGCTG TTCGGCTTCGACTACAACCGGCAGACGACGACCGACAGCGAATGGCTCGCGAAGGGGCCCGGCCTGAACCTGTACCGGCC CGTCTACACGCCGATTCCGGCCGACATCTTCAGCGGGCCGAACGCGTACCCGCGCACCGACACGAAGACGACGCTCAACG CCTTCGGCCTGTACGTGCAGGACCAGATCAAGTGGCAGCGCTGGGTGCTCACGCTCGGCGGCCGGCAGGACTGGACGCGC ACGTCGCAGGACGACATCGCGAACTCGGCGAGCTTCAAGCAGAACGACCACGCGTTCAGCGGGCGCGTCGGCCTGACCTA TCTCGGCGATTACGGCCTCGCGCCGTACCTCAGCTATTCGACGTCGTTCAATCCGCAGATCGGCGTGAAGCTCGCGGGCG GCGGGCTCGCGACGCCGACCAAGGGCCGCCAGATCGAGGCTGGCCTGCGCTGGCAGCCGCCGGGCAAGAACCTGATGCTG AACGCGGCCGTCTACCAGATCAACCAGACGAACGTCGCGATGAGCAATCCGAACGATCCGACGAGCAGCACGTTCGTGCA GGTGGGCGAGGTGCGCTCGCGCGGCGTCGAGCTGAGCGCGGTGGGCAACCTGTCGCGCGAGCTGTCGGTGATCGCCGCGT ACGTCTATCAGGACGTGAAGAACGTGCAGGCGAATGACAACACGCTGAACAAGTGGCCCGTCGACGTGCCGCGCCCGCGC CAGATCGCGTCGCTGTGGGCCGACTGGACGTGGCGCAACGGGCCGCTCACGGGCTTCGGCGTCGGCGCGGGCGTGCGCTA CATGAGCGCGGCGGCGGGCGCCGCCGACAACTCGCTGACGGTGCCGAGCTACACGCTGTTCGACGCGGCGCTGCACTACG AGCTGCGCAACTGGCGCTTCGCGCTCAATGCGACGAACCTGTTCAACCGCCGCTACGTGGCCGGCTGCCAGTCGGATTCG GTGTGCATGTACGGCAACCAGCGCACCGTGATCGCGACGGCGAAATACAACTGGTAA
Upstream 100 bases:
>100_bases GCACGACACGATAACAACGGGGTGAGCGACGGCCGGCTGGCCATCGCTCTTTGATGAAGGTGCGGCCTCGCGGCCGCTTT GCAACTTGGAGCAACGGAAG
Downstream 100 bases:
>100_bases GCGCGTTTCATCATCCCATGGGCGGCGCGGCCGCGCGCCGCCCGAACGAGAGGACAACACCGCGATGGCAAGGAAGAAAC TCGTCTACATCTGGTCGCTG
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 738; Mature: 738
Protein sequence:
>738_residues MEWATSTRVRAIAAAAGVAFCAAASHAQAQAVRPGADARQPGSQVNGDTAAGGTLPAISVSAGAERDASVGLVARRSTTG TKTDTPIVEIPQTINIVTAQQIEATGATDINQAFRYIPGFSTYGSDNRSDWYAALRGFTPTVFVDGLQVPNTINLSSWRV DPYMIDSIAVLRGPTSVLYGQGDPGAIVDVQSKLANGERIREVGVQVGNYARKQLMFDIGDKIDKDGTLSYRIVGVGRDG NAQTGPLADQRVSFAPSLKWQPNANTSLTLAATYLQDWGDTSSNFLPSRGTVLPNPNGMISDDLYTADANFDHYRKKQWS IGYQFEHKLNPVWTFRQNVRWMHLALDDASVYGGGLDGADPTMATMTRYAGLFQFNYSRFDVDNQAQAKFTTGPLSHTLL FGFDYNRQTTTDSEWLAKGPGLNLYRPVYTPIPADIFSGPNAYPRTDTKTTLNAFGLYVQDQIKWQRWVLTLGGRQDWTR TSQDDIANSASFKQNDHAFSGRVGLTYLGDYGLAPYLSYSTSFNPQIGVKLAGGGLATPTKGRQIEAGLRWQPPGKNLML NAAVYQINQTNVAMSNPNDPTSSTFVQVGEVRSRGVELSAVGNLSRELSVIAAYVYQDVKNVQANDNTLNKWPVDVPRPR QIASLWADWTWRNGPLTGFGVGAGVRYMSAAAGAADNSLTVPSYTLFDAALHYELRNWRFALNATNLFNRRYVAGCQSDS VCMYGNQRTVIATAKYNW
Sequences:
>Translated_738_residues MEWATSTRVRAIAAAAGVAFCAAASHAQAQAVRPGADARQPGSQVNGDTAAGGTLPAISVSAGAERDASVGLVARRSTTG TKTDTPIVEIPQTINIVTAQQIEATGATDINQAFRYIPGFSTYGSDNRSDWYAALRGFTPTVFVDGLQVPNTINLSSWRV DPYMIDSIAVLRGPTSVLYGQGDPGAIVDVQSKLANGERIREVGVQVGNYARKQLMFDIGDKIDKDGTLSYRIVGVGRDG NAQTGPLADQRVSFAPSLKWQPNANTSLTLAATYLQDWGDTSSNFLPSRGTVLPNPNGMISDDLYTADANFDHYRKKQWS IGYQFEHKLNPVWTFRQNVRWMHLALDDASVYGGGLDGADPTMATMTRYAGLFQFNYSRFDVDNQAQAKFTTGPLSHTLL FGFDYNRQTTTDSEWLAKGPGLNLYRPVYTPIPADIFSGPNAYPRTDTKTTLNAFGLYVQDQIKWQRWVLTLGGRQDWTR TSQDDIANSASFKQNDHAFSGRVGLTYLGDYGLAPYLSYSTSFNPQIGVKLAGGGLATPTKGRQIEAGLRWQPPGKNLML NAAVYQINQTNVAMSNPNDPTSSTFVQVGEVRSRGVELSAVGNLSRELSVIAAYVYQDVKNVQANDNTLNKWPVDVPRPR QIASLWADWTWRNGPLTGFGVGAGVRYMSAAAGAADNSLTVPSYTLFDAALHYELRNWRFALNATNLFNRRYVAGCQSDS VCMYGNQRTVIATAKYNW >Mature_738_residues MEWATSTRVRAIAAAAGVAFCAAASHAQAQAVRPGADARQPGSQVNGDTAAGGTLPAISVSAGAERDASVGLVARRSTTG TKTDTPIVEIPQTINIVTAQQIEATGATDINQAFRYIPGFSTYGSDNRSDWYAALRGFTPTVFVDGLQVPNTINLSSWRV DPYMIDSIAVLRGPTSVLYGQGDPGAIVDVQSKLANGERIREVGVQVGNYARKQLMFDIGDKIDKDGTLSYRIVGVGRDG NAQTGPLADQRVSFAPSLKWQPNANTSLTLAATYLQDWGDTSSNFLPSRGTVLPNPNGMISDDLYTADANFDHYRKKQWS IGYQFEHKLNPVWTFRQNVRWMHLALDDASVYGGGLDGADPTMATMTRYAGLFQFNYSRFDVDNQAQAKFTTGPLSHTLL FGFDYNRQTTTDSEWLAKGPGLNLYRPVYTPIPADIFSGPNAYPRTDTKTTLNAFGLYVQDQIKWQRWVLTLGGRQDWTR TSQDDIANSASFKQNDHAFSGRVGLTYLGDYGLAPYLSYSTSFNPQIGVKLAGGGLATPTKGRQIEAGLRWQPPGKNLML NAAVYQINQTNVAMSNPNDPTSSTFVQVGEVRSRGVELSAVGNLSRELSVIAAYVYQDVKNVQANDNTLNKWPVDVPRPR QIASLWADWTWRNGPLTGFGVGAGVRYMSAAAGAADNSLTVPSYTLFDAALHYELRNWRFALNATNLFNRRYVAGCQSDS VCMYGNQRTVIATAKYNW
Specific function: Involved in the initial step of iron uptake by binding chrysobactin, an iron chelatin siderophore that allows the bacteria to extract iron from the environment [H]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=770, Percent_Identity=34.8051948051948, Blast_Score=387, Evalue=1e-108, Organism=Escherichia coli, GI1787024, Length=734, Percent_Identity=23.7057220708447, Blast_Score=133, Evalue=4e-32, Organism=Escherichia coli, GI1787344, Length=727, Percent_Identity=22.1458046767538, Blast_Score=79, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 80569; Mature: 80569
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEWATSTRVRAIAAAAGVAFCAAASHAQAQAVRPGADARQPGSQVNGDTAAGGTLPAISV CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEE SAGAERDASVGLVARRSTTGTKTDTPIVEIPQTINIVTAQQIEATGATDINQAFRYIPGF CCCCCCCCCEEEEEECCCCCCCCCCCEEECCCEEEEEEEEEECCCCCCCHHHHHHHCCCC STYGSDNRSDWYAALRGFTPTVFVDGLQVPNTINLSSWRVDPYMIDSIAVLRGPTSVLYG CCCCCCCCHHHHHHHHCCCCEEEEECCCCCCEECCCEEECCCEEECEEEEECCCCEEEEE QGDPGAIVDVQSKLANGERIREVGVQVGNYARKQLMFDIGDKIDKDGTLSYRIVGVGRDG CCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCC NAQTGPLADQRVSFAPSLKWQPNANTSLTLAATYLQDWGDTSSNFLPSRGTVLPNPNGMI CCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCC SDDLYTADANFDHYRKKQWSIGYQFEHKLNPVWTFRQNVRWMHLALDDASVYGGGLDGAD CCCEEEECCCCHHHHHHHCCCCEEEECCCCCEEEECCCCEEEEEEEECCCEECCCCCCCC PTMATMTRYAGLFQFNYSRFDVDNQAQAKFTTGPLSHTLLFGFDYNRQTTTDSEWLAKGP CHHHHHHHHHHEEEECCEEECCCCCCCEEEECCCCCEEEEEEEECCCCCCCCHHHHHCCC GLNLYRPVYTPIPADIFSGPNAYPRTDTKTTLNAFGLYVQDQIKWQRWVLTLGGRQDWTR CCCEECCCCCCCCHHHHCCCCCCCCCCCCHHHHHHEEEEEECCCEEEEEEEECCCCCCCC TSQDDIANSASFKQNDHAFSGRVGLTYLGDYGLAPYLSYSTSFNPQIGVKLAGGGLATPT CCHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCCCCEEEEECCCCCCCCC KGRQIEAGLRWQPPGKNLMLNAAVYQINQTNVAMSNPNDPTSSTFVQVGEVRSRGVELSA CCCEEECCCEECCCCCCEEEEEEEEEEECCEEEECCCCCCCCHHHEEECHHHHCCEEEEE VGNLSRELSVIAAYVYQDVKNVQANDNTLNKWPVDVPRPRQIASLWADWTWRNGPLTGFG CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEECCCCCCEEE VGAGVRYMSAAAGAADNSLTVPSYTLFDAALHYELRNWRFALNATNLFNRRYVAGCQSDS CCCCHHHHHHHCCCCCCCEECCCHHHHHHHHHEEECCEEEEEECHHHHCCEEEECCCCCC VCMYGNQRTVIATAKYNW EEEECCCEEEEEEEECCC >Mature Secondary Structure MEWATSTRVRAIAAAAGVAFCAAASHAQAQAVRPGADARQPGSQVNGDTAAGGTLPAISV CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEE SAGAERDASVGLVARRSTTGTKTDTPIVEIPQTINIVTAQQIEATGATDINQAFRYIPGF CCCCCCCCCEEEEEECCCCCCCCCCCEEECCCEEEEEEEEEECCCCCCCHHHHHHHCCCC STYGSDNRSDWYAALRGFTPTVFVDGLQVPNTINLSSWRVDPYMIDSIAVLRGPTSVLYG CCCCCCCCHHHHHHHHCCCCEEEEECCCCCCEECCCEEECCCEEECEEEEECCCCEEEEE QGDPGAIVDVQSKLANGERIREVGVQVGNYARKQLMFDIGDKIDKDGTLSYRIVGVGRDG CCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCC NAQTGPLADQRVSFAPSLKWQPNANTSLTLAATYLQDWGDTSSNFLPSRGTVLPNPNGMI CCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCC SDDLYTADANFDHYRKKQWSIGYQFEHKLNPVWTFRQNVRWMHLALDDASVYGGGLDGAD CCCEEEECCCCHHHHHHHCCCCEEEECCCCCEEEECCCCEEEEEEEECCCEECCCCCCCC PTMATMTRYAGLFQFNYSRFDVDNQAQAKFTTGPLSHTLLFGFDYNRQTTTDSEWLAKGP CHHHHHHHHHHEEEECCEEECCCCCCCEEEECCCCCEEEEEEEECCCCCCCCHHHHHCCC GLNLYRPVYTPIPADIFSGPNAYPRTDTKTTLNAFGLYVQDQIKWQRWVLTLGGRQDWTR CCCEECCCCCCCCHHHHCCCCCCCCCCCCHHHHHHEEEEEECCCEEEEEEEECCCCCCCC TSQDDIANSASFKQNDHAFSGRVGLTYLGDYGLAPYLSYSTSFNPQIGVKLAGGGLATPT CCHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCCCCEEEEECCCCCCCCC KGRQIEAGLRWQPPGKNLMLNAAVYQINQTNVAMSNPNDPTSSTFVQVGEVRSRGVELSA CCCEEECCCEECCCCCCEEEEEEEEEEECCEEEECCCCCCCCHHHEEECHHHHCCEEEEE VGNLSRELSVIAAYVYQDVKNVQANDNTLNKWPVDVPRPRQIASLWADWTWRNGPLTGFG CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEECCCCCCEEE VGAGVRYMSAAAGAADNSLTVPSYTLFDAALHYELRNWRFALNATNLFNRRYVAGCQSDS CCCCHHHHHHHCCCCCCCEECCCHHHHHHHHHEEECCEEEEEECHHHHCCEEEECCCCCC VCMYGNQRTVIATAKYNW EEEECCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8576065 [H]